|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041827 ID=TCONS_00041827|Name=TCONS_00041827|organism=Clytia hemisphaerica|type=transcript|length=1096bp
ATGTAATCTCATGACGTCACCctgaaccaatcaaaatgtTTGTATAAGGA
CATCAAATAGAGAGCTCTTTACCCCTAAAATCTCCGTATAAATGAGGAAG
AAAATCAGagagactaaaaaggagaagTTCATAATTTAACGAGTAAAGCA
AAAAGTCGATCGATTCTAAAATGGGGAAGTTGACATGGTTTTTAGTCGTT
GGATTTGGATGTCTTTCAGTGTTTAATTTTGCACAGTATCAAGAGATCAA
TTCTCGTTTTGAGGAATTACAACAAAATTCTCAACAtaaatttgcctttt
ttgaaacttttttactttattCGCAAGATCATTGCAACTAAAGtctatct
caaaataatttgcagctgagaataaatggctgtaacttttgtctcagcca
tttttgtctcagctgcaaattattttgagacagactttagaccAAAATTG
CTGTCGAATATGTGCAAGCGAGGGTTTATTAGACATCCTGTATAAAACAG
GGTGATGCAGAAATGTCTAGTCTggatcacagacctctacaaaacaaACA
GCAGTATAGGAGCACGGATCCGTTTCAAAAAGCTTCAGTTATAAGTGAGC
ATTTTTGTACGGCAGGTGAGAAAACCAGGACTCGGAGGGATGTTGCAAAC
GATGAAAATGAGGATTGGTCTTCGTTCTTTGATCAACAAAAACTCATCAA
TTTCATACAGAAGCAATCCAATCAACgacttaataaaatagatagaccaa
gaacttcatacaatggctcttaaaaatcttttgttttctattaaTTTTGT
ATTCTTTCATCTTGCCGTCTTTCCACCGTCCGCGTAAGTCATATTACaaa
gaaattagactttttacaagcatctctaaatggtgtaaaatcaattatat
cgaatttctactgaccataaatataattttcgatttttttttgcttacgt
ctgatcgcatttttaatcatcgttctcacaagatatttttcagttttttt
cgacaacactgttgcgcttttcagcgcattttctttaagaacataaacat
ttttgaaagactcTAACTAAGAAAATAAACGTGCGTTCATGGTGCG Run BLAST on NCBI transcript from alignment at sc0003038:3890..4985 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041827 ID=TCONS_00041827|Name=TCONS_00041827|organism=Clytia hemisphaerica|type=transcript|length=1096bp|location=Sequence derived from alignment at sc0003038:3890..4985 (Clytia hemisphaerica)
CGCACCATGAACGCACGTTTATTTTCTTAGTTAgagtctttcaaaaatgt
ttatgttcttaaagaaaatgcgctgaaaagcgcaacagtgttgtcgaaaa
aaactgaaaaatatcttgtgagaacgatgattaaaaatgcgatcagacgt
aagcaaaaaaaaatcgaaaattatatttatggtcagtagaaattcgatat
aattgattttacaccatttagagatgcttgtaaaaagtctaatttctttG
TAATATGACTTACGCGGACGGTGGAAAGACGGCAAGATGAAAGAATACAA
AAttaatagaaaacaaaagatttttaagagccattgtatgaagttcttgg
tctatctattttattaagtcGTTGATTGGATTGCTTCTGTATGAAATTGA
TGAGTTTTTGTTGATCAAAGAACGAAGACCAATCCTCATTTTCATCGTTT
GCAACATCCCTCCGAGTCCTGGTTTTCTCACCTGCCGTACAAAAATGCTC
ACTTATAACTGAAGCTTTTTGAAACGGATCCGTGCTCCTATACTGCTGTt
tgttttgtagaggtctgtgatccAGACTAGACATTTCTGCATCACCCTGT
TTTATACAGGATGTCTAATAAACCCTCGCTTGCACATATTCGACAGCAAT
TTTggtctaaagtctgtctcaaaataatttgcagctgagacaaaaatggc
tgagacaaaagttacagccatttattctcagctgcaaattattttgagat
agaCTTTAGTTGCAATGATCTTGCGaataaagtaaaaaagtttcaaaaaa
ggcaaatttaTGTTGAGAATTTTGTTGTAATTCCTCAAAACGAGAATTGA
TCTCTTGATACTGTGCAAAATTAAACACTGAAAGACATCCAAATCCAACG
ACTAAAAACCATGTCAACTTCCCCATTTTAGAATCGATCGACTTTTTGCT
TTACTCGTTAAATTATGAActtctcctttttagtctctCTGATTTTCTTC
CTCATTTATACGGAGATTTTAGGGGTAAAGAGCTCTCTATTTGATGTCCT
TATACAAacattttgattggttcagGGTGACGTCATGAGATTACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041827-exon-sc0003038-1491911889:3890..4985 | TCONS_00041827-exon-sc0003038-1491911889:3890..4985 | Clytia hemisphaerica | exon |
| TCONS_00041827-exon-sc0003038-1510915933:3890..4985 | TCONS_00041827-exon-sc0003038-1510915933:3890..4985 | Clytia hemisphaerica | exon |
| TCONS_00041827-exon-sc0003038-1575043694:3890..4985 | TCONS_00041827-exon-sc0003038-1575043694:3890..4985 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003038 | supercontig | sc0003038:3890..4985 . |
Blast
The following BLAST results are available for this feature:
|
