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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95357_evm1 >transcript:BL95357_evm1-protein ID=transcript:BL95357_evm1-protein|Name=transcript:BL95357_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=319bp
MCAIDIPHTNLQACFLGETSVQLRDGRKIAMKDLKPGDWVKVVKPDGRIE
YSKFIAMLHYEPDKKTTFLQIYVEGKSGPVCLTANHLIYATERHPQANIG
RPVFAKDVKEGMFVFVADEENKKAVPAKVREVREVDATGFCAPLTKEGSI
MADGVAASCYANVDHEISHKAFGPLRLLYGVKSILGGKGKERKLDEKERC
PIFTKDVKEGMYVFRDDEESKKVVPAKVREVSEIELCGFVAPLTKEGTIM
ADGVAASCYADFDHELAHRAFAPLRLLYGIKSALGGTVKEKEVSKVGIHW
YARALMKGNKFLFHVQSTM Run BLAST on NCBI mRNA from alignment at Sc0000026:1225630..1229746+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95357_evm1 ID=transcript:BL95357_evm1|Name=transcript:BL95357_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4117bp|location=Sequence derived from alignment at Sc0000026:1225630..1229746+ (Branchiostoma lanceolatum)
ATGTGTGCGGTACGGCCGTTTTTTCGTGTATTTTTTTTACTTGGACACGT
CTATATCCATAGCACTCTCCTCAAGCCAAGGATGGAACGAATAGCTGCTG
TATAAAATGTGATTAGCGGTAAGATATTCAAGACGAATCTTCTCTCCCGA
ATTAATGTGCCCCCCTGTCCGACAGCACCGTAATTGTGCGTGCGGCGGAC
GGTAGTTTCAAGTTGAAATATTATGGTGTCAGCACGACTAGAGACAAAAT
CTACCATATATATGATTAGTGCAAAGATAGTACATGATACTGACAGAATA
ATAGAAAAAAAGGATGGTTTATTGTTCTGCTAGATTGATTTCAGTCAACC
ATTATCGGAAAAATCCCGAATTTATGTTACCCAACGTTACATTTATGTTA
AAGCAAGAGTAATTTTTGTAAAGTCTCTTTTTTCTAACATCGTTATGTCT
TTCCATTTCAGATAGATATACCTCATACCAACCTCCAAGGTATGACAACC
ATGATGATGATTGGTGTAAGTTTTTCGAAGTTGTTTTTTTTCATCTTCGT
CAACGAAATCTTAGCCCATAGCCAAGCCTTATTTTCCTTCAGTGTCGCTT
AATTTGAATTGGTATTCGTAGTGCCGTTTGAAGCAGAAAAAAACAGACCA
TTTCTCTAGTTTTCAGGCAAGAAAAATGTCAAGCCTTTAGTGCAACAACA
CACTGTGTGACGTTAATTTCTTTAAACAGGTCAGAATTTTAAATGTGTTG
TGACATGTAATTCAATGTGGTCACGTGGAAAGCCTGTGGTGCTGTCCTTT
TCGTACTTCATTCATCCGGCAGCATTGAAAAGCAACTTAGAACACAAGAC
ACGTAGGCCTAGGGCTAGATGCGCATGCGTTCCAGATAGATGAACGTTCT
GCAATTCCTTTTTTTTAGTATTACTTTGTCTACAAAATGGCACCACAAGG
CCTGAAGAGTTGCGGTGGAAGTGGCGATTGTTGCGGTACAAATATAGTCC
CTTAGTTACAGTTATTTCATTTCGTACCTCAAAACAGCGGGTAATTTCTG
CAAACTGCGAGGGAAATTCCTGAATTTTTCTTTGCACGAAGTGTACAATT
