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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95786_evm0 >transcript:BL95786_evm0-protein ID=transcript:BL95786_evm0-protein|Name=transcript:BL95786_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=163bp
MGVHAPCHRPIIVGHMGEVLMGEAGWERCADSDVEDMAFSAVLDTSVTLF
SAPAFKEICSTLAMCEKQSPERMERQSACLANYIVQVCGTKTTKYSRLFY
EAQVEPTYSGQSSVTSGPFDPDFLWRNTHVTSALTLYPVKDAKTTYQLYH
YFHGADYNIRRSS Run BLAST on NCBI mRNA from alignment at Sc0000123:159129..163687+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95786_evm0 ID=transcript:BL95786_evm0|Name=transcript:BL95786_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4559bp|location=Sequence derived from alignment at Sc0000123:159129..163687+ (Branchiostoma lanceolatum)
ATGGGTGTTCACGCCCCCTGCCACCGACCGGTACCGCCCCCACTATCGCA
GAGTCACTTGACTTGTCACACCGAATGTTGCCAGAGTTCACTGCCCTCGT
TTTTAACAAGAAGACGGTCACCATTTTTGCGACATCCCCCAGGAGATACA
AACCTTCATGTAAAGTCAACATGACAAGTGGGCAGTAACCGGAATAATCC
TCTTCCATTTATGAATACAGCTACTCTTCCGTGATAGCTCGGCTTCGCCA
TAGTGCCTCAGCAGTGACAGATTTATCACATTATATAACAGTCATAATGA
AAGATATCTGTCTTCCTTTAGCAAATGCTAAGGACAAAGCGAGCTCAAAA
AAGAATAGCCATAATCAAAGTGCCGTGGACTGCTGCAGTAGCGAAAAAAG
TTAGTAAGACCTATTATAATATTACTGGGATTTTTATTTTAGGTGAAAGT
TTTGTCACTATCGTGCTCTGAAACTAAATGTTAACAATCAATTTTCTCAA
CTAATAAAGAAAAAGAGTTTAATACATTGCTGGGGAATACTTCAGCATCA
CAAATGCGTGTTGGGAAAACTCTGTGATGGAACGCAGGGCACCTGGGTTC
AATTTTTAATGTTTCAATTGCTCCCTGGAGAAAATAATGGTCGTTACGAC
AGCAATAAACTGCGCCTTTTATGCCCACCTCTAATCAGTAAACTAAAGAT
TCACACAACACAGAACAGTATAGCTTTCACGAACGGCATTTTACTTTACA
AAGGAAAGTTATAACATCATTACGGAGTACACGATATTACATGTTTACGA
AGCCTTTCATATGGCTATTCTAATTACCAAGCTACTTTAAAACGTGTCCT
CACATGAACTACCCCTGGTGCTTAAACCGTGATCAAATCGTGAGATTACA
ACTTTAATCAATTCTCTAGTTTTAGATTTGCAGCTGTTATTTGTATAATC
GATATATACTGCTAATTGCATATCGATAAGGACCGAATAAAACAAAGTGC
GAGTATACGATCTGCACACATCTAACTGACACATCACAGTATGCAAAATG
ACGCTTGCAGGTCTTAATATATCGTGGTGTATTAGGACCAAAACAACGAC
ACACTTTTCTGCAGCTGGTCTCGGATAACGTTTTAAGCAAGTGATGGCGT
TGTTCTAACATGATTTTGATACTCCTTTACCTGCAGATCATTGTGGGTCA
