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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL86384_cuf1 >transcript:BL86384_cuf1-protein ID=transcript:BL86384_cuf1-protein|Name=transcript:BL86384_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=210bp
MADSNYGCQEQEHTGEKPYMCEECGYRTANRSHLSDHMKSHTGEKPFMCG
ECGYRTARKSDLSDHMKFHTGENLFLCGKCGYRTAKKSHLAQHVRTHTGE
KPYMCEECEYRTAQRSHLSRHMRTHTGEKLYKCDQCDFSAAKKSSLNSHG
VKHTGEKPYKCGECEYGTTKKYSLSVHIKSHTVEKPFVCEECGYRTTKKS
HLARRETLQM Run BLAST on NCBI mRNA from alignment at Sc0000083:1218759..1221048+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL86384_cuf1 ID=transcript:BL86384_cuf1|Name=transcript:BL86384_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2290bp|location=Sequence derived from alignment at Sc0000083:1218759..1221048+ (Branchiostoma lanceolatum)
GTGTGTGTGTGTGTGACAAATACTCAATAAGCTTCAAACTATGCATGATG
TTGCAGCTCATGAAACTAGAAGGTAATTTTTCTCCATATATGGTGGTTCA
ACCCAGCTAGTGGACTGTACAGCTGTTTTCTTCATACTCATACTGACAGC
TAGCAAGCACATTGTTACTCTATGTTGTAACATTGATGTATTGTTAGTAA
TTTGTTACGATAAGGCAGGTATGATAAGTACATGTAAGTTATTACCACAA
AACTGATTGTGACTAATTTTGTTTCAAAGCTGATCTTTCAGATAAGTGAT
CAAAGATATGGCAGACTCCAACTATGGATGCCAAGAGCAAGAACACACTG
GTGAGAAACCCTACATGTGTGAGGAGTGTGGGTACAGGACAGCTAATAGG
TCTCACTTATCCGACCATATGAAATCTCATACAGGAGAGAAACCCTTCAT
GTGTGGGGAGTGTGGGTACAGGACAGCTAGAAAGTCTGACTTATCCGACC
ATATGAAATTTCATACAGGAGAAAACCTCTTCTTGTGTGGAAAGTGTGGG
TATAGAACTGCCAAGAAGTCTCACTTAGCCCAGCACGTGAGAACTCATAC
TGGAGAGAAACCCTACATGTGTGAGGAGTGTGAGTACAGGACAGCTCAGA
GGTCTCACTTATCCCGACATATGAGAACTCATACAGGAGAGAAACTCTAC
AAGTGTGACCAGTGTGACTTTTCTGCAGCCAAGAAATCAAGCTTGAACAG
CCATGGAGTAAAGCACACTGGTGAGAAACCATACAAGTGTGGGGAGTGTG
AGTACGGGACAACAAAAAAGTATTCCTTATCTGTCCATATTAAGTCTCAC
ACTGTAGAAAAGCCATTCGTGTGTGAGGAGTGTGGGTACAGAACGACTAA
GAAGTCTCACTTGGCCCGGAGAGAGACCCTACAAATGTGACCAGTGTGAC
TATTCTGCAGCAGATAAATCCAGTTTGGACTACCATCAGGTAAAACACAC
TGGTGAGAAACCCTACATGTGTGGAGAGTGTGGGTACAGGACAGCTAAAA
GGTCTCACTTATCCGACCATATGAAATCTCACAAAGGATAAAAATCCTTC
AAATGTGACCCGTGTGACTATTCTGTTGCCAAAAAATCCCAGTTGGACCA
CAATCAAGTAATAAAACATATTGATGAGAAACCTACATGTGTGGAGAGTG
TGCGTACAGGACAGCTCATAGCTCCATATATGCAGACATCTGAGACCTTA
TATTCTCGAGAAACTCCACATGTGTGACTGTTGTGAATCCCAGAAATCTG
