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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95927_evm1 >transcript:BL95927_evm1-protein ID=transcript:BL95927_evm1-protein|Name=transcript:BL95927_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=166bp
MLVVQDFVLIPCHAAPHEAVQEIDHLFDVYQDAVARWGVDDVMVLGDLNA
DCRYVTSGEWDQIRLWTDPRFTWLIGSDADTTVKTTTDCAYDRFVVAGDD
FVSGISASSVSVFNYKDAFNITQDLPVGTHMSNEAPPRTRDPHFSSLPKD
GAAPTRIPFPGSPGSN Run BLAST on NCBI mRNA from alignment at Sc0000218:155861..158728+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95927_evm1 ID=transcript:BL95927_evm1|Name=transcript:BL95927_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2868bp|location=Sequence derived from alignment at Sc0000218:155861..158728+ (Branchiostoma lanceolatum)
ATGCTTGGTTAGTGCACACTGCCATGGTAATTTCATGGTAATTATGGCCA
AATACCAGTCCCTCAATGTCCTAGCAGCCATGCCTTGGACCAAGGCTTGA
ACCAATTAGTTGGCATCTTTCCAGAATTAGTGCTTTCTACCACGGCCTTT
AGTCATGCTTGACCTATACATTAGCACCCTGCAACAACTGGGGTTCTTTA
CAAGGGAGGACTGTAGTTAGGGGGTAGAGAGTTAATTTGGTGTGACCACC
CCCACTGGCACCAGCCAGGGGAAAGGGTTTCCACTTCCCCTTCAGTCCAA
GAAGACTGGGTGATAAATGATGATTAATGGACAGGGGTGTATGCTGGCAT
TAATGCTCTGTTCCAGAGGGAACAGAGGGAATCCAGCATTAATGCTCAAT
GTGCTCCGCTAAGGAGCGCGTAGTGCGGCATTAATGCTACATTAGACAAC
AGTTTGGCAAGGGACTGCTATAGACTAAGAAATATATGATCCTCACGGAA
TACATACAATCCTTACTAATTTGTCAGGCTGGCGGACTGGCGAAAATGGA
CTCTCAGTCTCCCTCTGCTAGTTGGTCTAAATCACACCGGTATGTCGCCA
AGAAACGGACTGTACATATAGTCTGTACTCTCTGTCCGACCAGTGGAAGA
ATAGCTTGATCTTCAGTAAGCTAAACTGGTTCGAGATCATTTTCACTTTT
TTCACCGAACAAAATAGATAGTGGCATAATTATGACAACGAAACGGCTTG
TGAAGATTCCTTCTCCTTGGGATACAGTATCTCAAAAGTGAGCGAGGGAG
TTCATTAACAAGTTTAGGTTTTATATCTCTCCATTAGGGGTGGGTACCGG
TACATAAAATTCAGGTCCGGTCCAGCTCCAGGTCCAGAGGGTCAGGTCCA
GGTCCGGACCTATACCAGTACCTGATTATATAGTGTAGCAGTACATCGTA
TTTTGGAGAGCGAGACACACGTAAAAGTCTCCAAACGTCATGTCTGGAAC
AATATAATTTCTTAGGTTTGCACTTTGTCTCATAATTATAACTATACTCT
CCTCGCCGGTCTGTTTCCTCATCCTTTAAGTGTTTCTAGATATGATTCAC
AGCTAACGTCTTCGAAAACGACTCGTTAAATCTGCTGTTTTGTATTTTCT
TAGACCAGTTATTTGGCCGCCTGCTGGTAACCTGGTACTATAAATTTTCG
AATCGGTCCATAGGCCGGTCCACTGATTTTTTACGGACCACTTCTTTTGC
AAATTGGACCGGTCCATTAAGAAATACCAGTTTTGTACCGGTACACGGTA
