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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95602_evm2 >transcript:BL95602_evm2-protein ID=transcript:BL95602_evm2-protein|Name=transcript:BL95602_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=232bp
MEPYCIADLPCADIDVKFEQMKIMNAEIPTNGTALFTACISGDVDMVRLL
LRKGASVTKRVCSLTPLHAAATDGKTELVELPVQHGATLDVRDGYQNTPL
MNACSNKHVDTVRRLIELGARPDLTDGYIARRLRIGVENLDSGDESIKLI
QEARKTKLLRCCNPKCGKPDYRSALKRCGHCKLTRYCSRDCQAQHWLVGH
KKCCGKDACSTGEGVRPIQNLVKLMTNHTLLN Run BLAST on NCBI mRNA from alignment at Sc0000068:90565..93576- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95602_evm2 ID=transcript:BL95602_evm2|Name=transcript:BL95602_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=3012bp|location=Sequence derived from alignment at Sc0000068:90565..93576- (Branchiostoma lanceolatum)
ATGGAACCTTACTGTATAGCGGACCTACCCTGTATAGCGAAGTACCGAGG
CTGATTTCTAGTATTTTCCCAACGATAGGACGGAGCCTGGTAGAGGCTAG
TATATAGCACAGTATGCAAAGTACAGTACAAAGGCTTGATTTTCTCATAG
GATTCACCAATGACCAAGGAGGTCAAATACAACTCCCTGGATTCACTGAC
GTTCAATCTAGTAGTACTGTTTTATTTTACAAGTCATCAGTTTTGAGTTT
ACATCAGATACACAGATGAAACCTCTCTCAAACTTCAAAGTTGAATGTGA
AAATAGGGCTTTGGATCAGTAGACGATTATTCAAATGTAAATCAACAACT
CAGGAAGGATTTGCACACTTGTAAGTGTGAAGTACAGTGCTGTCTCTGAT
CTGTTCCGCCGGCGCCGTGAGGTCGGATTGGAAAGTCTGGCACGACGGCT
GTGCTAATTATTTAATCACCAATCAGATCTAACGGTGGCAAAGACCGTAT
CCAGCTGGCAAAATGAGTTTTTTATTGCAACCCGAGGGTTGGATACGGTC
TTTGCAACCGTTAGATCTGCTTTGAGATCACTAATCATTCAGTAAACGGC
ATATATCTGTCCTGTGTTTACACAATTTCTTTGTGTCCTTTGTGTGTTGT
AGAACTTTGAAATCCTTCGAAAGCCCGCGCCGATGGATGGAACAAGATGT
AGCCTCCTTGTGTTGATAAAAGTTCTGAGCTACATTATACCAAGGAGCTC
GCAGTTAATAAACCTCCTTGATTGTAGTCAGCTATCAAGTACACCAAGTC
TATATAAAACCTCCTTGAGTACAGTGTACTGTACTAAGTATTTGTTTCAC
TTCAACCCTCATGAAATCTCGCTTGTTAAGTTAATTTTGACTTGATTATG
AATCCCCAAACGCAGGCGCAGATATTGACGTCAAGTTCGAGCAGATGAAG
ATCATGAACGCCGAGATACCAACCAACGGTACAGCATTGTTCACCGCCTG
CATCAGTGGGGATGTCGACATGGTGAGACTGCTACTCCGCAAGGGGGCGT
CTGTGACGAAAAGAGTGTGTTCATTGACACCGCTTCATGCAGCAGCGACT
GACGGTAGGTTTCCATAATCTCCAAGCAGATCCACACCGGGCGCGAAAAT
