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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70707_cuf0 >transcript:BL70707_cuf0-protein ID=transcript:BL70707_cuf0-protein|Name=transcript:BL70707_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=631bp
HTSDDDEPLARCVQHTSDDDEPLARCVQHTSDDDEPLARCVQHTSDDDEP
LARCVQHTSDDDEPLARPLAATPTKSETPRKDNKRLLTPQSKSLSLPSSK
VRCRRQEEKRSSVVRGYLLERLEDGGKEDTIHVDQVISQVQTHCKQMAAQ
CSNKEEAEALADADLIQGITVVRAAKACFDFEYKTRRKILVGLRWKPAVL
GHLQVATGTVDQIENIRTLINKVDIELEESWASVSKFGGKQQASSHFADL
WNKRNKLVSTLVRLYKEHAESLTEQSKSGYHLSLEQRTKLSEEMKRFENM
VNLGVRDRVIDDVPETFFGQLAESLEERCPLIHSILWTLVVTDRSASNKL
KTNAVKLKSATHALCGLLDLRSSRANNDVSILFGLVAVSYGAGKQFVSLL
QHLGLSESWDTLMGFMEERLKNFQGIIDRKFGDKEPVIFAYDNINIFRAV
RHMRVLKGKPRMWNFTVRMAVKPDLEGIKELFETKDTAEIPQKPVEDVIV
DDVFIDAHPELAQIWEDAKDSFFLELLDIGLNQLPEDTQLQSHKSPAEQK
AWLSAQSFKSSKTYAIRHKPTKPSNCKKSDITILPLSTENEATLTGTACI
IEEFAQGFSIPIDRKDTQYLPFNENNIQFDI Run BLAST on NCBI mRNA from alignment at Sc0000310:2..1896- Legend: CDSpolypeptideexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70707_cuf0 ID=transcript:BL70707_cuf0|Name=transcript:BL70707_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1895bp|location=Sequence derived from alignment at Sc0000310:2..1896- (Branchiostoma lanceolatum)
CACACATCTGATGACGACGAGCCACTGGCCAGGTGTGTACAACACACATC
TGATGACGACGAGCCACTGGCCAGGTGTGTACAACACACATCTGATGACG
ACGAGCCACTGGCCAGGTGTGTACAACACACATCTGATGACGACGAGCCA
CTGGCCAGGTGTGTACAACACACATCTGATGACGACGAGCCGCTGGCCAG
ACCACTAGCAGCTACACCAACTAAAAGTGAAACACCAAGGAAAGACAATA
AGCGACTCCTGACACCGCAATCCAAGTCCCTGTCTCTGCCTTCTTCAAAA
GTTAGGTGCAGGAGACAGGAGGAAAAAAGGTCTTCAGTTGTAAGGGGATA
CCTGCTGGAAAGGCTGGAGGATGGTGGTAAGGAAGACACAATTCATGTGG
ACCAGGTGATAAGTCAGGTGCAAACTCACTGCAAACAAATGGCTGCACAG
TGTTCCAACAAGGAAGAGGCAGAAGCGTTGGCGGACGCCGACTTGATACA
AGGAATAACAGTTGTTAGAGCGGCAAAAGCTTGCTTTGATTTTGAATACA
AGACGCGTCGCAAGATTCTGGTAGGCTTGAGGTGGAAGCCAGCAGTGCTG
GGTCATCTGCAGGTGGCCACAGGCACAGTAGATCAGATAGAAAACATCAG
AACATTGATCAACAAAGTCGACATCGAGCTAGAGGAAAGCTGGGCAAGTG
TGTCCAAGTTTGGTGGAAAGCAGCAGGCATCTTCACACTTTGCAGACCTG
TGGAACAAAAGGAACAAACTTGTTTCAACTCTTGTGAGGTTGTATAAGGA
ACATGCCGAGAGCCTCACTGAACAATCGAAAAGTGGTTATCACTTGTCTT
TGGAGCAAAGAACAAAGTTGTCGGAAGAAATGAAGAGATTTGAAAACATG
GTAAACCTGGGTGTAAGGGACAGGGTCATCGATGATGTGCCAGAAACATT
CTTTGGCCAGCTGGCTGAATCTCTGGAGGAAAGGTGCCCCCTGATACACT
CCATTTTGTGGACGTTAGTGGTCACAGATAGAAGCGCTAGCAACAAGCTG
AAAACAAATGCTGTAAAGTTGAAGAGTGCAACACACGCACTGTGTGGCCT
GCTGGACTTGCGAAGCTCAAGAGCCAACAACGATGTGAGCATCTTGTTTG
GGCTTGTCGCTGTGTCTTATGGCGCAGGTAAACAGTTTGTGTCACTGTTA
CAGCATCTAGGTTTGTCAGAGAGCTGGGACACTCTAATGGGCTTTATGGA
GGAAAGGCTGAAGAACTTTCAAGGCATCATTGACCGCAAGTTTGGCGATA
AAGAGCCTGTCATATTTGCTTATGACAACATTAACATATTCCGAGCTGTG
CGCCACATGAGAGTGTTGAAGGGTAAGCCTCGGATGTGGAACTTTACTGT
ACGGATGGCAGTGAAACCAGACCTAGAAGGCATCAAGGAACTTTTTGAAA
CAAAGGACACTGCCGAGATACCACAGAAACCTGTAGAAGACGTCATTGTG
GATGACGTTTTCATTGATGCCCACCCTGAATTGGCACAGATATGGGAAGA