CCGGTACCCACCCCTACTCTCCATCCATCCCTCCCTCTCTCCCAGTCGTA
CAAGACTTCGTCCTCATCCCGTGCCATGCTGCCCCGCACGAGGCTGTCCA
AGAGATCGATCACCTCTTTGACGTCTACCAGGACGCGGTTGCTAGATGGG
GCGTCGATGACGTCATGGTACTTGGCGACCTGAACGCCGACTGTCGCTAC
GTCACTTCCGGCGAGTGGGATCAGATCCGCCTGTGGACGGACCCGAGGTT
CACCTGGCTGATCGGAAGTGACGCAGACACGACTGTTAAAACAACCACGG
ACTGCGCTTACGACAGGTTAGTACATCACGCGTTTCGCCTTTCCTTCTCA
TGTATTCTTAGATGCTTTGATAACTTACTAACCAGTCTAACTGTCCGGAC
CTTTTAGCCTTGTGGTAAGTACGTTGGGTGCGTGAGCTGGCGACCCGGGT
TCGATTCCCGGGAGCCAGAAGACTGTACTACTCGCCACGTGCGTTTCATT
ATGATCATATGGTATACCATAACTCTATAGAATGCTGGAACTACCTAAAA
ACTGCAATGCACAAATGGACAAGTATTGACATGACATAACGTATTCAGTT
ATGAATCTGCATGTTATTTCATTGTATTAATTGCTTATTAAGTAGAATTT
TAAGATTTATATTGTATCTATATTTTGTAGTTTGTATTTAACCTTTCGAA
AGTCGCTCATTTTGATGCGCCAATACGTCTTTGTATTTCTCTTATCGTTT
GAATTATAGCTGAATTAGTAGTTAGATATTGAACTACAGGGGGTGTCCCT
TTGGTGTAGTGGTCTGCGCTTCTGTCTCTCACCACATCTGCTTCAAATTA
CTTGGACCAGAAGGACTGGAGTTCAAGCCCCAGGTAGGACACCTCTGGAC
AAGAGGCGTATTGAGTCATACCAAAGACTTTATAAAAATGGTACATACTT
CTGAAACAGTATGGAAGTTAACTGAAGTTAAACACACTTCACTGCCAGTG
ACTAGCCCCCCTGCTACAGTGATTGCACCACAGTGTGGCCCAGGGCTATG
AAACGGAGATGGGCACCGCCCTATACATCAATAATGGGAGGATTTTAACT
AATTGAACTACGCTTGTTTGTCCTATTCTCAGGTTTGTCGTTGCTGGAGA
CGATTTCGTGAGCGGAATCAGCGCAAGTTCAGTTTCTGTCTTCAACTACA
AGGACGCCTTTAACATCACTCAAGATCTGGTAAGATCACTTAACATGCCG
ATACTAGTATATCATATGTATATCTAATCTCCAAGCAGATGTAGAAGGGC
AAAATCGTAACGTTACTCTTCTTGTTTCTAGAAAGGTCCACTGCACCATA
CAACCGGGAGCTTGATAAACATTGCGATTTTGCCTAGCTTTTTGCATCTG
CTTGGAGATTAGTATATAATTCACCAGGTTGTATTATTACAGCCAGTAGG
TACCCATATGAGTAATGAGGCACCTCCTCGAACACGGGACCCCCATTTTT
CGTCTCTTCCGAAAGACGGTGCAGCTCCGACAAGGATACCCTTCCCGGGG
TCTCCCGGATCCAACTGA Coding sequence (CDS) from alignment at Sc0000218:155861..158728+ >transcript:BL95927_evm1 ID=transcript:BL95927_evm1|Name=transcript:BL95927_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2004bp|location=Sequence derived from alignment at Sc0000218:155861..158728+ (Branchiostoma lanceolatum)
ATGCTTGTCGTACAAGACTTCGTCCTCATCCCGTGCCATGCTGCCCCGCA
CGAGGCTGTCCAAGAGATCGATCACCTCTTTGACGTCTACCAGGACGCGG
TTGCTAGATGGGGCGTCGATGACGTCATGGTACTTGGCGACCTGAACGCC
GACTGTCGCTACGTCACTTCCGGCGAGTGGGATCAGATCCGCCTGTGGAC