TCACTCGTGTAAATATTATTGCTGCTGGGTTTTTTTTCAGCCTGTTTCCT
CGGCGAGACCAGTGTTCAGCTTCGTGATGGCCGTAAAATCGCCATGAAGG
ACCTGAAGCCTGGGGACTGGGTCAAAGTCGTGAAGCCCGATGGCCGAATC
GAGTACAGCAAGTTCATCGCCATGCTTCACTACGAACCAGACAAGAAAAC
GACATTCCTCCAAATCTACGTCGAGGGGAAGAGTGGACCAGTTTGTCTGA
CTGCCAACCATCTGATTTACGCCACCGAACGCCACCCACAAGCAAACATC
GGTAGGTTTTTCTCCATAACATTTATTCTAGGGACTATTTGGGGGTTAAA
ATGTTCGCAAGACACGGTAGCTGATATTTTCCCACTTTTGGATAAAACAA
AATGGCGCATCCTCCCCATTTTTTCTTCTTTGCTAAGTCGCTAAAACTGC
GTTATTCTACCCACTAGGGCGTCCTGTTTTTGCCAAAGACGTAAAAGAGG
GGATGTTCGTCTTTGTGGCCGACGAAGAAAACAAGAAAGCGGTCCCGGCC
AAGGTGCGAGAGGTCCGAGAGGTGGACGCAACAGGATTCTGTGCGCCGCT
AACTAAAGAAGGATCCATCATGGCGGACGGCGTGGCGGCTTCGTGTTATG
CCAACGTTGACCACGAGATCTCTCACAAGGCCTTCGGCCCTCTCCGTCTC
CTGTACGGGGTCAAGTCAATCTTGGGAGGCAAAGGCAAAGAGAGGAAGGT
GACCAAAGTTGGCATTCACTGGTATGCTAAGGCCCTGATAAAAGGGAATA
AGTTTTTGTTCCATGTGCGCCCTGCTACAGGGCCCGGGCGACAGTGTCTT
TGAGCCAGAAGCATAGTACTAAAAAAACAAACAAATGCGTTTTAAGATTC
TCCTTAAGCTAACGTAGGCAGACTTATACTTGACTGGATTGTATAGAATA
GATACATATTAAGAGTAGTCTTCTGTTATTATGTTAACCGTTGTTTTCTA
CTTCTTCGTTGTTGTTTTTTTCTCTACATCTGTAATAAACGAACTAGGTT
ATGTTGGATATCTTTTATATTACATCCCTGTACAAACTAATGTAGTCTGC
ACATACATGCATAAAACTGACAGATGTGATAAAATTATATTACTCTAGAG
TTCACATGCACATTTTTTGTAATACGCAAATAATTTACCATCTAATGTAA
ACTCAGAAAGTGTGTCAAAGAAAAGAATGCAAATTTTGATTTTGCATTAA
AAGAACCTATATTTCGGTATGTTTGTTTAGCGTTTTCCACCTTACTTGGT
GTTTACATGACTCTACATGGGTGTATGATAAGGTATTTCTGATGCTCAGT
TTATTTAGTGCTTTTTTCCATCTGTGTGTTCATATCAGTTACATATGAGC
TTGAATTTGTAGACAAAAGCCTCAAGGTCATAGTCCTGTAGAATACTATC
ACTGTACAACTACTGTACCAATATTGTAGTCAGTGAAAACTCAGACATTA
ATTTCCTATGATATTTGCTTCAATATATGCCTCATATGTCCTTGCACAGT
TGGATGAAAAAGAGAGTAAGGTTGTAGTGGCCAACAGAAAGCTAAAAGCT
ACCGCCCACAGTCATGTAGAATATGACAACACATACTGTAAATCTACCAT
ACCAATATCACAACTTGTGAATTTCGATCCTCTGTACTTTAATCTAGACA
GTAACAGTAGTTGCTTGATGATATTTCTGCTATATGGAATAAATCATATT
TGTTTATCAATCTATGCTACTGTTTTTCTTGTAAAGAGCAATTAAGCATT
ATCTACTATAGATATATTAAAGGGACATAAACGTGTAAACGTTTTGAAAT
GATATAAATGTGAAGATATATATGAATGAATGAATAAATGAATGAAAAAT
TTATCACCGTGTCTTGCGCCATTTTGCGCCCAGCCCGTGCGGGCTTATAA
GACACCATTAATCACATGGGCAAGAATTCTTTGAAAGTGCTGTTTGCCAA
CATTATGTGTTAAATTTTGTGCTAACGTCTGGTAGCAAAAACACCTGAAA
