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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81681_cuf0 >transcript:BL81681_cuf0-protein ID=transcript:BL81681_cuf0-protein|Name=transcript:BL81681_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=479bp
KILSQLQDCKAPGPDGIENRLLKISSDTIAGPMAYIINLSFTSKTFPTRW
KHAKIIPIAKDNSKPLPGPNSRPVSLLPGCGKICERIASEQIASYILKSN
FQSEAQHAYRKLHSTETALLKMTDDWLDNMDNGFMTAVVLLDYSAAFDLV
DHTLLLKKLTTYGFTGDALSWTESYLTNRKWQVYTNGAYSKQRTLHCGVP
QGSCLGPQLYNIYVNDMPESVQNGSLDQYADDSTVHTRGHTLDVIRTETE
TDLERVATWSDENMLKLNNGKTKTMLVGTSKKTREAPPLELELRGQRLEQ
CPTVKLLGLHLDQNLTWDNHITHIVKKCNSSLAQVGRVKDALPLRQRIAV
VNALIIPHINYCCSVWGNTTQNNIRRLQVIQNRAARLALGCDRDTHVETM
LKTLGWLTVRDRIQQKSLATFRRIMFTKQPRVLYDKLTFQSDIHSYQTRS
TRANTIRLPKPKSNSQKRRFLYRMAQLWN Run BLAST on NCBI mRNA from alignment at Sc0000115:99553..101055+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81681_cuf0 ID=transcript:BL81681_cuf0|Name=transcript:BL81681_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1503bp|location=Sequence derived from alignment at Sc0000115:99553..101055+ (Branchiostoma lanceolatum)
ACAAAATCCTCTCACAACTTCAGGACTGTAAAGCACCAGGTCCAGATGGT
ATCGAAAACAGGTTGCTGAAGATTAGTTCAGATACCATAGCTGGCCCAAT
GGCTTACATCATCAACCTGTNCAGGTTGCTGGAGATTAGTTCAGATACCA
TAGCTGGCCCAATGGCTTACATCATCAACCTGTCATTTACATCAAAAACC
TTCCCCACACGATGGAAACATGCCAAAATCATTCCAATCGCCAAGGATAA
CAGTAAGCCACTGCCAGGGCCAAACTCAAGACCTGTGAGTCTTCTCCCAG
GTTGTGGGAAGATATGTGAGAGAATCGCTTCTGAGCAGATTGCATCCTAC
ATACTCAAGTCAAATTTTCAATCAGAGGCACAACATGCTTACAGAAAACT
ACACTCCACGGAAACAGCCCTACTAAAGATGACAGACGACTGGCTAGACA
ACATGGACAATGGTTTCATGACAGCGGTAGTTTTACTAGACTACAGCGCA
GCATTTGATTTAGTGGACCACACTTTGCTTTTGAAGAAGCTCACGACCTA
CGGGTTCACAGGGGATGCATTATCTTGGACTGAATCGTACCTGACAAACC
GCAAATGGCAAGTATACACAAATGGAGCCTACAGCAAGCAGAGAACCTTA
CACTGTGGTGTGCCACAGGGAAGCTGCTTAGGTCCGCAATTGTACAATAT
TTATGTAAATGACATGCCGGAGTCTGTACAAAATGGGTCACTAGACCAAT
ATGCTGATGACAGCACGGTTCACACACGAGGACACACATTGGACGTCATA
AGAACAGAAACTGAAACAGACTTAGAAAGAGTGGCAACATGGTCAGATGA
AAATATGCTGAAACTGAACAATGGAAAAACGAAGACGATGCTGGTGGGAA