CGTATGTGGCTGATTGGACCCTCTCTGGCTGACTGGACCTTCTCTGGCTA
GCACATACGATTTTCGCGCCCGGTGTGGATCTGCTTGGAAATTAGGTTTC
CAAACACATGTTTGTCTGTAACTGACTGTAAGGTTAAAAAAAAGATGCCA
ATTGAGGCTATAAAGTAGAAATGCTGGTGGATACGTCTCTTTATCGCGGA
ATGTTTACGGTGATGTAATTTAGACCTCTTGGATCATGGCTATCCAAAAA
CTACAAATATCATATGCGGGTACTAGTATGAAGAATGAAAATGCGTGATC
TACATGTAAGGTTAGTCTATAGCCTAGGCTAGCATGAGCAATTTAACCTC
CTAGGTATGAGCAAGTGCTAGACTACACTCTTGGACAAAGTTAAAGACAT
TGCAATAACGATTTATCAGATTTTCGTGTCGTCTAGCAAAGACCGTGTTG
AAGAAGTGAAAAAATGTTTTAGAATTTATTGCATATTACTTCGTGGAAGG
CAACGTTTGCTTGATATGTATCAAATTTTTGTTTCGCAAATCCAATCTAG
GTAAGACAGAACTGGTGGAACTGCCGGTACAGCATGGTGCAACTTTAGAC
GTACGGGACGGCTACCAGAACACGCCACTCATGAATGCATGTAGCAACAA
ACATGTGGACACAGTTCGGCGACTGATTGAGCTTGGAGCAAGACCTGATT
TGACCGACGGCTACATAGCCAGGAGGTATTTACATACTACATCCTTAGCC
TGAGTGTCATCCTCCGTAGTGACCGCGGGCTTAATGCTTTTTGGTCACTA
ACCACGGAGTTACCAAGCGAAATGCATTGAGACAGCGGTCACTATACGGA
GGATGATACTCAGGCTATCACATCCTTCCAGCAAAATACAGAGCGAAGGT
TAATTGTAAAGAGTATCCTGTGTGAAGATCCCCGGTAGTAATTAGATGGC
ACACACGCTAGCGTGACGGTCGGTGTGTGTGTAACGTTACTAGTATATAG
ATGTATATATTATATAGAATAACTGTATTGCACGACAGTTATACATGGTG
CAAAGTATGGCAAGAATTCTATATATATTTGCCTGGCATATGCTTGCCTC
AATGATTCATGGAGGTTTTATTTTTGGCGCGTTTGTGTTTATTGTTGGTT
CTGCATCAGAGCTGGACACGCTATGGTTTTGTGGCAGATAGGCTTTGATC
TAGATATTTCATCTTTGCATAAAGGTATACTGTTCCAATCCACATGCAAG
AACCCTGATTTCAATCTAAAAAATGAAATCATGTATCTCTTGACAGTTTG
TACGCCGTGCATTATACCATGTGACCCAGCTCCCTAAATGAGTCGCATCT
TTCACCGTAGGTTGAGGATAGGAGTCGAAAACCTTGACAGTGGCGACGAG
AGTATAAAGCTGATACAAGAGGCGAGGAAGACCAAGCTGTTGAGATGCTG
TAACCCGAAGTGCGGCAAACCAGACTATAGGTAGGTTTTGCTAATAAAAC
TTACGGTTCCGTCACTGAAATGTTTTGCTTTTCACTTTGTTTGAGAAGGC
TAACATACTTTGTAATCCGTAATGTGCAAAAATATGCTTCCATCTGAAAG
GTCTTTGATGCCTTTTCTGAATTCTATTCAGTCCTGGAATACTTGTCACC
TCCGATTCACCTGTCACATCTTCTACAGGTCAGCCCTGAAGCGATGTGGA
CACTGCAAGCTGACCCGCTACTGCAGCCGTGACTGTCAGGCACAACACTG
GTTGGTCGGACACAAGAAGTGCTGTGGGAAGGACGCGTGCTCGACTGGCG
AAGGAGTTCGACCCATCCAAAACCTGGTCAAGTTGATGACAAATCACACC