TAACACCCAGTGTCCTAGTACCACTCTTTTTGCCAGACCTCAAATTATTC
CTTAATGTTTATATTCTATCACTATTGAGTATATGTGAATTAATAGGATA
AAAAAAGAATTATTTTTGAACTTACAAAATTTGCATTTAGTAATCTTCAA
AATGTTACAATAATAATGCTATAATCTGTATTTTGTAGGCTATGTAAATT
ATATGATTTGAGAATACCTGTGGTTCCTGTTGAAAGACAGTTGTCAATCA
ATTTGAGTGTTTCATGGCAACGCTAATGAGAACAGCTTCTTAATTATAGG
CTCTGTCACAAAACCCGCATGTAGTAAAATCATAACAACAAGATAACGAC
GTTTCTGAAGATCCAAGTCCAGGGGAAGAAAGAGCCAATTTGTTTGACCC
CTAACCATCTCATTTATGCCACCAAGAAGTCTCAAGAAAAACTTGGTAGG
TTTTTTCTCCATAGATTTTACGTTAAGGAAGTTTTTTGTCTGGTCATATT
TGTTGTGATGATACATTCTGGAGTTGACAAAATTACGCTTTTGCGTCATC
TGGTTGCTATGAATGTCAAATTAACCTAAAATAGCTTTGTTATCCACACT
AGGGTGTCCCATTTTTACCAAGGATGTGAAAGAAGGCATGTATGTCTTTC
GGGACGACGAAGAAAGCAAGAAAGTGGTTCCAGCCAAGGTGCGAGAAGTC
TCAGAGATCGAGCTATGCGGATTCGTCGCACCTCTTACAAAGGAAGGGAC
CATTATGGCGGATGGTGTGGCGGCGTCATGCTATGCAGACTTCGACCACG
AGCTTGCTCATAGAGCGTTCGCGCCGCTTCGTCTCTTGTACGGGATAAAG
TCGGCCCTAGGAGGCACAGTCAAAGAGAAGGAGGTGTCTAAAGTTGGTAT
CCACTGGTATGCCAGGGCCCTCATGAAAGGGAACAAGTTTTTGTTCCATG
TGCAGTCAACTATGTAA Coding sequence (CDS) from alignment at Sc0000026:1225630..1229746+ >transcript:BL95357_evm1 ID=transcript:BL95357_evm1|Name=transcript:BL95357_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5760bp|location=Sequence derived from alignment at Sc0000026:1225630..1229746+ (Branchiostoma lanceolatum)
ATGTGTGCGATAGATATACCTCATACCAACCTCCAAGCCTGTTTCCTCGG
CGAGACCAGTGTTCAGCTTCGTGATGGCCGTAAAATCGCCATGAAGGACC
TGAAGCCTGGGGACTGGGTCAAAGTCGTGAAGCCCGATGGCCGAATCGAG
TACAGCAAGTTCATCGCCATGCTTCACTACGAACCAGACAAGAAAACGAC
ATTCCTCCAAATCTACGTCGAGGGGAAGAGTGGACCAGTTTGTCTGACTG
CCAACCATCTGATTTACGCCACCGAACGCCACCCACAAGCAAACATCGGG
CGTCCTGTTTTTGCCAAAGACGTAAAAGAGGGGATGTTCGTCTTTGTGGC
CGACGAAGAAAACAAGAAAGCGGTCCCGGCCAAGGTGCGAGAGGTCCGAG
AGGTGGACGCAACAGGATTCTGTGCGCCGCTAACTAAAGAAGGATCCATC
ATGGCGGACGGCGTGGCGGCTTCGTGTTATGCCAACGTTGACCACGAGAT
CTCTCACAAGGCCTTCGGCCCTCTCCGTCTCCTGTACGGGGTCAAGTCAA
TCTTGGGAGGCAAAGGCAAAGAGAGGAAGTTGGATGAAAAAGAGAGGTGT
CCCATTTTTACCAAGGATGTGAAAGAAGGCATGTATGTCTTTCGGGACGA
CGAAGAAAGCAAGAAAGTGGTTCCAGCCAAGGTGCGAGAAGTCTCAGAGA
TCGAGCTATGCGGATTCGTCGCACCTCTTACAAAGGAAGGGACCATTATG