CATGGGGGAGGTTCTGATGGGGGAGGCCGGCTGGGAACGTTGTGCGGACA
GTGACGTGGAGGACATGGCGTTTTCCGCCGTCCTGGACACCAGCGTCACG
CTCTTCAGCGCACCCGCCTTCAAAGGTGACAAACACAGATTTCTACATAA
CGCACAAATGTTTTAACGTTTAAAAACAAGACTTGTTCTCAATAGGGCGT
ATTCCTAATCTTAATTCCGGCTGTTTCGTTGACGTTTATAACTAACACTA
ACACCGTAATTGTCCAAAGAACTGATNCACACGTTAAACAAGACTTGTTC
TCAATAGGGCGTATTCCTAATCTTAATTCCGGCTGTTTCGTTGACGTTTA
TAACTAACACTAACATCGTAATTGTCCAAAGAACTGATATGTTTGTAGTT
GTTTCAACAATTTTGATGGGGAGTTCTGCCTACTCTGCCTCGAGATCAGT
CAACGACGGGAGACGCCATCTCATACACAAAGTTGTTGACTAATGTTAGA
TTTGAATTGCAACAACACAATACAACGTGCAGCAACAGGCAGAGAAGTGT
TGTGCACCACAAGCAAGGCAATAGATACCATCTAAAAGCAATACAATACG
GTGAATATTACATATATACCTAACTAAATGGAGACGTGGTTCAGCTGGAA
GGGGCATCGAATCTATATAGCCAAAGTAGTTCGTATATGTGCGATTCCCC
TATAGGGAAAGAAAATATTATTAATTTATTTTGTTTTCTATTTGCATTAC
CGTGACGAGAAGTGCTACATAGTAGATCTATAAAGTTGTCACTACCCACC
CACTAGCCCCAGCTGTCCCCATCCCGGGATAAACAGACGCATTAAGCCAT
AACTATCATAAAGGGAAGTCATTCTTCAGCAGTACGTTTCCTTTTGTGTG
AGTTTATGAAGCGGAAGAGCAGTGTATCGGCGGAAATAGGACGTTAGGGG
CACGTTATCACATACATGACTGGACCCAGAGCCTTGCATGGCCAATGGCC
CTTCCNGCCTTGCACGGGCAATGGCCCTTCCTTTGGAAGAGCTTCAAATC
CATTCATCAGTAAAAGCCTTCTGGGATTGGAGAATATCTTACTGGAATAA
TCTTGAAAATATCTGAACAATCGCTTTATGGGGTAGATATGACGACGACT
AGCCATGCTGGTTTTGCTTCTTTGTTTTCTTTATGTAATTGGCTTCCCTG
TACGCATATAAGGGCTGGTTTATCAGCGAATTGGATTTATGTAAGTGATA
GTAGAGCTATCGTGCACCGGAAGCTAAATTGCTATTTCCAAAGTATTATA
ATCTATTTTATTCTCCCACGTCGTTATGATCTGGATCAGGATAAACGACC
TGTTTCGTGGCTAATATCACTTCCTTAGGGCGTCTCAATTTCCGACGATC
TTATCCCAAAATTGGCGTAATATATCCATATCTTATCGCAAAAATGCACT
CATAATCACATTCTAGGTACCAAATGAAACCTGTTCCTCAACTAGAGGAT
ATTCCAGGCCAAATTAATTTCATAACAAGAAAATATTAGGTTGTTTTGCA
CTTGTCGATATATATTACCAATTTTTCATTGAGTGATGGGTTCGTTAGAA
AACAAGATAGACTGGAAAAGCAATTTTCGTATCAGAAATTGATCTTCAAT
CTCTCAGCCACTCTTAAGTATAATACCGATTCAGGGGCAATCGAGACGTC
GCAAGCAATAAGTGTTGCAATAAGTGTCAGAACAAATGACGAGCGGTGCC
AGTCCTGACAGTATCTGATGACACGGCAGGCGAGACTGCTGTTTATTAAA
ACTGTAACCATGCAGAGACCGTTCTCTGGACAGATATTGATACTCATTAT
GCGTGATCATCGTTAACTTTACGGTATGGACCGTTGGTGTGATGATCCTC
GTGGCGTTTCAAGTTGCCATTAGATGACTCGCGATACTCCAGGGCTCTGT
