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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96422_cuf2 >transcript:BL96422_cuf2-protein ID=transcript:BL96422_cuf2-protein|Name=transcript:BL96422_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=204bp
LDCSGNGRCFTSTDSCQSSCVCWPQWFGDCCELRRPRPIGGDPHLQTLDG
KSYDFHGIGEFWDCKSVSNDFGVQTRMYAYERASLIGGVAVKAGYSVITM
MTLPNATEKDVPDIRIDGELCQLSVGEKYLLNNGTIHLLAQQPSTNATES
GAVIIVSVTFASGGTVSFDVRYSPKMGRQFVNILFSPTATFKGSTEGLCG
LMDD Run BLAST on NCBI mRNA from alignment at Sc0000343:95918..97123+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96422_cuf2 ID=transcript:BL96422_cuf2|Name=transcript:BL96422_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1206bp|location=Sequence derived from alignment at Sc0000343:95918..97123+ (Branchiostoma lanceolatum)
CTTTAGACTGCTCCGGAAATGGACGATGCTTCACATCAACAGACAGCTGT
CAGTCATCCTGTGTCTGTTGGCCTCAGTGGTTCGGCGACTGTTGTGAGCT
ACGCCGTCCCCGTCCTATCGGAGGGGACCCCCATCTCCAGACATTAGACG
GTAAGGATTTTGCACTTTGGTCTTTCAGGTTTACGACATGTGAACATGGA
TTTTTCGTTGTGCGAATTATCTTCTAATATCACAGGGTACATATTAATCA
ATAGCTCAATTGCCGTCGAATATAGATATACACAGGCATGGTATATGACT
AGCCAGGATATTATTAAAGAGAAACAAATGAATATGTACAACGAATCACC
CTCCCCTACTGACATGATTCACCACTGTAGAAAACCTTCGTGCCTGGTCA
TAGCATCAACGTTTCTCTCTTATAATGCCAATATTTAATTGTTTTCGTGA
TAGGGAAATCGTACGACTTCCATGGCATTGGTGAGTTCTGGGACTGTAAG
AGCGTGTCTAATGACTTCGGCGTGCAGACCCGAATGTACGCGTACGAAAG
GGCTTCTCTGATCGGTGGAGTTGCTGTGAAGGCTGGGTACAGTGTTATCA
CTATGATGACATTACCGAACGCAACGGAAAAGGACGTTCCTGATATAAGG
TAAGGTTTTCCGTGTTCTTTGATTATTGATTATTGTTCACCAAATTTCCC
GTTGATGATTTTGAGCTGCATGTGGCAACAGGTTATTTAGTCAGAGGACT
GAAAATATTCGAATATTCTCAAATGCCATGTTTTTGTCATTACGCCATTT
CAGGATCGATGGTGAACTGTGTCAGCTTTCTGTCGGAGAAAAATATCTCC
TTAACAACGGGACAATACATCTACTCGCCCAGCAGCCATCTACAAACGCC
ACGGAGTCAGGCGCTGTTATCATCGTGTCTGTTACCTTTGCATCAGGTGA
AGTTGTGTAACATTATGATTATGACGTATTTAGTCCACTGAATGCTTTAT
GATATTTTATCCTACACTATTTAGTAATGATTCTCGGGCCAACAATTCGA
ATGATTTTACTTTTATTTCAAAACAACCAGGAGGAACTGTGTCATTTGAC
GTCCGGTACTCACCAAAGATGGGCCGACAGTTTGTGAACATCCTGTTCAG
CCCCACTGCCACGTTCAAGGGCAGCACGGAGGGACTGTGTGGGCTCATGG
ACGACG Coding sequence (CDS) from alignment at Sc0000343:95918..97123+ >transcript:BL96422_cuf2 ID=transcript:BL96422_cuf2|Name=transcript:BL96422_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2448bp|location=Sequence derived from alignment at Sc0000343:95918..97123+ (Branchiostoma lanceolatum)
TTAGACTGCTCCGGAAATGGACGATGCTTCACATCAACAGACAGCTGTCA
GTCATCCTGTGTCTGTTGGCCTCAGTGGTTCGGCGACTGTTGTGAGCTAC
GCCGTCCCCGTCCTATCGGAGGGGACCCCCATCTCCAGACATTAGACGGG
AAATCGTACGACTTCCATGGCATTGGTGAGTTCTGGGACTGTAAGAGCGT
