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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95734_evm1 >transcript:BL95734_evm1-protein ID=transcript:BL95734_evm1-protein|Name=transcript:BL95734_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=424bp
MAATDLKAVSIAMPAISSGACGMPRDLCAESMFSAITDFIENVNPKHNTI
VDIRIIDNDRRAAEVFSKVFTKMLATFNFNASKGHATSSNLQPRYPPSGT
SYPGTGTTPVSYGSNQTSSGFQTNSGWGQGHQNISGSSFSSSGVASASPP
IYPGPTQTYIAASSSSYPHGTSVPTYPHLTQNKSNNGVDMSHTYPGANQT
SQPLPPIQQAHSTTSQSMSQLSSPGVASSASSASGNSDKDDECPICLCDF
TGPVTTTPCKHKFCADCLKSALKLSGQCPVCKSVIGRLKGNQPRGTMTDR
IDYLNTLPGYEYCRSIIEIHYNFPDGVQGPEHPNPGKHYTGTSRTAYLPD
TTEGREVLRLLKRAFDSGLVFTIGTSVTTGQTDTVVWNDIHHKTSKYGGP
NSYGYPDPQYLTRVKEELAAKGIK Run BLAST on NCBI mRNA from alignment at Sc0000104:47320..49428- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95734_evm1 ID=transcript:BL95734_evm1|Name=transcript:BL95734_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2109bp|location=Sequence derived from alignment at Sc0000104:47320..49428- (Branchiostoma lanceolatum)
ATGGCTGCCACTGATCTGAAGGCTGTGTCTATTGCTATGCCTGCCATCAG
TTCAGGTAATTATTGAATTGATAAGTAGTCTCATGAAGAAAAATTTTCAT
GAGTTAAAGTTTTTCTTTTAGATCCTTTTCATTGTCTGAAGCAAGCATTA
TATTCAGTGACTTTTCTTCTAAGAAATAAGGAAATTGATATCAGTTAAAA
CTTCAGTATCATAGTTAAGGTATTCATTGCTTAAAATGTGTCATATCCAA
GTAAATTACTTGTAACTAGATCCTGATGTTATTGAATTTTGATATATCTT
AATCACTGTATATGTTCCAGGTGCATGTGGAATGCCCAGAGATCTTTGCG
CTGAGTCCATGTTTAGTGCCATTACAGACTTCATCGAGAATGTCAATCCC
AAACATAACACCATTGTTGACATTCGTATCATCGACAATGACCGAAGAGC
AGCTGAAGTCTTTTCTAAGGTCTTCACCAAGATGCTTGCAACATTCAATT
TCAATGCAAGTAAAGGCCATGCGACAAGTTCAAACTTGCAGCCAAGGTAT
CCGCCTTCTGGCACATCTTATCCTGGCACAGGGACCACCCCAGTATCCTA
CGGAAGCAATCAGACATCTTCTGGTTTCCAGACAAATAGTGGCTGGGGGC
AAGGACATCAGAACATTTCAGGCTCCTCATTCTCCTCATCAGGAGTGGCA
TCAGCATCCCCTCCCATCTACCCAGGTCCAACCCAGACATACATCGCTGC
AAGTTCTTCTTCTTACCCACATGGAACGTCAGTACCAACATACCCTCATC
TTACTCAAAACAAGTCTAATAATGGTGTTGACATGTCACATACTTATCCT
GGGGCCAACCAGACAAGTCAGCCACTTCCACCCATCCAGCAAGCACATTC
TACAACAAGTCAGAGCATGTCACAATTGTCCTCACCAGGAGTAGCATCAT
CAGCTTCCTCTGCATCTGGAAACTCTGACAAAGACGACGAGTGCCCAATC
TGCCTCTGTGACTTCACTGGGCCTGTGACGACAACACCTTGTAAGCACAA
GTTCTGTGCTGACTGCCTAAAGAGTGCCTTGAAGCTTTCTGGACAGTGTC
CCGTCTGCAAATCTGTCATCGGACGACTGAAAGGCAACCAGCCCCGTGGG
