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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96275_cuf1 >transcript:BL96275_cuf1-protein ID=transcript:BL96275_cuf1-protein|Name=transcript:BL96275_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=149bp
DQVDGYICLCTDEYTGTNCESMFSPCESTPCHNGGTCTDDYPDYECTCPV
GYGGSTCSINLPECVSGPCNNGGTCVDGIGNFSCSCPSGFEGDICETQIN
ECERSGCENGGTCTDTYGGFDCDCPLGYNGTRCEVNIDDCATHGCTNGS Run BLAST on NCBI mRNA from alignment at Sc0000232:287224..289525+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96275_cuf1 ID=transcript:BL96275_cuf1|Name=transcript:BL96275_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2302bp|location=Sequence derived from alignment at Sc0000232:287224..289525+ (Branchiostoma lanceolatum)
GACCAAGTCGATGGCTACATCTGCCTTTGCACCGATGAGTACACAGGTAA
AACGATCAGCACATTATAAAAAGTTAATAAACACTGTGAATCGCTGATAA
ACATTACGAACTGGCTCAATTCAGAAGCGTATAATGCAAATGAGCGGTCT
GGACGTAGACAGGCGGAGTTTTATTGACTCTCGGCTAGGTGTCAATTACT
ATGCATATCCCCATAGGCACACACAGCCAGCCCTGAGCTAGACCTCCAAT
TATATTATTCAGACTATTTAAGTCTTTCCCTAACAGGGCTCACTAAAGCC
AGTACTGAGCTAACGTTAATCCTACCGTTATGTTTAAAACACACGTCCGC
TAATTGTGGTATTCAGTCTCCCTATAAGTTGAGTTTCCCCAACAGGGCTC
ACTGAATCCAATCCTGAGCTAGACCTAACGTTATGCTTGAAACACACGTC
CGCTAATTGTGGTATTCAGTCTCCCTATAAGTTGAGTTTCCCCAACAGGG
TTCACTGAATCCAATCCTGAGCTAGACCTACCGTTATGTTTGAAACACAC
GTCCGCTAATAATTTGTCGTATTCAGTCCCCCTATAAGTTAAGTTTCCCC
AACAGGGCTCACTAAAGCCAGTACTGAGCTAACGTTAATCCTACCGTTAT
GTTTAAAACACACGTCCGCTAATAATTTGTCGTATTCAGTCCCCCTATAA
GTTGAGTTTCCCCAACAGGGCTCACTGAATCCAATCCTGAGCTAGACCTA
CCGTTATGTTTGAACCACACGTCCGCTAATTGTGGTATTCAGTCTCCCTG
TAAGTTGAGTTTATCCAACAGGGCTCACTGAATCCAATCCTGAGCTAGAC
CTACCGTTATGTTTGAAACACGCGTCCGCTAATTTGTGATATTCAGTCTC
CCTATAAGGTGAGTTCAGACTATGAAAGTCTTTCCCCAACAGGGCTCACT
GAAGCCGACCCTGAGCTAGTCCTAGCTAGAACTTTGGCAACACAAATGCC
ATGGTTGACGTTGATTCCTGCCATGGGGCTAGAACGATCCGCGTGTGTGG
CCAACGTAACACCGCTTCCAACGCTAAAGTGACCACTCTGAGACAGATGG
TCCGTGATATCTACGTCACAGAAAAGGACGTCACAGGAAAGAAGAGCGCT
GATTGGCCTCACTATTGAAATGAAATTCTGTCACCGAACTGTGAAGGAAG
ACCATTGTTTAGCTTTCTAATGAACGCATGTGAATACAGGAGACCGCTTT
ACTAATCTTCAAGCATCCACTGTTCCCAAATCAGCCAGCTAGAGAAGCTC
CAGTCAGCCAGAGAAGCTCCGGGATTGTAGCGCACTTCGTAATAATTAAT
TCAAGGATACAAAGCATTGTTTGGTCTAGAGTCAAGCTACAACACGGTTA
TTTGCTAGCACCAAGGTGCCAATAGCACTTCGCACAGCGGGGGAGCCGCA
GAATCTGCGGTTTTCCATAATACGCTTCTGAATTGGCTCAGTTCGTAATG
AGTAAATAAAAGAAAAAAATCAACAATCATTTTACTTTTTTGCTGTTTCG
TAGTTGCAATGTGCATTAGCTTTTTTGCCCTAACTACCATATTATGTTTT
ATGTGTACAGTTTACAGTTACATGAACTAAACTATATGTTATGCTTACAG
TGACAGATAAGATATTGCCGAATTCACTTTTATACAGGAACGAATTGCGA
