transcript:BL75092_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL75092_cuf0
Unique Nametranscript:BL75092_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL75092_cuf0

>transcript:BL75092_cuf0-protein ID=transcript:BL75092_cuf0-protein|Name=transcript:BL75092_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=165bp
QKEWGGSMIFAHGTSNQRGTAILFKNSVAPNIYETKCDINGRWIIVDLSI
DDYRFCLVNIYAPNEDSPEFFSNLCNEIECFDVCNENLIITGDFNTVQNP
QLDRSSIHKTYHPKSYDAILELMGEFDLYDIWRFKNPNTSRYTWRRRKQA
SRIDYFLVSFSLMNR
Run BLAST on NCBI

mRNA from alignment at Sc0000142:66740..67237+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL75092_cuf0 ID=transcript:BL75092_cuf0|Name=transcript:BL75092_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=498bp|location=Sequence derived from alignment at Sc0000142:66740..67237+ (Branchiostoma lanceolatum)
GGCAGAAGGAGTGGGGGGGTTCCATGATTTTTGCACATGGGACCTCCAAT
CAAAGGGGTACAGCCATTCTATTTAAAAATAGTGTTGCTCCTAATATTTA
TGAAACAAAATGTGACATTAATGGCAGGTGGATAATTGTTGATTTGTCAA
TTGATGATTATCGATTTTGTCTTGTGAATATCTATGCGCCTAATGAAGAC
TCTCCTGAATTCTTTTCCAATTTGTGTAATGAAATAGAATGTTTTGATGT
ATGTAATGAGAATTTGATTATAACGGGAGACTTCAATACAGTGCAAAATC
CACAGTTAGATAGGTCGTCAATACATAAAACATACCACCCCAAAAGTTAT
GATGCCATTTTAGAACTAATGGGAGAATTTGACTTGTATGACATATGGAG
ATTCAAGAACCCAAACACAAGTAGATACACATGGAGACGCAGAAAACAAG
CTAGTAGGATAGATTATTTTCTTGTAAGCTTTTCTTTGATGAACAGGG

Coding sequence (CDS) from alignment at Sc0000142:66740..67237+

>transcript:BL75092_cuf0 ID=transcript:BL75092_cuf0|Name=transcript:BL75092_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=495bp|location=Sequence derived from alignment at Sc0000142:66740..67237+ (Branchiostoma lanceolatum)
CAGAAGGAGTGGGGGGGTTCCATGATTTTTGCACATGGGACCTCCAATCA
AAGGGGTACAGCCATTCTATTTAAAAATAGTGTTGCTCCTAATATTTATG
AAACAAAATGTGACATTAATGGCAGGTGGATAATTGTTGATTTGTCAATT
GATGATTATCGATTTTGTCTTGTGAATATCTATGCGCCTAATGAAGACTC
TCCTGAATTCTTTTCCAATTTGTGTAATGAAATAGAATGTTTTGATGTAT
GTAATGAGAATTTGATTATAACGGGAGACTTCAATACAGTGCAAAATCCA
CAGTTAGATAGGTCGTCAATACATAAAACATACCACCCCAAAAGTTATGA
TGCCATTTTAGAACTAATGGGAGAATTTGACTTGTATGACATATGGAGAT
TCAAGAACCCAAACACAAGTAGATACACATGGAGACGCAGAAAACAAGCT
AGTAGGATAGATTATTTTCTTGTAAGCTTTTCTTTGATGAACAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL75092gene:BL75092Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL75092_cuf0-E1BL75092_cuf0-E1-1564476830-342394Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL75092_cuf0transcript:BL75092_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000142genomeSc0000142:66740..67237 +
Properties
Property NameValue
Transcript idBL75092_cuf0
Biotypeprotein_coding