GCGGATGGTGTGGCGGCGTCATGCTATGCAGACTTCGACCACGAGCTTGC
TCATAGAGCGTTCGCGCCGCTTCGTCTCTTGTACGGGATAAAGTCGGCCC
TAGGAGGCACAGTCAAAGAGAAGGAGGTGTCTAAAGTTGGTATCCACTGG
TATGCCAGGGCCCTCATGAAAGGGAACAAGTTTTTGTTCCATGTGCAGTC
AACTATGTAAATGTGTGCGATAGATATACCTCATACCAACCTCCAAGCCT
GTTTCCTCGGCGAGACCAGTGTTCAGCTTCGTGATGGCCGTAAAATCGCC
ATGAAGGACCTGAAGCCTGGGGACTGGGTCAAAGTCGTGAAGCCCGATGG
CCGAATCGAGTACAGCAAGTTCATCGCCATGCTTCACTACGAACCAGACA
AGAAAACGACATTCCTCCAAATCTACGTCGAGGGGAAGAGTGGACCAGTT
TGTCTGACTGCCAACCATCTGATTTACGCCACCGAACGCCACCCACAAGC
AAACATCGGGCGTCCTGTTTTTGCCAAAGACGTAAAAGAGGGGATGTTCG
TCTTTGTGGCCGACGAAGAAAACAAGAAAGCGGTCCCGGCCAAGGTGCGA
GAGGTCCGAGAGGTGGACGCAACAGGATTCTGTGCGCCGCTAACTAAAGA
AGGATCCATCATGGCGGACGGCGTGGCGGCTTCGTGTTATGCCAACGTTG
ACCACGAGATCTCTCACAAGGCCTTCGGCCCTCTCCGTCTCCTGTACGGG
GTCAAGTCAATCTTGGGAGGCAAAGGCAAAGAGAGGAAGTTGGATGAAAA
AGAGAGGTGTCCCATTTTTACCAAGGATGTGAAAGAAGGCATGTATGTCT
TTCGGGACGACGAAGAAAGCAAGAAAGTGGTTCCAGCCAAGGTGCGAGAA
GTCTCAGAGATCGAGCTATGCGGATTCGTCGCACCTCTTACAAAGGAAGG
GACCATTATGGCGGATGGTGTGGCGGCGTCATGCTATGCAGACTTCGACC
ACGAGCTTGCTCATAGAGCGTTCGCGCCGCTTCGTCTCTTGTACGGGATA
AAGTCGGCCCTAGGAGGCACAGTCAAAGAGAAGGAGGTGTCTAAAGTTGG
TATCCACTGGTATGCCAGGGCCCTCATGAAAGGGAACAAGTTTTTGTTCC
ATGTGCAGTCAACTATGTAAATGTGTGCGATAGATATACCTCATACCAAC
CTCCAAGCCTGTTTCCTCGGCGAGACCAGTGTTCAGCTTCGTGATGGCCG
TAAAATCGCCATGAAGGACCTGAAGCCTGGGGACTGGGTCAAAGTCGTGA
AGCCCGATGGCCGAATCGAGTACAGCAAGTTCATCGCCATGCTTCACTAC
GAACCAGACAAGAAAACGACATTCCTCCAAATCTACGTCGAGGGGAAGAG
TGGACCAGTTTGTCTGACTGCCAACCATCTGATTTACGCCACCGAACGCC
ACCCACAAGCAAACATCGGGCGTCCTGTTTTTGCCAAAGACGTAAAAGAG
GGGATGTTCGTCTTTGTGGCCGACGAAGAAAACAAGAAAGCGGTCCCGGC
CAAGGTGCGAGAGGTCCGAGAGGTGGACGCAACAGGATTCTGTGCGCCGC
TAACTAAAGAAGGATCCATCATGGCGGACGGCGTGGCGGCTTCGTGTTAT
GCCAACGTTGACCACGAGATCTCTCACAAGGCCTTCGGCCCTCTCCGTCT
CCTGTACGGGGTCAAGTCAATCTTGGGAGGCAAAGGCAAAGAGAGGAAGT
TGGATGAAAAAGAGAGGTGTCCCATTTTTACCAAGGATGTGAAAGAAGGC
ATGTATGTCTTTCGGGACGACGAAGAAAGCAAGAAAGTGGTTCCAGCCAA
GGTGCGAGAAGTCTCAGAGATCGAGCTATGCGGATTCGTCGCACCTCTTA
CAAAGGAAGGGACCATTATGGCGGATGGTGTGGCGGCGTCATGCTATGCA
GACTTCGACCACGAGCTTGCTCATAGAGCGTTCGCGCCGCTTCGTCTCTT