ACAGCGAAAGACCTTAGTATCAAAACGACACAGCTGGCTGTGGGAAGTTT
GCATGCGACTATCTGCCTTCTTTCTAATCTTCACGTNCGTCACGTATGAT
CACTATGTTGCCTTCATAGGCGTAGGGTTTATCGAAATTATGTGTCATTT
TCCTGTCGTAGACGCCACATATGCATGTATATCACAAGATAGGTCATACC
CAAGTCGCGAAACATTCAGTTCGGGAAGCTGATATCAAGAAATAAAAGGG
ATCGTTTCAATGAAAACTACATTACAGGGCAAGCCGATACTTAACTCTAG
CTGTTTCCCTGTCTATTTGTAGCCCAGAACACGACTGACATGCCAGAAAT
CTGGTCGTTTAAATTGTCTGTTACTTTATCATGTCATGCTTTCATGGCAA
GTGTTACTCACGTGGTAGCTATGTCTTGTTACTGTATGTGCTGGAATTTT
TGAGCTCCCATCAGATTAACATAAAAATCCTCGTTTACACCTACATAAAC
ACATACAATTATCTATTTGCATACTTTGCTTAGGAGATTATGCTTATTAT
TTTGTTTCGCTGTAGAGATCTGCTCAACTCTCGCGATGTGTGAGAAGCAG
TCTCCTGAGAGGATGGAGAGACAAAGTGCGTGTTTGGCCAACTACATCGT
CCAAGTTTGTGGCACAAAGACAACAAAAGTACGTACCAATCTTCGACTTT
CGTATGTAATACTTAAGTTTACAGGTTTTCCCTTGAGATGATCGAGATAA
TCAAGCTCTGGGGAAGGCATAGTCACGTATTTCAGCAAACTGAAGGATTG
TCCAAATGATAACGCTTTATCTGATGCACCGTGCAATCGTGTTTCTTTAT
AGCTGCCTAATAAGTATGTAGTCACTTGATCTCTGAACGTTTTGAGCATA
CACANATGAAGTCACTTGATCTCTCAACGTTTTGAGCATACACAGGGGCA
AACCTACACAGAATTTTATAGCAGAGAAATATGAATACGCAAAGTTTAAA
TGTAATGAAAAAAATTATTATATATTGTCCTCCAACTAAACAAAAAACAC
TGTTGGAGTTGGACAACACGGTTTATTTCTCAATATGTGATTTACTAACT
CAGTACTTTCATGCTAAGTTTCAACGTATGTAAATTGCTTACTCAGTATA
GTGATGTGCTTCTATCAACCAGTTGAATTTGATGTCCTGTCTTATACAGT
ATTCTCGGCTGTTCTACGAGGCACAAGTCGAGCCCACGTACTCTGGCCAG
TCCAGCGTCACCTCTGGACCTTTTGATCCGGACTTCCTCTGGAGAAACAC
CCATGTGACGTCAGCGTTGACGCTATATCCGGTGAAGGATGCCAAGACCA
CTTACCAGCTGTATCACTACTTCCACGGAGCGGATTACAACATCAGGAGA
AGCTCTTGA Coding sequence (CDS) from alignment at Sc0000123:159129..163687+ >transcript:BL95786_evm0 ID=transcript:BL95786_evm0|Name=transcript:BL95786_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1968bp|location=Sequence derived from alignment at Sc0000123:159129..163687+ (Branchiostoma lanceolatum)
ATGGGTGTTCACGCCCCCTGCCACCGACCGATCATTGTGGGTCACATGGG
GGAGGTTCTGATGGGGGAGGCCGGCTGGGAACGTTGTGCGGACAGTGACG
TGGAGGACATGGCGTTTTCCGCCGTCCTGGACACCAGCGTCACGCTCTTC
AGCGCACCCGCCTTCAAAGAGATCTGCTCAACTCTCGCGATGTGTGAGAA
GCAGTCTCCTGAGAGGATGGAGAGACAAAGTGCGTGTTTGGCCAACTACA