ACAATGACAGATCGCATTGACTACCTAAACACCCTTCCTGGGTATGAATA
CTGCCGTTCAATAATCGAAATCCACTACAACTTCCCTGATGGTGTACAAG
GGGTAAGTGTTCAACATGTTCTATTTTGACTCATACATAATCACATTTTC
TAGTCTTGGATATGGGTACAAAATCAAGACCAGAACAGAGTCATTTTATT
CAGTCCTTTAATGATAAAAGCTGTTGATACTAGCTACATTAATTTGTTTG
ATATCAGTTTTTACCTGTGGGTTATAATTCTTTCCTTCTCTTTTGCAGTT
AACTAACAACAACCTGTGAATAGACTGATAGGTGAATTCATGTCTTGATA
ATGTCATTTCAGCCAGAGCATCCAAACCCAGGGAAACACTACACTGGAAC
ATCACGCACAGCCTATCTGCCGGACACCACAGAGGGCCGCGAGGTGCTCC
GTCTCCTGAAACGGGCCTTTGACAGCGGTCTTGTGTTCACCATCGGCACA
TCAGTGACTACAGGACAGACTGATACTGTGGTCTGGAATGACATCCACCA
CAAAACCAGCAAGTATGGCGGTCCTAACAGGTATGTCGCTACGTTGTTGG
CTTCTGCAACTCTTGATTCTTTGATTCTTTAACTGTTTAAAAGTTGTAAG
GGGTCAATTTGCTCAGATAGCCTTTTGGTGCCAAAAGCATGGATTACAAG
CCAGGATAGTTAAAGTCTGTACCAAATTTTATGTGTCAGCACTTACATTT
ATCCTATACTAGTCATGCTGCTGGTGTAATACATGAGTAAATTTTTGGGT
CTTGATATTAGATAATCTTTTCACATTAGATACAGAGTAATGTAACTAAA
TAATCTGTAGTATCATAATTGTCTTCACTTGTTTTGCAGCTATGGCTACC
CTGATCCCCAGTATTTGACAAGAGTGAAGGAGGAACTGGCTGCAAAGGGC
ATCAAGTAG Coding sequence (CDS) from alignment at Sc0000104:47320..49428- >transcript:BL95734_evm1 ID=transcript:BL95734_evm1|Name=transcript:BL95734_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5100bp|location=Sequence derived from alignment at Sc0000104:47320..49428- (Branchiostoma lanceolatum)
ATGGCTGCCACTGATCTGAAGGCTGTGTCTATTGCTATGCCTGCCATCAG
TTCAGGTGCATGTGGAATGCCCAGAGATCTTTGCGCTGAGTCCATGTTTA
GTGCCATTACAGACTTCATCGAGAATGTCAATCCCAAACATAACACCATT
GTTGACATTCGTATCATCGACAATGACCGAAGAGCAGCTGAAGTCTTTTC
TAAGGTCTTCACCAAGATGCTTGCAACATTCAATTTCAATGCAAGTAAAG
GCCATGCGACAAGTTCAAACTTGCAGCCAAGGTATCCGCCTTCTGGCACA
TCTTATCCTGGCACAGGGACCACCCCAGTATCCTACGGAAGCAATCAGAC
ATCTTCTGGTTTCCAGACAAATAGTGGCTGGGGGCAAGGACATCAGAACA
TTTCAGGCTCCTCATTCTCCTCATCAGGAGTGGCATCAGCATCCCCTCCC
ATCTACCCAGGTCCAACCCAGACATACATCGCTGCAAGTTCTTCTTCTTA
CCCACATGGAACGTCAGTACCAACATACCCTCATCTTACTCAAAACAAGT
CTAATAATGGTGTTGACATGTCACATACTTATCCTGGGGCCAACCAGACA
AGTCAGCCACTTCCACCCATCCAGCAAGCACATTCTACAACAAGTCAGAG
CATGTCACAATTGTCCTCACCAGGAGTAGCATCATCAGCTTCCTCTGCAT
CTGGAAACTCTGACAAAGACGACGAGTGCCCAATCTGCCTCTGTGACTTC
ACTGGGCCTGTGACGACAACACCTTGTAAGCACAAGTTCTGTGCTGACTG
CCTAAAGAGTGCCTTGAAGCTTTCTGGACAGTGTCCCGTCTGCAAATCTG
TCATCGGACGACTGAAAGGCAACCAGCCCCGTGGGACAATGACAGATCGC
ATTGACTACCTAAACACCCTTCCTGGGTATGAATACTGCCGTTCAATAAT
