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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL70615_cuf0 >transcript:BL70615_cuf0-protein ID=transcript:BL70615_cuf0-protein|Name=transcript:BL70615_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=120bp
KALYKAKMGKFAAEMDKEKEQWMKTYMKVTEDGTYWKYGNVPRGDRTMIF
DKEEQTCKLSRSADDFLKSTFEMTGDGAMTLQTRGGFIMLIKVTGNKMKI
SQSMGEFSYDTMYTKCTCPE Run BLAST on NCBI mRNA from alignment at Sc0000291:22137..25899- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL70615_cuf0 ID=transcript:BL70615_cuf0|Name=transcript:BL70615_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3763bp|location=Sequence derived from alignment at Sc0000291:22137..25899- (Branchiostoma lanceolatum)
TGAAGGCACTGTACAAGGCCAAAATGGGTATGTATCTTTATGCCATTTTC
TAGCTGTTTTTATGGTAAATGCAGCTATAACAAGAGTTCCACGACCTCAT
ATCTCCATGAACAATTCTATTCATGCAAATGACTTACACATTTGCATAAT
ATATGCTTGGTCATAAACACCCTTATCTAACTTAAACATGTTGCAATATT
GACAGTCCTGTAATTTTCCAATTAGATGAATTATGATGTTTTGCATTAAT
TATGCAAATTTGGAATTTATTTGCATAATCCGTATCTGTTGATGCTCCAC
TTTCCATAAACTACAAATGTTACATGTATTTGAGTCTGATAAAGGAAAAC
ACTGCAAATGTAGATTTTGCTCATTATCTATGCAAATTAAGTCACAATTA
GCATAATTTGCACTTCATTATGTATATCTCTGTCTAAGCTACCTGCATAC
TAAGTATCATATTGACAGTCCTATAATTTTCCAATTAGATGAGATATGGT
GTTTTGCATTAATTATGCAAATTAGGAATTTATTTGCATAATTGGTATCT
GTTGATGATCCACTTTCCATAAACTACATACGTTACATGTATTTGAGTCT
GATAATGGAAAACACTGCAAATATAGATTTTCCTCATTAGCTATGCAAAT
TAAGTCACAATTAGCATAATTTGCACTTCATTATGTATATCTCTGTCTAA
GCTACCTGCATACTAAGTATCATATTGACAGTCCTACAATTTTCCAATAA
GATGAGATATGGTATTTTTTAAAAATTATGCAAATTATGAATTTATTTGC
ATAATTGGTATCTGTTGATGATCCACTTTCCATAAACTACATATGTTACA
TGTATTTGAGTCTGATAATGGAAAACACTGCAAATACACATTTACCTCAT
TAGTTATGCAAATAAGGTGCTAATTAACATTATTTGCACTTCATTGTGTA
CATCCCTGTCTAAGCTACCTGTATACTAAATATCATGGAAATCCATCGTT
CCTTTGTTCAGTTATTTCCCTTAGAAGATTTTCACGATAACGCCTCTGTA
GTTCTAGAGCAAGCTGCTAGGGGGCCCAAACCCACACCACGTCTCCATGA
CACCACAAGCTATCTGCCACCAAAAAATCAAGACCATAGCACGTTCAGGT
CAAGAGATACAAAAATGGAATTTCTGCTGCAGTACCAAGGTCATATACCA
GGGGGCCCAAAATTGACCTTGAATTTCGGCTTCACAACACCTACTTACAT
ACCAAATATCATCGTAATTCATCAAGAGGTTCTTGAGTTATGCTGACTAC
AGTGGTCCGGAAACACAAACAAACAGACAGACACACAGACACACCCAAAA
CTATATCTCCATTTTCCATGGAGATAATAACATACCTGTGTAACTACCAT
GATAACATACCTACGTGTTATAGGCGCCTTTTTACATAATACAGATTATT
CATCATTGTGAAATGGATGTTTTACTTCAAAGGTAAATTTGCAGCTGAAA
TGGACAAGGAAAAAGAGCAGTGGATGAAAACGTACATGAAAGTGACAGAA