CATCAAAGAAAACCAGAGAAGCGCCACCTTTGGAGCTGGAACTCAGGGGA
CAACGTCTGGAACAGTGTCCCACAGTAAAGTTACTTGGACTGCACCTTGA
TCAAAACCTCACATGGGATAACCATATAACTCACATAGTGAAGAAGTGCA
ACAGCAGCTTAGCACAGGTGGGAAGAGTTAAGGATGCATTACCACTTCGA
CAGAGAATAGCCGTAGTCAACGCCTTGATAATCCCACATATAAACTACTG
TTGCTCAGTATGGGGAAACACAACACAGAACAACATAAGAAGACTACAGG
TGATTCAGAACAGGGCTGCAAGGCTTGCTCTGGGCTGTGATCGTGACACA
CATGTGGAAACCATGCTGAAGACCTTGGGCTGGCTGACCGTTAGGGACAG
AATTCAACAGAAAAGCCTTGCCACATTTAGACGGATAATGTTCACCAAAC
AACCTAGGGTCCTGTATGACAAACTAACATTCCAGTCAGACATCCACAGC
TACCAAACACGCTCAACCAGAGCAAACACAATCAGACTTCCAAAACCAAA
ATCCAACTCTCAGAAAAGGCGCTTCCTGTACAGAATGGCTCAACTATGGA
ACA Coding sequence (CDS) from alignment at Sc0000115:99553..101055+ >transcript:BL81681_cuf0 ID=transcript:BL81681_cuf0|Name=transcript:BL81681_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2874bp|location=Sequence derived from alignment at Sc0000115:99553..101055+ (Branchiostoma lanceolatum)
AAAATCCTCTCACAACTTCAGGACTGTAAAGCACCAGGTCCAGATGGTAT
CGAAAACAGGTTGCTGAAGATTAGTTCAGATACCATAGCTGGCCCAATGG
CTTACATCATCAACCTGTCATTTACATCAAAAACCTTCCCCACACGATGG
AAACATGCCAAAATCATTCCAATCGCCAAGGATAACAGTAAGCCACTGCC
AGGGCCAAACTCAAGACCTGTGAGTCTTCTCCCAGGTTGTGGGAAGATAT
GTGAGAGAATCGCTTCTGAGCAGATTGCATCCTACATACTCAAGTCAAAT
TTTCAATCAGAGGCACAACATGCTTACAGAAAACTACACTCCACGGAAAC
AGCCCTACTAAAGATGACAGACGACTGGCTAGACAACATGGACAATGGTT
TCATGACAGCGGTAGTTTTACTAGACTACAGCGCAGCATTTGATTTAGTG
GACCACACTTTGCTTTTGAAGAAGCTCACGACCTACGGGTTCACAGGGGA
TGCATTATCTTGGACTGAATCGTACCTGACAAACCGCAAATGGCAAGTAT
ACACAAATGGAGCCTACAGCAAGCAGAGAACCTTACACTGTGGTGTGCCA
CAGGGAAGCTGCTTAGGTCCGCAATTGTACAATATTTATGTAAATGACAT
GCCGGAGTCTGTACAAAATGGGTCACTAGACCAATATGCTGATGACAGCA
CGGTTCACACACGAGGACACACATTGGACGTCATAAGAACAGAAACTGAA
ACAGACTTAGAAAGAGTGGCAACATGGTCAGATGAAAATATGCTGAAACT
GAACAATGGAAAAACGAAGACGATGCTGGTGGGAACATCAAAGAAAACCA
GAGAAGCGCCACCTTTGGAGCTGGAACTCAGGGGACAACGTCTGGAACAG
TGTCCCACAGTAAAGTTACTTGGACTGCACCTTGATCAAAACCTCACATG
GGATAACCATATAACTCACATAGTGAAGAAGTGCAACAGCAGCTTAGCAC
AGGTGGGAAGAGTTAAGGATGCATTACCACTTCGACAGAGAATAGCCGTA
GTCAACGCCTTGATAATCCCACATATAAACTACTGTTGCTCAGTATGGGG