CGAAATCCACTACAACTTCCCTGATGGTGTACAAGGGCCAGAGCATCCAA
ACCCAGGGAAACACTACACTGGAACATCACGCACAGCCTATCTGCCGGAC
ACCACAGAGGGCCGCGAGGTGCTCCGTCTCCTGAAACGGGCCTTTGACAG
CGGTCTTGTGTTCACCATCGGCACATCAGTGACTACAGGACAGACTGATA
CTGTGGTCTGGAATGACATCCACCACAAAACCAGCAAGTATGGCGGTCCT
AACAGCTATGGCTACCCTGATCCCCAGTATTTGACAAGAGTGAAGGAGGA
ACTGGCTGCAAAGGGCATCAAGTAGATGGCTGCCACTGATCTGAAGGCTG
TGTCTATTGCTATGCCTGCCATCAGTTCAGGTGCATGTGGAATGCCCAGA
GATCTTTGCGCTGAGTCCATGTTTAGTGCCATTACAGACTTCATCGAGAA
TGTCAATCCCAAACATAACACCATTGTTGACATTCGTATCATCGACAATG
ACCGAAGAGCAGCTGAAGTCTTTTCTAAGGTCTTCACCAAGATGCTTGCA
ACATTCAATTTCAATGCAAGTAAAGGCCATGCGACAAGTTCAAACTTGCA
GCCAAGGTATCCGCCTTCTGGCACATCTTATCCTGGCACAGGGACCACCC
CAGTATCCTACGGAAGCAATCAGACATCTTCTGGTTTCCAGACAAATAGT
GGCTGGGGGCAAGGACATCAGAACATTTCAGGCTCCTCATTCTCCTCATC
AGGAGTGGCATCAGCATCCCCTCCCATCTACCCAGGTCCAACCCAGACAT
ACATCGCTGCAAGTTCTTCTTCTTACCCACATGGAACGTCAGTACCAACA
TACCCTCATCTTACTCAAAACAAGTCTAATAATGGTGTTGACATGTCACA
TACTTATCCTGGGGCCAACCAGACAAGTCAGCCACTTCCACCCATCCAGC
AAGCACATTCTACAACAAGTCAGAGCATGTCACAATTGTCCTCACCAGGA
GTAGCATCATCAGCTTCCTCTGCATCTGGAAACTCTGACAAAGACGACGA
GTGCCCAATCTGCCTCTGTGACTTCACTGGGCCTGTGACGACAACACCTT
GTAAGCACAAGTTCTGTGCTGACTGCCTAAAGAGTGCCTTGAAGCTTTCT
GGACAGTGTCCCGTCTGCAAATCTGTCATCGGACGACTGAAAGGCAACCA
GCCCCGTGGGACAATGACAGATCGCATTGACTACCTAAACACCCTTCCTG
GGTATGAATACTGCCGTTCAATAATCGAAATCCACTACAACTTCCCTGAT
GGTGTACAAGGGCCAGAGCATCCAAACCCAGGGAAACACTACACTGGAAC
ATCACGCACAGCCTATCTGCCGGACACCACAGAGGGCCGCGAGGTGCTCC
GTCTCCTGAAACGGGCCTTTGACAGCGGTCTTGTGTTCACCATCGGCACA
TCAGTGACTACAGGACAGACTGATACTGTGGTCTGGAATGACATCCACCA
CAAAACCAGCAAGTATGGCGGTCCTAACAGCTATGGCTACCCTGATCCCC
AGTATTTGACAAGAGTGAAGGAGGAACTGGCTGCAAAGGGCATCAAGTAG
ATGGCTGCCACTGATCTGAAGGCTGTGTCTATTGCTATGCCTGCCATCAG
TTCAGGTGCATGTGGAATGCCCAGAGATCTTTGCGCTGAGTCCATGTTTA
GTGCCATTACAGACTTCATCGAGAATGTCAATCCCAAACATAACACCATT
GTTGACATTCGTATCATCGACAATGACCGAAGAGCAGCTGAAGTCTTTTC
TAAGGTCTTCACCAAGATGCTTGCAACATTCAATTTCAATGCAAGTAAAG
GCCATGCGACAAGTTCAAACTTGCAGCCAAGGTATCCGCCTTCTGGCACA
TCTTATCCTGGCACAGGGACCACCCCAGTATCCTACGGAAGCAATCAGAC
ATCTTCTGGTTTCCAGACAAATAGTGGCTGGGGGCAAGGACATCAGAACA
TTTCAGGCTCCTCATTCTCCTCATCAGGAGTGGCATCAGCATCCCCTCCC
ATCTACCCAGGTCCAACCCAGACATACATCGCTGCAAGTTCTTCTTCTTA
CCCACATGGAACGTCAGTACCAACATACCCTCATCTTACTCAAAACAAGT
CTAATAATGGTGTTGACATGTCACATACTTATCCTGGGGCCAACCAGACA