TCGTCCAAGTTTGTGGCACAAAGACAACAAAATATTCTCGGCTGTTCTAC
GAGGCACAAGTCGAGCCCACGTACTCTGGCCAGTCCAGCGTCACCTCTGG
ACCTTTTGATCCGGACTTCCTCTGGAGAAACACCCATGTGACGTCAGCGT
TGACGCTATATCCGGTGAAGGATGCCAAGACCACTTACCAGCTGTATCAC
TACTTCCACGGAGCGGATTACAACATCAGGAGAAGCTCTTGAATGGGTGT
TCACGCCCCCTGCCACCGACCGATCATTGTGGGTCACATGGGGGAGGTTC
TGATGGGGGAGGCCGGCTGGGAACGTTGTGCGGACAGTGACGTGGAGGAC
ATGGCGTTTTCCGCCGTCCTGGACACCAGCGTCACGCTCTTCAGCGCACC
CGCCTTCAAAGAGATCTGCTCAACTCTCGCGATGTGTGAGAAGCAGTCTC
CTGAGAGGATGGAGAGACAAAGTGCGTGTTTGGCCAACTACATCGTCCAA
GTTTGTGGCACAAAGACAACAAAATATTCTCGGCTGTTCTACGAGGCACA
AGTCGAGCCCACGTACTCTGGCCAGTCCAGCGTCACCTCTGGACCTTTTG
ATCCGGACTTCCTCTGGAGAAACACCCATGTGACGTCAGCGTTGACGCTA
TATCCGGTGAAGGATGCCAAGACCACTTACCAGCTGTATCACTACTTCCA
CGGAGCGGATTACAACATCAGGAGAAGCTCTTGAATGGGTGTTCACGCCC
CCTGCCACCGACCGATCATTGTGGGTCACATGGGGGAGGTTCTGATGGGG
GAGGCCGGCTGGGAACGTTGTGCGGACAGTGACGTGGAGGACATGGCGTT
TTCCGCCGTCCTGGACACCAGCGTCACGCTCTTCAGCGCACCCGCCTTCA
AAGAGATCTGCTCAACTCTCGCGATGTGTGAGAAGCAGTCTCCTGAGAGG
ATGGAGAGACAAAGTGCGTGTTTGGCCAACTACATCGTCCAAGTTTGTGG
CACAAAGACAACAAAATATTCTCGGCTGTTCTACGAGGCACAAGTCGAGC
CCACGTACTCTGGCCAGTCCAGCGTCACCTCTGGACCTTTTGATCCGGAC
TTCCTCTGGAGAAACACCCATGTGACGTCAGCGTTGACGCTATATCCGGT
GAAGGATGCCAAGACCACTTACCAGCTGTATCACTACTTCCACGGAGCGG
ATTACAACATCAGGAGAAGCTCTTGAATGGGTGTTCACGCCCCCTGCCAC
CGACCGATCATTGTGGGTCACATGGGGGAGGTTCTGATGGGGGAGGCCGG
CTGGGAACGTTGTGCGGACAGTGACGTGGAGGACATGGCGTTTTCCGCCG
TCCTGGACACCAGCGTCACGCTCTTCAGCGCACCCGCCTTCAAAGAGATC
TGCTCAACTCTCGCGATGTGTGAGAAGCAGTCTCCTGAGAGGATGGAGAG
ACAAAGTGCGTGTTTGGCCAACTACATCGTCCAAGTTTGTGGCACAAAGA
CAACAAAATATTCTCGGCTGTTCTACGAGGCACAAGTCGAGCCCACGTAC
TCTGGCCAGTCCAGCGTCACCTCTGGACCTTTTGATCCGGACTTCCTCTG
GAGAAACACCCATGTGACGTCAGCGTTGACGCTATATCCGGTGAAGGATG
CCAAGACCACTTACCAGCTGTATCACTACTTCCACGGAGCGGATTACAAC
ATCAGGAGAAGCTCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000123 | genome | Sc0000123:159129..163687 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95786_evm0 |
| Biotype | protein_coding |
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