GTCTAATGACTTCGGCGTGCAGACCCGAATGTACGCGTACGAAAGGGCTT
CTCTGATCGGTGGAGTTGCTGTGAAGGCTGGGTACAGTGTTATCACTATG
ATGACATTACCGAACGCAACGGAAAAGGACGTTCCTGATATAAGGATCGA
TGGTGAACTGTGTCAGCTTTCTGTCGGAGAAAAATATCTCCTTAACAACG
GGACAATACATCTACTCGCCCAGCAGCCATCTACAAACGCCACGGAGTCA
GGCGCTGTTATCATCGTGTCTGTTACCTTTGCATCAGGAGGAACTGTGTC
ATTTGACGTCCGGTACTCACCAAAGATGGGCCGACAGTTTGTGAACATCC
TGTTCAGCCCCACTGCCACGTTCAAGGGCAGCACGGAGGGACTGTGTGGG
CTCATGGACGACTTAGACTGCTCCGGAAATGGACGATGCTTCACATCAAC
AGACAGCTGTCAGTCATCCTGTGTCTGTTGGCCTCAGTGGTTCGGCGACT
GTTGTGAGCTACGCCGTCCCCGTCCTATCGGAGGGGACCCCCATCTCCAG
ACATTAGACGGGAAATCGTACGACTTCCATGGCATTGGTGAGTTCTGGGA
CTGTAAGAGCGTGTCTAATGACTTCGGCGTGCAGACCCGAATGTACGCGT
ACGAAAGGGCTTCTCTGATCGGTGGAGTTGCTGTGAAGGCTGGGTACAGT
GTTATCACTATGATGACATTACCGAACGCAACGGAAAAGGACGTTCCTGA
TATAAGGATCGATGGTGAACTGTGTCAGCTTTCTGTCGGAGAAAAATATC
TCCTTAACAACGGGACAATACATCTACTCGCCCAGCAGCCATCTACAAAC
GCCACGGAGTCAGGCGCTGTTATCATCGTGTCTGTTACCTTTGCATCAGG
AGGAACTGTGTCATTTGACGTCCGGTACTCACCAAAGATGGGCCGACAGT
TTGTGAACATCCTGTTCAGCCCCACTGCCACGTTCAAGGGCAGCACGGAG
GGACTGTGTGGGCTCATGGACGACTTAGACTGCTCCGGAAATGGACGATG
CTTCACATCAACAGACAGCTGTCAGTCATCCTGTGTCTGTTGGCCTCAGT
GGTTCGGCGACTGTTGTGAGCTACGCCGTCCCCGTCCTATCGGAGGGGAC
CCCCATCTCCAGACATTAGACGGGAAATCGTACGACTTCCATGGCATTGG
TGAGTTCTGGGACTGTAAGAGCGTGTCTAATGACTTCGGCGTGCAGACCC
GAATGTACGCGTACGAAAGGGCTTCTCTGATCGGTGGAGTTGCTGTGAAG
GCTGGGTACAGTGTTATCACTATGATGACATTACCGAACGCAACGGAAAA
GGACGTTCCTGATATAAGGATCGATGGTGAACTGTGTCAGCTTTCTGTCG
GAGAAAAATATCTCCTTAACAACGGGACAATACATCTACTCGCCCAGCAG
CCATCTACAAACGCCACGGAGTCAGGCGCTGTTATCATCGTGTCTGTTAC
CTTTGCATCAGGAGGAACTGTGTCATTTGACGTCCGGTACTCACCAAAGA
TGGGCCGACAGTTTGTGAACATCCTGTTCAGCCCCACTGCCACGTTCAAG
GGCAGCACGGAGGGACTGTGTGGGCTCATGGACGACTTAGACTGCTCCGG
AAATGGACGATGCTTCACATCAACAGACAGCTGTCAGTCATCCTGTGTCT
GTTGGCCTCAGTGGTTCGGCGACTGTTGTGAGCTACGCCGTCCCCGTCCT
ATCGGAGGGGACCCCCATCTCCAGACATTAGACGGGAAATCGTACGACTT
CCATGGCATTGGTGAGTTCTGGGACTGTAAGAGCGTGTCTAATGACTTCG
GCGTGCAGACCCGAATGTACGCGTACGAAAGGGCTTCTCTGATCGGTGGA
GTTGCTGTGAAGGCTGGGTACAGTGTTATCACTATGATGACATTACCGAA
CGCAACGGAAAAGGACGTTCCTGATATAAGGATCGATGGTGAACTGTGTC
AGCTTTCTGTCGGAGAAAAATATCTCCTTAACAACGGGACAATACATCTA
CTCGCCCAGCAGCCATCTACAAACGCCACGGAGTCAGGCGCTGTTATCAT
CGTGTCTGTTACCTTTGCATCAGGAGGAACTGTGTCATTTGACGTCCGGT
ACTCACCAAAGATGGGCCGACAGTTTGTGAACATCCTGTTCAGCCCCACT
GCCACGTTCAAGGGCAGCACGGAGGGACTGTGTGGGCTCATGGACGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000343 | genome | Sc0000343:95918..97123 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96422_cuf2 |
| Biotype | protein_coding |
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