AGTCAGCCACTTCCACCCATCCAGCAAGCACATTCTACAACAAGTCAGAG
CATGTCACAATTGTCCTCACCAGGAGTAGCATCATCAGCTTCCTCTGCAT
CTGGAAACTCTGACAAAGACGACGAGTGCCCAATCTGCCTCTGTGACTTC
ACTGGGCCTGTGACGACAACACCTTGTAAGCACAAGTTCTGTGCTGACTG
CCTAAAGAGTGCCTTGAAGCTTTCTGGACAGTGTCCCGTCTGCAAATCTG
TCATCGGACGACTGAAAGGCAACCAGCCCCGTGGGACAATGACAGATCGC
ATTGACTACCTAAACACCCTTCCTGGGTATGAATACTGCCGTTCAATAAT
CGAAATCCACTACAACTTCCCTGATGGTGTACAAGGGCCAGAGCATCCAA
ACCCAGGGAAACACTACACTGGAACATCACGCACAGCCTATCTGCCGGAC
ACCACAGAGGGCCGCGAGGTGCTCCGTCTCCTGAAACGGGCCTTTGACAG
CGGTCTTGTGTTCACCATCGGCACATCAGTGACTACAGGACAGACTGATA
CTGTGGTCTGGAATGACATCCACCACAAAACCAGCAAGTATGGCGGTCCT
AACAGCTATGGCTACCCTGATCCCCAGTATTTGACAAGAGTGAAGGAGGA
ACTGGCTGCAAAGGGCATCAAGTAGATGGCTGCCACTGATCTGAAGGCTG
TGTCTATTGCTATGCCTGCCATCAGTTCAGGTGCATGTGGAATGCCCAGA
GATCTTTGCGCTGAGTCCATGTTTAGTGCCATTACAGACTTCATCGAGAA
TGTCAATCCCAAACATAACACCATTGTTGACATTCGTATCATCGACAATG
ACCGAAGAGCAGCTGAAGTCTTTTCTAAGGTCTTCACCAAGATGCTTGCA
ACATTCAATTTCAATGCAAGTAAAGGCCATGCGACAAGTTCAAACTTGCA
GCCAAGGTATCCGCCTTCTGGCACATCTTATCCTGGCACAGGGACCACCC
CAGTATCCTACGGAAGCAATCAGACATCTTCTGGTTTCCAGACAAATAGT
GGCTGGGGGCAAGGACATCAGAACATTTCAGGCTCCTCATTCTCCTCATC
AGGAGTGGCATCAGCATCCCCTCCCATCTACCCAGGTCCAACCCAGACAT
ACATCGCTGCAAGTTCTTCTTCTTACCCACATGGAACGTCAGTACCAACA
TACCCTCATCTTACTCAAAACAAGTCTAATAATGGTGTTGACATGTCACA
TACTTATCCTGGGGCCAACCAGACAAGTCAGCCACTTCCACCCATCCAGC
AAGCACATTCTACAACAAGTCAGAGCATGTCACAATTGTCCTCACCAGGA
GTAGCATCATCAGCTTCCTCTGCATCTGGAAACTCTGACAAAGACGACGA
GTGCCCAATCTGCCTCTGTGACTTCACTGGGCCTGTGACGACAACACCTT
GTAAGCACAAGTTCTGTGCTGACTGCCTAAAGAGTGCCTTGAAGCTTTCT
GGACAGTGTCCCGTCTGCAAATCTGTCATCGGACGACTGAAAGGCAACCA
GCCCCGTGGGACAATGACAGATCGCATTGACTACCTAAACACCCTTCCTG
GGTATGAATACTGCCGTTCAATAATCGAAATCCACTACAACTTCCCTGAT
GGTGTACAAGGGCCAGAGCATCCAAACCCAGGGAAACACTACACTGGAAC
ATCACGCACAGCCTATCTGCCGGACACCACAGAGGGCCGCGAGGTGCTCC
GTCTCCTGAAACGGGCCTTTGACAGCGGTCTTGTGTTCACCATCGGCACA
TCAGTGACTACAGGACAGACTGATACTGTGGTCTGGAATGACATCCACCA
CAAAACCAGCAAGTATGGCGGTCCTAACAGCTATGGCTACCCTGATCCCC
AGTATTTGACAAGAGTGAAGGAGGAACTGGCTGCAAAGGGCATCAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000104 | genome | Sc0000104:47320..49428 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95734_evm1 |
| Biotype | protein_coding |
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