CTACTGAATTAG Coding sequence (CDS) from alignment at Sc0000068:90565..93576- >transcript:BL95602_evm2 ID=transcript:BL95602_evm2|Name=transcript:BL95602_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=3495bp|location=Sequence derived from alignment at Sc0000068:90565..93576- (Branchiostoma lanceolatum)
ATGGAACCTTACTGTATAGCGGACCTACCCTGCGCAGATATTGACGTCAA
GTTCGAGCAGATGAAGATCATGAACGCCGAGATACCAACCAACGGTACAG
CATTGTTCACCGCCTGCATCAGTGGGGATGTCGACATGGTGAGACTGCTA
CTCCGCAAGGGGGCGTCTGTGACGAAAAGAGTGTGTTCATTGACACCGCT
TCATGCAGCAGCGACTGACGGTAAGACAGAACTGGTGGAACTGCCGGTAC
AGCATGGTGCAACTTTAGACGTACGGGACGGCTACCAGAACACGCCACTC
ATGAATGCATGTAGCAACAAACATGTGGACACAGTTCGGCGACTGATTGA
GCTTGGAGCAAGACCTGATTTGACCGACGGCTACATAGCCAGGAGGTTGA
GGATAGGAGTCGAAAACCTTGACAGTGGCGACGAGAGTATAAAGCTGATA
CAAGAGGCGAGGAAGACCAAGCTGTTGAGATGCTGTAACCCGAAGTGCGG
CAAACCAGACTATAGGTCAGCCCTGAAGCGATGTGGACACTGCAAGCTGA
CCCGCTACTGCAGCCGTGACTGTCAGGCACAACACTGGTTGGTCGGACAC
AAGAAGTGCTGTGGGAAGGACGCGTGCTCGACTGGCGAAGGAGTTCGACC
CATCCAAAACCTGGTCAAGTTGATGACAAATCACACCCTACTGAATTAGA
TGGAACCTTACTGTATAGCGGACCTACCCTGCGCAGATATTGACGTCAAG
TTCGAGCAGATGAAGATCATGAACGCCGAGATACCAACCAACGGTACAGC
ATTGTTCACCGCCTGCATCAGTGGGGATGTCGACATGGTGAGACTGCTAC
TCCGCAAGGGGGCGTCTGTGACGAAAAGAGTGTGTTCATTGACACCGCTT
CATGCAGCAGCGACTGACGGTAAGACAGAACTGGTGGAACTGCCGGTACA
GCATGGTGCAACTTTAGACGTACGGGACGGCTACCAGAACACGCCACTCA
TGAATGCATGTAGCAACAAACATGTGGACACAGTTCGGCGACTGATTGAG
CTTGGAGCAAGACCTGATTTGACCGACGGCTACATAGCCAGGAGGTTGAG
GATAGGAGTCGAAAACCTTGACAGTGGCGACGAGAGTATAAAGCTGATAC
AAGAGGCGAGGAAGACCAAGCTGTTGAGATGCTGTAACCCGAAGTGCGGC
AAACCAGACTATAGGTCAGCCCTGAAGCGATGTGGACACTGCAAGCTGAC
CCGCTACTGCAGCCGTGACTGTCAGGCACAACACTGGTTGGTCGGACACA
AGAAGTGCTGTGGGAAGGACGCGTGCTCGACTGGCGAAGGAGTTCGACCC
ATCCAAAACCTGGTCAAGTTGATGACAAATCACACCCTACTGAATTAGAT
GGAACCTTACTGTATAGCGGACCTACCCTGCGCAGATATTGACGTCAAGT
TCGAGCAGATGAAGATCATGAACGCCGAGATACCAACCAACGGTACAGCA
TTGTTCACCGCCTGCATCAGTGGGGATGTCGACATGGTGAGACTGCTACT
CCGCAAGGGGGCGTCTGTGACGAAAAGAGTGTGTTCATTGACACCGCTTC
ATGCAGCAGCGACTGACGGTAAGACAGAACTGGTGGAACTGCCGGTACAG
CATGGTGCAACTTTAGACGTACGGGACGGCTACCAGAACACGCCACTCAT
GAATGCATGTAGCAACAAACATGTGGACACAGTTCGGCGACTGATTGAGC
TTGGAGCAAGACCTGATTTGACCGACGGCTACATAGCCAGGAGGTTGAGG