AGTTGGGCAGCCATCAAGGAAATCATACCGGTGAGAAGCCAAGTGTGGGG
AGTGTGAGCACAGAAGAGTTAAGAAGCTTGACTTATCCAAACTCAAGAGA
ACTCATAGGATAAGAAAACCCCAACAGTTGTGACCTGTGTGCCTATTCTG
TTCTGCAGAAATCGGCTATTGACTTCCATCGAGTAAAACACCCGCTTTTG
GTAACAAACCCTGCATGTGTGAGGAGTGTTGGTATGGGACAACTGTGAGG
CCAGACTTATTTCAATATATGAGAACTCATATATAAGAGGCATACATTTC
TAGCCTCTTCTAACGGAACGAGAGAACTTTACGAGCATGTGACATATTGC
AAAGTGGATAGTTGAGAAGTCCATGGATTAGGATAAGATCATTAAGAATA
TTGTATTATACAAAAACGTAAAATTGAAGGTCCTTCATTTTACACTTAAT
GCAGGATTTGTCTCCCCCATTCTGTTTGAAATGATTGTGCCAAACTCTAA
GGTTTTGTGTTCAAATTCATGTAATTTCGTATCTATGTATAACTAGTAAC
CTTAAGTCTTATGAAAATACTTTCCTGTACAAATGTCAGCTAAGGCACTT
TTCATACCAAAGCACAGAACTCAGAATAGATGTGCATGTATGCATGGTTT
TGTGTTCAAATTCATGTAATTTCCTGTACAATGTTTAACTAGTAACTATA
CGTCTTATGAAAATACTTCTCTGTACAAATTTCAGCTAAGGCACTTTTCA
TACCGAGGCACAGAACGCAGAATAGATGTGCATGTATGTATGGTTTTGTG
TTCAAATTTATGTAATTCCCTGTACAATATATAACTAGTAACTATAGTCT
TATGAAAATACTTTTCTGTACAACCTTCAGCTAAGGTACTTTTCATACCG
AAGCACAGAACGGAGAATAGATGTGCATGTTTATGATATTATCTTTTGAT
AACTTGTGTCATCCCTAACATGGATAATTTAAGGTGTGGG Coding sequence (CDS) from alignment at Sc0000083:1218759..1221048+ >transcript:BL86384_cuf1 ID=transcript:BL86384_cuf1|Name=transcript:BL86384_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=633bp|location=Sequence derived from alignment at Sc0000083:1218759..1221048+ (Branchiostoma lanceolatum)
ATGGCAGACTCCAACTATGGATGCCAAGAGCAAGAACACACTGGTGAGAA
ACCCTACATGTGTGAGGAGTGTGGGTACAGGACAGCTAATAGGTCTCACT
TATCCGACCATATGAAATCTCATACAGGAGAGAAACCCTTCATGTGTGGG
GAGTGTGGGTACAGGACAGCTAGAAAGTCTGACTTATCCGACCATATGAA
ATTTCATACAGGAGAAAACCTCTTCTTGTGTGGAAAGTGTGGGTATAGAA
CTGCCAAGAAGTCTCACTTAGCCCAGCACGTGAGAACTCATACTGGAGAG
AAACCCTACATGTGTGAGGAGTGTGAGTACAGGACAGCTCAGAGGTCTCA
CTTATCCCGACATATGAGAACTCATACAGGAGAGAAACTCTACAAGTGTG
ACCAGTGTGACTTTTCTGCAGCCAAGAAATCAAGCTTGAACAGCCATGGA
GTAAAGCACACTGGTGAGAAACCATACAAGTGTGGGGAGTGTGAGTACGG
GACAACAAAAAAGTATTCCTTATCTGTCCATATTAAGTCTCACACTGTAG
AAAAGCCATTCGTGTGTGAGGAGTGTGGGTACAGAACGACTAAGAAGTCT
CACTTGGCCCGGAGAGAGACCCTACAAATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000083 | genome | Sc0000083:1218759..1221048 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL86384_cuf1 |
| Biotype | protein_coding |
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