GTCCATGTTTAGCCCATGCGAGTCTACTCCCTGTCACAACGGAGGAACTT
GCACTGATGACTATCCGGACTATGAATGTACCTGCCCGGTTGGCTATGGC
GGTTCTACCTGTAGCATCAACCTACCAGAATGTGTGTCCGGCCCTTGTAA
CAATGGCGGCACATGTGTCGACGGAATAGGCAACTTCTCTTGCAGGTGTG
GATTTTATGACTTCAAACCATGAAAATTGTTGTTAGAAAATATCTAAAAC
TGTCTTGTAAGCGAACAATAGTAGGTGTGATAAGAATTAACCGTGAAAGT
AATGGAACACAATAGATAGATAATAGAAGACCGCTAACCAAGAAGGCCTT
TTTTATAGAAAAAAAAAACACAGCTTCAAATGTTTTCTGACTTCTTTTAT
CTTTCTAGCTGCCCATCTGGGTTCGAAGGTGATATTTGCGAGACCCAGAT
CAACGAGTGTGAGAGGTCTGGCTGTGAGAATGGTGGAACGTGTACGGACA
CATACGGGGGTTTCGACTGCGACTGCCCGCTGGGCTACAACGGGACACGA
TGTGAAGTCAACATCGATGATTGTGCAACTCACGGTTGCACCAACGGTTC
TG Coding sequence (CDS) from alignment at Sc0000232:287224..289525+ >transcript:BL96275_cuf1 ID=transcript:BL96275_cuf1|Name=transcript:BL96275_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1341bp|location=Sequence derived from alignment at Sc0000232:287224..289525+ (Branchiostoma lanceolatum)
GACCAAGTCGATGGCTACATCTGCCTTTGCACCGATGAGTACACAGGAAC
GAATTGCGAGTCCATGTTTAGCCCATGCGAGTCTACTCCCTGTCACAACG
GAGGAACTTGCACTGATGACTATCCGGACTATGAATGTACCTGCCCGGTT
GGCTATGGCGGTTCTACCTGTAGCATCAACCTACCAGAATGTGTGTCCGG
CCCTTGTAACAATGGCGGCACATGTGTCGACGGAATAGGCAACTTCTCTT
GCAGCTGCCCATCTGGGTTCGAAGGTGATATTTGCGAGACCCAGATCAAC
GAGTGTGAGAGGTCTGGCTGTGAGAATGGTGGAACGTGTACGGACACATA
CGGGGGTTTCGACTGCGACTGCCCGCTGGGCTACAACGGGACACGATGTG
AAGTCAACATCGATGATTGTGCAACTCACGGTTGCACCAACGGTTCTGAC
CAAGTCGATGGCTACATCTGCCTTTGCACCGATGAGTACACAGGAACGAA
TTGCGAGTCCATGTTTAGCCCATGCGAGTCTACTCCCTGTCACAACGGAG
GAACTTGCACTGATGACTATCCGGACTATGAATGTACCTGCCCGGTTGGC
TATGGCGGTTCTACCTGTAGCATCAACCTACCAGAATGTGTGTCCGGCCC
TTGTAACAATGGCGGCACATGTGTCGACGGAATAGGCAACTTCTCTTGCA
GCTGCCCATCTGGGTTCGAAGGTGATATTTGCGAGACCCAGATCAACGAG
TGTGAGAGGTCTGGCTGTGAGAATGGTGGAACGTGTACGGACACATACGG
GGGTTTCGACTGCGACTGCCCGCTGGGCTACAACGGGACACGATGTGAAG
TCAACATCGATGATTGTGCAACTCACGGTTGCACCAACGGTTCTGACCAA
GTCGATGGCTACATCTGCCTTTGCACCGATGAGTACACAGGAACGAATTG
CGAGTCCATGTTTAGCCCATGCGAGTCTACTCCCTGTCACAACGGAGGAA
CTTGCACTGATGACTATCCGGACTATGAATGTACCTGCCCGGTTGGCTAT
GGCGGTTCTACCTGTAGCATCAACCTACCAGAATGTGTGTCCGGCCCTTG
TAACAATGGCGGCACATGTGTCGACGGAATAGGCAACTTCTCTTGCAGCT
GCCCATCTGGGTTCGAAGGTGATATTTGCGAGACCCAGATCAACGAGTGT
GAGAGGTCTGGCTGTGAGAATGGTGGAACGTGTACGGACACATACGGGGG
TTTCGACTGCGACTGCCCGCTGGGCTACAACGGGACACGATGTGAAGTCA
ACATCGATGATTGTGCAACTCACGGTTGCACCAACGGTTCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000232 | genome | Sc0000232:287224..289525 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96275_cuf1 |
| Biotype | protein_coding |
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