GGACCCGAGGTTCACCTGGCTGATCGGAAGTGACGCAGACACGACTGTTA
AAACAACCACGGACTGCGCTTACGACAGGTTTGTCGTTGCTGGAGACGAT
TTCGTGAGCGGAATCAGCGCAAGTTCAGTTTCTGTCTTCAACTACAAGGA
CGCCTTTAACATCACTCAAGATCTGCCAGTAGGTACCCATATGAGTAATG
AGGCACCTCCTCGAACACGGGACCCCCATTTTTCGTCTCTTCCGAAAGAC
GGTGCAGCTCCGACAAGGATACCCTTCCCGGGGTCTCCCGGATCCAACTG
AATGCTTGTCGTACAAGACTTCGTCCTCATCCCGTGCCATGCTGCCCCGC
ACGAGGCTGTCCAAGAGATCGATCACCTCTTTGACGTCTACCAGGACGCG
GTTGCTAGATGGGGCGTCGATGACGTCATGGTACTTGGCGACCTGAACGC
CGACTGTCGCTACGTCACTTCCGGCGAGTGGGATCAGATCCGCCTGTGGA
CGGACCCGAGGTTCACCTGGCTGATCGGAAGTGACGCAGACACGACTGTT
AAAACAACCACGGACTGCGCTTACGACAGGTTTGTCGTTGCTGGAGACGA
TTTCGTGAGCGGAATCAGCGCAAGTTCAGTTTCTGTCTTCAACTACAAGG
ACGCCTTTAACATCACTCAAGATCTGCCAGTAGGTACCCATATGAGTAAT
GAGGCACCTCCTCGAACACGGGACCCCCATTTTTCGTCTCTTCCGAAAGA
CGGTGCAGCTCCGACAAGGATACCCTTCCCGGGGTCTCCCGGATCCAACT
GAATGCTTGTCGTACAAGACTTCGTCCTCATCCCGTGCCATGCTGCCCCG
CACGAGGCTGTCCAAGAGATCGATCACCTCTTTGACGTCTACCAGGACGC
GGTTGCTAGATGGGGCGTCGATGACGTCATGGTACTTGGCGACCTGAACG
CCGACTGTCGCTACGTCACTTCCGGCGAGTGGGATCAGATCCGCCTGTGG
ACGGACCCGAGGTTCACCTGGCTGATCGGAAGTGACGCAGACACGACTGT
TAAAACAACCACGGACTGCGCTTACGACAGGTTTGTCGTTGCTGGAGACG
ATTTCGTGAGCGGAATCAGCGCAAGTTCAGTTTCTGTCTTCAACTACAAG
GACGCCTTTAACATCACTCAAGATCTGCCAGTAGGTACCCATATGAGTAA
TGAGGCACCTCCTCGAACACGGGACCCCCATTTTTCGTCTCTTCCGAAAG
ACGGTGCAGCTCCGACAAGGATACCCTTCCCGGGGTCTCCCGGATCCAAC
TGAATGCTTGTCGTACAAGACTTCGTCCTCATCCCGTGCCATGCTGCCCC
GCACGAGGCTGTCCAAGAGATCGATCACCTCTTTGACGTCTACCAGGACG
CGGTTGCTAGATGGGGCGTCGATGACGTCATGGTACTTGGCGACCTGAAC
GCCGACTGTCGCTACGTCACTTCCGGCGAGTGGGATCAGATCCGCCTGTG
GACGGACCCGAGGTTCACCTGGCTGATCGGAAGTGACGCAGACACGACTG
TTAAAACAACCACGGACTGCGCTTACGACAGGTTTGTCGTTGCTGGAGAC
GATTTCGTGAGCGGAATCAGCGCAAGTTCAGTTTCTGTCTTCAACTACAA
GGACGCCTTTAACATCACTCAAGATCTGCCAGTAGGTACCCATATGAGTA
ATGAGGCACCTCCTCGAACACGGGACCCCCATTTTTCGTCTCTTCCGAAA
GACGGTGCAGCTCCGACAAGGATACCCTTCCCGGGGTCTCCCGGATCCAA
CTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000218 | genome | Sc0000218:155861..158728 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95927_evm1 |
| Biotype | protein_coding |
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