GACGGCACCTATTGGAAGGTTTACTTGTTTGTTTATTGTTTATTCATGAG
CCCTAAACAACACACTGAAAACACATCATCAGTACAAGTGTTCCATGACC
TCATACCTTCGCCAAATGATTTTAACCTTTATGATGGCGTACTGTAGGCG
TTTCTCATTGATTACACATCATACCAGTTTATAATTTTATAACAGAAGTT
GTCCAAAGTAGGAGCTTAACAATGAAGGTTATGCTAATGTTAATCATCAA
TGATGCAAATGAGGTCCTTATCAGCCTGATTTAATTCAACGATCTTCACA
TTAACACGCATTTTTGGTAGTAAATTTCCTGTCTTTATCAAAGAATGTCC
CTTTTGGCATGTGCCGATATTTATACAGGAACCGAGCAGTGGATATACGT
CCGAGATAGTTCATGGAGTCCCCCGTCTCGGTTGAAGAATGGGTTAATTA
TCCTAATGTTTACTTTAATGATATTACTTTTTTCTAGTATGGTAATGTAC
CACGGGGAGATAGAACCATGATCTTTGACAAGGAAGAACAAACTTGCAAG
CTCAGCAGAAGTGCAGATGATTTCTTAAAGGTAAAAGAAAGTATTTGCAA
TATGATGATATCAAAGTCTTGTCAAAGAACCATCACTCTCATGCAGCCTT
ACAACAGCAACTAGGTTAGATAATGGGGATAACAGCAGTTTTGGTATCAA
TTTTCGTATATGTAAACACACAGATTATCTATATTCTGTTAGTGACGAAA
GGAGGGTAACAAACAGTTGAGTTTATCTTTATTGTTCTCGTTTATTTTGT
TGTGTTTGTTTGTTTGTTGTTGTCTCAGAGCACCTTTGAAATGACGGGTG
ACGGAGCAATGACTTTACAGACTCGTGGAGGTTTCATTATGCTCATCAAG
GTGACTGGCAACAAGATGAAAATCGTAAGTAAATAAGTATATAGCTGTGT
CGTTTTTTCAGTAGTTGTTTGCAACACTCTTTTAACGTAAATCCATTTAC
AGTACGTAGTGTCATATATTTTATGTTGTTCTGTATGTAACCATTTTGTA
TTTCTAATGCTTGCATATGCATGTTCTCGATAGTTTTTCATCGAATTAAT
GTTCACAGAGAGCTAATTCTTCTGCATACCCTATATTTTAATTATAGTAT
GCCTTAAACACTATCCACTTCTTTATGTTCATATTTCACCCCATTACGGA
CGAAACTGAATTGTTTTAAGCGGCACAAGCTACCTTCTGGTAGCGTTAGA
CTTAAGGATAAGGATAAGGACCATGAGAAGAACAGTAGAACAACTATAGC
CTCCTGCTAACAAAACAACGGGGTCAGTTTTCCTATGTGTTTTATCGTAC
AGAAAACAGTTGGGTCTAAAAAAAATAGCGCAGTCCGAAATGATTGTGGC
AAAAACTCTAGCCATGATTGTGCTTAAGAGGAAATGTCTGTAAGGATCAA
ACAATGGTGGCAGGGTTTTAAAAAATCGATTTGGCTGATGTTTTGCACAG
TGATAGTTCTTGGTCCCAAACCCCTCAAAATAGCTTTTTTTAGATCAAAA
TTCAAAATGCCATGGTAACGGGCAAATCAAGTTTTCTGGCCATTTTCCCT
AATTTTTGCATCTTAAAAAAACGTAGTGGCATTATCCGTCTTCCCAGAAG
GGTGGTCTCGAAGGAGATGCCCGCACCCTTTGTAGGTGCATTTACTCTTT
TTCGGTAACATCGTCTTGTAGCTGCAGAATGGATTGCTGAGCGTGGCTGC
GTGCGTGCTTCTCAGCGCAGAGTGTGTTACTGTCACCCGACGTCTGCTCT
ATATATAAGACATGGAGACAATTCCTTGTCACTGACTAATCCTAACAATC
TACTGAGTCAGGGCAAATTGAGGATATTCCCCGCTGAGACGTCCGGTGTC
CATCTGACCAGGGTGCGCTATCACCCACGTCTTGGTTTCTCAGAAGCCGA
GGTCAGGAGTTCAAACTTAAATGAACCATATCCATTTTCACCTTAAAAGC
ACAAGTAGTGGCCTTATAACTGCAACAAATTTCAACGTATCGTCAAAACA
AAACATGATCCTTTTAAAATGATAGACTGCTAACTACCATGATGTTACGC
TTTGCCAACAGAGTCAATCCATGGGTGAATTCAGCTATGACACTATGTAC
ACGAAATGTACATGTCCAGAGTAAGAATCTATCAGCATCAGTTCAACAAG
