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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041584 ID=TCONS_00041584|Name=TCONS_00041584|organism=Clytia hemisphaerica|type=transcript|length=1721bp
ATTTCAACAACATTACGCACGAGAAAAAGTCGCATCCGTCAACCGTTTAC
GCTTCCGTTATTTATTCGCTTGACGTCTCTACGTCTTGAATCGTCTGGCt
acaattttacaaatttaCGTACGCTTTTTCGACACCGTTACTCTCGATTA
CGTCAACCATATCATAACGCTCATTAACGTCAAaccttttaaagtttttt
ttaacattaaGAATTTTTAAACGATAATCCTTaattaagaaataattttt
cttttcatgctgatttcTGGGAAATCGATGGATTAGTCTGGAGGTCACAG
ACCTctctaaatttatttttatatcgTAGTTTTTGAAATAAGGATTATTA
AAAGACAACTCTGTGGATGAGGTAACAGGATCATTTGCCAAACCACttaa
gatacacgttttttttataagaatggtgttttttcatttcatcttaactt
ttttgggaaaatcatcctaaaatattcttacaacattcttaggttgggat
cctaattcatactagatttaacatttactACACATGTCTTAAGCATAAAA
TTGTAAAAGAAGTGAGCCGTACTTGGGGATAATtcataatttataattga
aaatggtcttagaatggcattcttagctttagtagccaaattccatgatg
gtgatatttttagcattttcttagttttttggccattttcatcatgaaca
ttcttataaagtgtattcttattaaaaaaaagcgtgtaattggggataat
tttagaaaatgaaatactttTTCTCGTTATTCTGCAACAGAAAATGGTGG
TATGCTCATTGAATTTGGTACAATTGGTCCTTTTACCTGAACATctcgtt
atttttttaatttgacgaCAATTTGGGTTCCACAGAAAAATTGTTCATAA
ATCTTATCCcaagttggggggggggggctatcgATTCCTAAACAACGGAA
TGTGCCGCCAAAgaaatagctttcaaattgaACCTTTATAATGAATTTTA
GTggacgtttctgacccttacagtgcagtttgatttcatatcctGAAGTT
ATCTGAAATGAGCCTCAGATGTCGACACATGTGCAAAGCAAATCTATATG
GGTAcaagtcaaaactataaagatacatcagatttCTACTGTCAGACTTC
CAATTCAACAGTCCGCAAAcaacacccttacagtgcatttccaGGATCTC
GAAAATCCTACCCTTAAGTGCAGCACATGCCGTAAGACCGATCATCTGAG
TACCCAGAATGTTACCCCTATTTTTATAATATTgtgataaaattcaaaat
aaaattcataatcgtaaaaatagcttcaaaagtATACATAGGTTTATTCA
TAGTTCGGTAGATTATTAGTTTTGAATCGCTTTTATACGTAGTGTTAATT
TTTATCAATGGAAAACTTGAATGGCTGATTTGCTCACCAAATGTATGTAC
CAAatgtaggctacgtcatatcttccttcgtttcgagcttaaaactccta
ctcttcgggaaaCGTGCACTGctcttattttgaaaattgatgcaTGCGTC
CTGAGGTTTTCATAAAACGAGTTATTCCAAACCTAAGCCTATTTGTGCTT
TAATCATTCTTTTCTGATACCCCCTTCTTATAGACCCGATATTTAATAAT
ATCATCAAGATAAGACAAGCATCATATTAGGACGAATCCCAAAATGATAC
AAGTCATCCGGATGATAGCCG Run BLAST on NCBI transcript from alignment at sc0002922:10173..11893 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041584 ID=TCONS_00041584|Name=TCONS_00041584|organism=Clytia hemisphaerica|type=transcript|length=1721bp|location=Sequence derived from alignment at sc0002922:10173..11893 (Clytia hemisphaerica)
CGGCTATCATCCGGATGACTTGTATCATTTTGGGATTCGTCCTAATATGA