TGCCAAGGACAGTTTTTTCCTTGAGCTTCTAGACATAGGTCTGAACCAAC
TACCGGAAGACACACAACTACAGTCACACAAATCCCCAGCAGAACAGAAG
GCCTGGCTGTCAGCACAGTCATTCAAAAGCTCCAAAACATATGCCATCCG
ACACAAACCAACAAAGCCATCCAACTGTAAGAAATCAGACATCACCATAC
TTCCACTCTCAACAGAAAATGAAGCCACTTTAACTGGGACAGCTTGCATC
ATTGAGGAGTTTGCTCAAGGGTTCAGCATTCCAATTGACAGAAAAGACAC
ACAGTACCTGCCCTTTAATGAAAACAACATCCAGTTTGACATCAC Coding sequence (CDS) from alignment at Sc0000310:2..1896- >transcript:BL70707_cuf0 ID=transcript:BL70707_cuf0|Name=transcript:BL70707_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1893bp|location=Sequence derived from alignment at Sc0000310:2..1896- (Branchiostoma lanceolatum)
CACACATCTGATGACGACGAGCCACTGGCCAGGTGTGTACAACACACATC
TGATGACGACGAGCCACTGGCCAGGTGTGTACAACACACATCTGATGACG
ACGAGCCACTGGCCAGGTGTGTACAACACACATCTGATGACGACGAGCCA
CTGGCCAGGTGTGTACAACACACATCTGATGACGACGAGCCGCTGGCCAG
ACCACTAGCAGCTACACCAACTAAAAGTGAAACACCAAGGAAAGACAATA
AGCGACTCCTGACACCGCAATCCAAGTCCCTGTCTCTGCCTTCTTCAAAA
GTTAGGTGCAGGAGACAGGAGGAAAAAAGGTCTTCAGTTGTAAGGGGATA
CCTGCTGGAAAGGCTGGAGGATGGTGGTAAGGAAGACACAATTCATGTGG
ACCAGGTGATAAGTCAGGTGCAAACTCACTGCAAACAAATGGCTGCACAG
TGTTCCAACAAGGAAGAGGCAGAAGCGTTGGCGGACGCCGACTTGATACA
AGGAATAACAGTTGTTAGAGCGGCAAAAGCTTGCTTTGATTTTGAATACA
AGACGCGTCGCAAGATTCTGGTAGGCTTGAGGTGGAAGCCAGCAGTGCTG
GGTCATCTGCAGGTGGCCACAGGCACAGTAGATCAGATAGAAAACATCAG
AACATTGATCAACAAAGTCGACATCGAGCTAGAGGAAAGCTGGGCAAGTG
TGTCCAAGTTTGGTGGAAAGCAGCAGGCATCTTCACACTTTGCAGACCTG
TGGAACAAAAGGAACAAACTTGTTTCAACTCTTGTGAGGTTGTATAAGGA
ACATGCCGAGAGCCTCACTGAACAATCGAAAAGTGGTTATCACTTGTCTT
TGGAGCAAAGAACAAAGTTGTCGGAAGAAATGAAGAGATTTGAAAACATG
GTAAACCTGGGTGTAAGGGACAGGGTCATCGATGATGTGCCAGAAACATT
CTTTGGCCAGCTGGCTGAATCTCTGGAGGAAAGGTGCCCCCTGATACACT
CCATTTTGTGGACGTTAGTGGTCACAGATAGAAGCGCTAGCAACAAGCTG
AAAACAAATGCTGTAAAGTTGAAGAGTGCAACACACGCACTGTGTGGCCT
GCTGGACTTGCGAAGCTCAAGAGCCAACAACGATGTGAGCATCTTGTTTG
GGCTTGTCGCTGTGTCTTATGGCGCAGGTAAACAGTTTGTGTCACTGTTA
CAGCATCTAGGTTTGTCAGAGAGCTGGGACACTCTAATGGGCTTTATGGA
GGAAAGGCTGAAGAACTTTCAAGGCATCATTGACCGCAAGTTTGGCGATA
AAGAGCCTGTCATATTTGCTTATGACAACATTAACATATTCCGAGCTGTG
CGCCACATGAGAGTGTTGAAGGGTAAGCCTCGGATGTGGAACTTTACTGT
ACGGATGGCAGTGAAACCAGACCTAGAAGGCATCAAGGAACTTTTTGAAA
CAAAGGACACTGCCGAGATACCACAGAAACCTGTAGAAGACGTCATTGTG
GATGACGTTTTCATTGATGCCCACCCTGAATTGGCACAGATATGGGAAGA
TGCCAAGGACAGTTTTTTCCTTGAGCTTCTAGACATAGGTCTGAACCAAC
TACCGGAAGACACACAACTACAGTCACACAAATCCCCAGCAGAACAGAAG
GCCTGGCTGTCAGCACAGTCATTCAAAAGCTCCAAAACATATGCCATCCG
ACACAAACCAACAAAGCCATCCAACTGTAAGAAATCAGACATCACCATAC
TTCCACTCTCAACAGAAAATGAAGCCACTTTAACTGGGACAGCTTGCATC
ATTGAGGAGTTTGCTCAAGGGTTCAGCATTCCAATTGACAGAAAAGACAC
ACAGTACCTGCCCTTTAATGAAAACAACATCCAGTTTGACATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000310 | genome | Sc0000310:2..1896 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70707_cuf0 |
| Biotype | protein_coding |
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