ATAGGAGTCGAAAACCTTGACAGTGGCGACGAGAGTATAAAGCTGATACA
AGAGGCGAGGAAGACCAAGCTGTTGAGATGCTGTAACCCGAAGTGCGGCA
AACCAGACTATAGGTCAGCCCTGAAGCGATGTGGACACTGCAAGCTGACC
CGCTACTGCAGCCGTGACTGTCAGGCACAACACTGGTTGGTCGGACACAA
GAAGTGCTGTGGGAAGGACGCGTGCTCGACTGGCGAAGGAGTTCGACCCA
TCCAAAACCTGGTCAAGTTGATGACAAATCACACCCTACTGAATTAGATG
GAACCTTACTGTATAGCGGACCTACCCTGCGCAGATATTGACGTCAAGTT
CGAGCAGATGAAGATCATGAACGCCGAGATACCAACCAACGGTACAGCAT
TGTTCACCGCCTGCATCAGTGGGGATGTCGACATGGTGAGACTGCTACTC
CGCAAGGGGGCGTCTGTGACGAAAAGAGTGTGTTCATTGACACCGCTTCA
TGCAGCAGCGACTGACGGTAAGACAGAACTGGTGGAACTGCCGGTACAGC
ATGGTGCAACTTTAGACGTACGGGACGGCTACCAGAACACGCCACTCATG
AATGCATGTAGCAACAAACATGTGGACACAGTTCGGCGACTGATTGAGCT
TGGAGCAAGACCTGATTTGACCGACGGCTACATAGCCAGGAGGTTGAGGA
TAGGAGTCGAAAACCTTGACAGTGGCGACGAGAGTATAAAGCTGATACAA
GAGGCGAGGAAGACCAAGCTGTTGAGATGCTGTAACCCGAAGTGCGGCAA
ACCAGACTATAGGTCAGCCCTGAAGCGATGTGGACACTGCAAGCTGACCC
GCTACTGCAGCCGTGACTGTCAGGCACAACACTGGTTGGTCGGACACAAG
AAGTGCTGTGGGAAGGACGCGTGCTCGACTGGCGAAGGAGTTCGACCCAT
CCAAAACCTGGTCAAGTTGATGACAAATCACACCCTACTGAATTAGATGG
AACCTTACTGTATAGCGGACCTACCCTGCGCAGATATTGACGTCAAGTTC
GAGCAGATGAAGATCATGAACGCCGAGATACCAACCAACGGTACAGCATT
GTTCACCGCCTGCATCAGTGGGGATGTCGACATGGTGAGACTGCTACTCC
GCAAGGGGGCGTCTGTGACGAAAAGAGTGTGTTCATTGACACCGCTTCAT
GCAGCAGCGACTGACGGTAAGACAGAACTGGTGGAACTGCCGGTACAGCA
TGGTGCAACTTTAGACGTACGGGACGGCTACCAGAACACGCCACTCATGA
ATGCATGTAGCAACAAACATGTGGACACAGTTCGGCGACTGATTGAGCTT
GGAGCAAGACCTGATTTGACCGACGGCTACATAGCCAGGAGGTTGAGGAT
AGGAGTCGAAAACCTTGACAGTGGCGACGAGAGTATAAAGCTGATACAAG
AGGCGAGGAAGACCAAGCTGTTGAGATGCTGTAACCCGAAGTGCGGCAAA
CCAGACTATAGGTCAGCCCTGAAGCGATGTGGACACTGCAAGCTGACCCG
CTACTGCAGCCGTGACTGTCAGGCACAACACTGGTTGGTCGGACACAAGA
AGTGCTGTGGGAAGGACGCGTGCTCGACTGGCGAAGGAGTTCGACCCATC
CAAAACCTGGTCAAGTTGATGACAAATCACACCCTACTGAATTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000068 | genome | Sc0000068:90565..93576 - |
Properties
| Property Name | Value |
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| Transcript id | BL95602_evm2 |
| Biotype | protein_coding |
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