TGCTTGTCTTATCTTGATGATATTATTAAATATCGGGTCTATAAGAAGGG
GGTATCAGAAAAGAATGATTAAAGCACAAATAGGCTTAGGTTTGGAATAA
CTCGTTTTATGAAAACCTCAGGACGCAtgcatcaattttcaaaataagag
CAGTGCACGtttcccgaagagtaggagttttaagctcgaaacgaaggaag
atatgacgtagcctacatTTGGTACATACATTTGGTGAGCAAATCAGCCA
TTCAAGTTTTCCATTGATAAAAATTAACACTACGTATAAAAGCGATTCAA
AACTAATAATCTACCGAACTATGAATAAACCTATGTATacttttgaagct
atttttacgattatgaattttattttgaattttatcacAATATTATAAAA
ATAGGGGTAACATTCTGGGTACTCAGATGATCGGTCTTACGGCATGTGCT
GCACTTAAGGGTAGGATTTTCGAGATCCtggaaatgcactgtaagggtgt
tgTTTGCGGACTGTTGAATTGGAAGTCTGACAGTAGaaatctgatgtatc
tttatagttttgacttgTACCCATATAGATTTGCTTTGCACATGTGTCGA
CATCTGAGGCTCATTTCAGATAACTTCaggatatgaaatcaaactgcact
gtaagggtcagaaacgtccACTAAAATTCATTATAAAGGTtcaatttgaa
agctatttcTTTGGCGGCACATTCCGTTGTTTAGGAATcgatagcccccc
ccccccaacttgGGATAAGATTTATGAACAATTTTTCTGTGGAACCCAAA
TTGtcgtcaaattaaaaaaataacgagATGTTCAGGTAAAAGGACCAATT
GTACCAAATTCAATGAGCATACCACCATTTTCTGTTGCAGAATAACGAGA
Aaaagtatttcattttctaaaattatccccaattacacgcttttttttaa
taagaatacactttataagaatgttcatgatgaaaatggccaaaaaacta
agaaaatgctaaaaatatcaccatcatggaatttggctactaaagctaag
aatgccattctaagaccattttcaattataaattatgaATTATCCCCAAG
TACGGCTCACTTCTTTTACAATTTTATGCTTAAGACATGTGTagtaaatg
ttaaatctagtatgaattaggatcccaacctaagaatgttgtaagaatat
tttaggatgattttcccaaaaaagttaagatgaaatgaaaaaacaccatt
cttataaaaaaaacgtgtatcttaaGTGGTTTGGCAAATGATCCTGTTAC
CTCATCCACAGAGTTGTCTTTTAATAATCCTTATTTCAAAAACTAcgata
taaaaataaatttagagAGGTCTGTGACCTCCAGACTAATCCATCGATTT
CCCAgaaatcagcatgaaaagaaaaattatttcttaattAAGGATTATCG
TTTAAAAATTCttaatgttaaaaaaaactttaaaaggtTTGACGTTAATG
AGCGTTATGATATGGTTGACGTAATCGAGAGTAACGGTGTCGAAAAAGCG
TACGtaaatttgtaaaattgtaGCCAGACGATTCAAGACGTAGAGACGTC
AAGCGAATAAATAACGGAAGCGTAAACGGTTGACGGATGCGACTTTTTCT
CGTGCGTAATGTTGTTGAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041584-exon-sc0002922-1491911889:10173..11893 | TCONS_00041584-exon-sc0002922-1491911889:10173..11893 | Clytia hemisphaerica | exon |
| TCONS_00041584-exon-sc0002922-1510915933:10173..11893 | TCONS_00041584-exon-sc0002922-1510915933:10173..11893 | Clytia hemisphaerica | exon |
| TCONS_00041584-exon-sc0002922-1575043694:10173..11893 | TCONS_00041584-exon-sc0002922-1575043694:10173..11893 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002922 | supercontig | sc0002922:10173..11893 . |
Blast
The following BLAST results are available for this feature:
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