AAACACAACACAGAACAACATAAGAAGACTACAGGTGATTCAGAACAGGG
CTGCAAGGCTTGCTCTGGGCTGTGATCGTGACACACATGTGGAAACCATG
CTGAAGACCTTGGGCTGGCTGACCGTTAGGGACAGAATTCAACAGAAAAG
CCTTGCCACATTTAGACGGATAATGTTCACCAAACAACCTAGGGTCCTGT
ATGACAAACTAACATTCCAGTCAGACATCCACAGCTACCAAACACGCTCA
ACCAGAGCAAACACAATCAGACTTCCAAAACCAAAATCCAACTCTCAGAA
AAGGCGCTTCCTGTACAGAATGGCTCAACTATGGAACAAAATCCTCTCAC
AACTTCAGGACTGTAAAGCACCAGGTCCAGATGGTATCGAAAACAGGTTG
CTGAAGATTAGTTCAGATACCATAGCTGGCCCAATGGCTTACATCATCAA
CCTGTCATTTACATCAAAAACCTTCCCCACACGATGGAAACATGCCAAAA
TCATTCCAATCGCCAAGGATAACAGTAAGCCACTGCCAGGGCCAAACTCA
AGACCTGTGAGTCTTCTCCCAGGTTGTGGGAAGATATGTGAGAGAATCGC
TTCTGAGCAGATTGCATCCTACATACTCAAGTCAAATTTTCAATCAGAGG
CACAACATGCTTACAGAAAACTACACTCCACGGAAACAGCCCTACTAAAG
ATGACAGACGACTGGCTAGACAACATGGACAATGGTTTCATGACAGCGGT
AGTTTTACTAGACTACAGCGCAGCATTTGATTTAGTGGACCACACTTTGC
TTTTGAAGAAGCTCACGACCTACGGGTTCACAGGGGATGCATTATCTTGG
ACTGAATCGTACCTGACAAACCGCAAATGGCAAGTATACACAAATGGAGC
CTACAGCAAGCAGAGAACCTTACACTGTGGTGTGCCACAGGGAAGCTGCT
TAGGTCCGCAATTGTACAATATTTATGTAAATGACATGCCGGAGTCTGTA
CAAAATGGGTCACTAGACCAATATGCTGATGACAGCACGGTTCACACACG
AGGACACACATTGGACGTCATAAGAACAGAAACTGAAACAGACTTAGAAA
GAGTGGCAACATGGTCAGATGAAAATATGCTGAAACTGAACAATGGAAAA
ACGAAGACGATGCTGGTGGGAACATCAAAGAAAACCAGAGAAGCGCCACC
TTTGGAGCTGGAACTCAGGGGACAACGTCTGGAACAGTGTCCCACAGTAA
AGTTACTTGGACTGCACCTTGATCAAAACCTCACATGGGATAACCATATA
ACTCACATAGTGAAGAAGTGCAACAGCAGCTTAGCACAGGTGGGAAGAGT
TAAGGATGCATTACCACTTCGACAGAGAATAGCCGTAGTCAACGCCTTGA
TAATCCCACATATAAACTACTGTTGCTCAGTATGGGGAAACACAACACAG
AACAACATAAGAAGACTACAGGTGATTCAGAACAGGGCTGCAAGGCTTGC
TCTGGGCTGTGATCGTGACACACATGTGGAAACCATGCTGAAGACCTTGG
GCTGGCTGACCGTTAGGGACAGAATTCAACAGAAAAGCCTTGCCACATTT
AGACGGATAATGTTCACCAAACAACCTAGGGTCCTGTATGACAAACTAAC
ATTCCAGTCAGACATCCACAGCTACCAAACACGCTCAACCAGAGCAAACA
CAATCAGACTTCCAAAACCAAAATCCAACTCTCAGAAAAGGCGCTTCCTG
TACAGAATGGCTCAACTATGGAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000115 | genome | Sc0000115:99553..101055 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81681_cuf0 |
| Biotype | protein_coding |
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