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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040941 ID=TCONS_00040941|Name=TCONS_00040941|organism=Clytia hemisphaerica|type=transcript|length=1045bp
GTTTAGTGTTAATTGAAGAAGTGCTAGTGATAAATTCAATGTATATAAAT
CTGAATGAAATtagaatgattcattttatcaTATGATGGTGTCAATAACT
GTAACTTTTTCCTATTTACAACAgaataaaaatgatggaaaataaagtgt
tcttataaaataaagagtcggtcggtctaaaaagtgagtcggtcggtcgg
tctaaaaagtgagtcagtcggtcggtctaaaaagtgagtggGTTGGTCGG
TCTTAAAAAGTGAGACGGTTGGTCGGTCTAAAACATGAGTCGGTCAGTCG
GTCTAAAACGTGACTCGGTCGGTCAGTCGGTCTAAAACGTGAGTCGGTTG
GTCAgtctaaaaattgagtcggtcagtcggtctaaaaagtgagtcggtcg
gtcggtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcggtcg
gtcggtctaaaaagtgagtcggtcggtcggtctaaaaagtgagtcagtca
atcggtctaataagtgagtcggtcgatcagtctataaaaaagtgagtcgg
tcgttcggtctaaaaagtgagtcggtcggtgtaaaaagtgagtcggtcgg
tgtaaaaagtgagtcggtcggtctacaaagtgaggcggtcggtcggtcta
caaagtgaggcggtcggtctacaaagtgaggcggtcggtcaatctaaaaa
gtgagtcggtcgctCGGTCGGCCGGTCGGTCGGACGGTCGGTCGTGGAAA
CAAACATAATTTGTGAATGCCGCATACAAAGACTACCAAATTACTTGGAT
GTATTTATACCATGCAGCAAAAATATGCCACTCCCAATTTTCAAGAGGAC
TAAAGTAAATGTTTCCATTGGTCGGTCTTTGGTCTTTGTTTATTTCGTTA
AGATGGTTGGTTGCGATAAGCCCCATGCCATAATTTCTGAAGAACAACAA
CTGTACAATAAATCCATAACAAAATGTTCTCTATTCAAGAAACAGGATAC
AATGACCATTAGACCATTCCCTATCCATGTACAAACGATGGCAGC Run BLAST on NCBI transcript from alignment at sc0002634:5257..6301 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040941 ID=TCONS_00040941|Name=TCONS_00040941|organism=Clytia hemisphaerica|type=transcript|length=1045bp|location=Sequence derived from alignment at sc0002634:5257..6301 (Clytia hemisphaerica)
GCTGCCATCGTTTGTACATGGATAGGGAATGGTCTAATGGTCATTGTATC
CTGTTTCTTGAATAGAGAACATTTTGTTATGGATTTATTGTACAGTTGTT
GTTCTTCAGAAATTATGGCATGGGGCTTATCGCAACCAACCATCTTAACG
AAATAAACAAAGACCAAAGACCGACCAATGGAAACATTTACTTTAGTCCT
CTTGAAAATTGGGAGTGGCATATTTTTGCTGCATGGTATAAATACATCCA
AGTAATTTGGTAGTCTTTGTATGCGGCATTCACAAATTATGTTTGTTTCC
ACGACCGACCGTCCGACCGACCGGCCGACCGagcgaccgactcacttttt
agattgaccgaccgcctcactttgtagaccgaccgcctcactttgtagac
cgaccgaccgcctcactttgtagaccgaccgactcactttttacaccgac
cgactcactttttacaccgaccgactcactttttagaccgaacgaccgac
tcacttttttatagactgatcgaccgactcacttattagaccgattgact
gactcactttttagaccgaccgaccgactcactttttagaccgaccgacc
gactcactttttagaccgaccgaccgactcactttttagaccgaccgacc
gactcactttttagaccgactgaccgactcaatttttagacTGACCAACC
GACTCACGTTTTAGACCGACTGACCGACCGAGTCACGTTTTAGACCGACT
GACCGACTCATGTTTTAGACCGACCAACCGTCTCACTTTTTAAGACCGAC
CAACccactcactttttagaccgaccgactgactcactttttagaccgac
cgaccgactcactttttagaccgaccgactctttattttataagaacact
ttattttccatcatttttattcTGTTGTAAATAGGAAAAAGTTACAGTTA
TTGACACCATCATAtgataaaatgaatcattctaATTTCATTCAGATTTA
TATACATTGAATTTATCACTAGCACTTCTTCAATTAACACTAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040941-exon-sc0002634-1491911889:5257..6301 | TCONS_00040941-exon-sc0002634-1491911889:5257..6301 | Clytia hemisphaerica | exon |
| TCONS_00040941-exon-sc0002634-1510915933:5257..6301 | TCONS_00040941-exon-sc0002634-1510915933:5257..6301 | Clytia hemisphaerica | exon |
| TCONS_00040941-exon-sc0002634-1575043694:5257..6301 | TCONS_00040941-exon-sc0002634-1575043694:5257..6301 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002634 | supercontig | sc0002634:5257..6301 . |
Blast
The following BLAST results are available for this feature:
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