CAACAAAGGCCGG Coding sequence (CDS) from alignment at Sc0000291:22137..25899- >transcript:BL70615_cuf0 ID=transcript:BL70615_cuf0|Name=transcript:BL70615_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1815bp|location=Sequence derived from alignment at Sc0000291:22137..25899- (Branchiostoma lanceolatum)
AAGGCACTGTACAAGGCCAAAATGGGTAAATTTGCAGCTGAAATGGACAA
GGAAAAAGAGCAGTGGATGAAAACGTACATGAAAGTGACAGAAGACGGCA
CCTATTGGAAGTATGGTAATGTACCACGGGGAGATAGAACCATGATCTTT
GACAAGGAAGAACAAACTTGCAAGCTCAGCAGAAGTGCAGATGATTTCTT
AAAGAGCACCTTTGAAATGACGGGTGACGGAGCAATGACTTTACAGACTC
GTGGAGGTTTCATTATGCTCATCAAGGTGACTGGCAACAAGATGAAAATC
AGTCAATCCATGGGTGAATTCAGCTATGACACTATGTACACGAAATGTAC
ATGTCCAGAGTAAAAGGCACTGTACAAGGCCAAAATGGGTAAATTTGCAG
CTGAAATGGACAAGGAAAAAGAGCAGTGGATGAAAACGTACATGAAAGTG
ACAGAAGACGGCACCTATTGGAAGTATGGTAATGTACCACGGGGAGATAG
AACCATGATCTTTGACAAGGAAGAACAAACTTGCAAGCTCAGCAGAAGTG
CAGATGATTTCTTAAAGAGCACCTTTGAAATGACGGGTGACGGAGCAATG
ACTTTACAGACTCGTGGAGGTTTCATTATGCTCATCAAGGTGACTGGCAA
CAAGATGAAAATCAGTCAATCCATGGGTGAATTCAGCTATGACACTATGT
ACACGAAATGTACATGTCCAGAGTAAAAGGCACTGTACAAGGCCAAAATG
GGTAAATTTGCAGCTGAAATGGACAAGGAAAAAGAGCAGTGGATGAAAAC
GTACATGAAAGTGACAGAAGACGGCACCTATTGGAAGTATGGTAATGTAC
CACGGGGAGATAGAACCATGATCTTTGACAAGGAAGAACAAACTTGCAAG
CTCAGCAGAAGTGCAGATGATTTCTTAAAGAGCACCTTTGAAATGACGGG
TGACGGAGCAATGACTTTACAGACTCGTGGAGGTTTCATTATGCTCATCA
AGGTGACTGGCAACAAGATGAAAATCAGTCAATCCATGGGTGAATTCAGC
TATGACACTATGTACACGAAATGTACATGTCCAGAGTAAAAGGCACTGTA
CAAGGCCAAAATGGGTAAATTTGCAGCTGAAATGGACAAGGAAAAAGAGC
AGTGGATGAAAACGTACATGAAAGTGACAGAAGACGGCACCTATTGGAAG
TATGGTAATGTACCACGGGGAGATAGAACCATGATCTTTGACAAGGAAGA
ACAAACTTGCAAGCTCAGCAGAAGTGCAGATGATTTCTTAAAGAGCACCT
TTGAAATGACGGGTGACGGAGCAATGACTTTACAGACTCGTGGAGGTTTC
ATTATGCTCATCAAGGTGACTGGCAACAAGATGAAAATCAGTCAATCCAT
GGGTGAATTCAGCTATGACACTATGTACACGAAATGTACATGTCCAGAGT
AAAAGGCACTGTACAAGGCCAAAATGGGTAAATTTGCAGCTGAAATGGAC
AAGGAAAAAGAGCAGTGGATGAAAACGTACATGAAAGTGACAGAAGACGG
CACCTATTGGAAGTATGGTAATGTACCACGGGGAGATAGAACCATGATCT
TTGACAAGGAAGAACAAACTTGCAAGCTCAGCAGAAGTGCAGATGATTTC
TTAAAGAGCACCTTTGAAATGACGGGTGACGGAGCAATGACTTTACAGAC
TCGTGGAGGTTTCATTATGCTCATCAAGGTGACTGGCAACAAGATGAAAA
TCAGTCAATCCATGGGTGAATTCAGCTATGACACTATGTACACGAAATGT
ACATGTCCAGAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000291 | genome | Sc0000291:22137..25899 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL70615_cuf0 |
| Biotype | protein_coding |
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