GTACGGGATAAAGTCGGCCCTAGGAGGCACAGTCAAAGAGAAGGAGGTGT
CTAAAGTTGGTATCCACTGGTATGCCAGGGCCCTCATGAAAGGGAACAAG
TTTTTGTTCCATGTGCAGTCAACTATGTAAATGTGTGCGATAGATATACC
TCATACCAACCTCCAAGCCTGTTTCCTCGGCGAGACCAGTGTTCAGCTTC
GTGATGGCCGTAAAATCGCCATGAAGGACCTGAAGCCTGGGGACTGGGTC
AAAGTCGTGAAGCCCGATGGCCGAATCGAGTACAGCAAGTTCATCGCCAT
GCTTCACTACGAACCAGACAAGAAAACGACATTCCTCCAAATCTACGTCG
AGGGGAAGAGTGGACCAGTTTGTCTGACTGCCAACCATCTGATTTACGCC
ACCGAACGCCACCCACAAGCAAACATCGGGCGTCCTGTTTTTGCCAAAGA
CGTAAAAGAGGGGATGTTCGTCTTTGTGGCCGACGAAGAAAACAAGAAAG
CGGTCCCGGCCAAGGTGCGAGAGGTCCGAGAGGTGGACGCAACAGGATTC
TGTGCGCCGCTAACTAAAGAAGGATCCATCATGGCGGACGGCGTGGCGGC
TTCGTGTTATGCCAACGTTGACCACGAGATCTCTCACAAGGCCTTCGGCC
CTCTCCGTCTCCTGTACGGGGTCAAGTCAATCTTGGGAGGCAAAGGCAAA
GAGAGGAAGTTGGATGAAAAAGAGAGGTGTCCCATTTTTACCAAGGATGT
GAAAGAAGGCATGTATGTCTTTCGGGACGACGAAGAAAGCAAGAAAGTGG
TTCCAGCCAAGGTGCGAGAAGTCTCAGAGATCGAGCTATGCGGATTCGTC
GCACCTCTTACAAAGGAAGGGACCATTATGGCGGATGGTGTGGCGGCGTC
ATGCTATGCAGACTTCGACCACGAGCTTGCTCATAGAGCGTTCGCGCCGC
TTCGTCTCTTGTACGGGATAAAGTCGGCCCTAGGAGGCACAGTCAAAGAG
AAGGAGGTGTCTAAAGTTGGTATCCACTGGTATGCCAGGGCCCTCATGAA
AGGGAACAAGTTTTTGTTCCATGTGCAGTCAACTATGTAAATGTGTGCGA
TAGATATACCTCATACCAACCTCCAAGCCTGTTTCCTCGGCGAGACCAGT
GTTCAGCTTCGTGATGGCCGTAAAATCGCCATGAAGGACCTGAAGCCTGG
GGACTGGGTCAAAGTCGTGAAGCCCGATGGCCGAATCGAGTACAGCAAGT
TCATCGCCATGCTTCACTACGAACCAGACAAGAAAACGACATTCCTCCAA
ATCTACGTCGAGGGGAAGAGTGGACCAGTTTGTCTGACTGCCAACCATCT
GATTTACGCCACCGAACGCCACCCACAAGCAAACATCGGGCGTCCTGTTT
TTGCCAAAGACGTAAAAGAGGGGATGTTCGTCTTTGTGGCCGACGAAGAA
AACAAGAAAGCGGTCCCGGCCAAGGTGCGAGAGGTCCGAGAGGTGGACGC
AACAGGATTCTGTGCGCCGCTAACTAAAGAAGGATCCATCATGGCGGACG
GCGTGGCGGCTTCGTGTTATGCCAACGTTGACCACGAGATCTCTCACAAG
GCCTTCGGCCCTCTCCGTCTCCTGTACGGGGTCAAGTCAATCTTGGGAGG
CAAAGGCAAAGAGAGGAAGTTGGATGAAAAAGAGAGGTGTCCCATTTTTA
CCAAGGATGTGAAAGAAGGCATGTATGTCTTTCGGGACGACGAAGAAAGC
AAGAAAGTGGTTCCAGCCAAGGTGCGAGAAGTCTCAGAGATCGAGCTATG
CGGATTCGTCGCACCTCTTACAAAGGAAGGGACCATTATGGCGGATGGTG
TGGCGGCGTCATGCTATGCAGACTTCGACCACGAGCTTGCTCATAGAGCG
TTCGCGCCGCTTCGTCTCTTGTACGGGATAAAGTCGGCCCTAGGAGGCAC
AGTCAAAGAGAAGGAGGTGTCTAAAGTTGGTATCCACTGGTATGCCAGGG
CCCTCATGAAAGGGAACAAGTTTTTGTTCCATGTGCAGTCAACTATGTAA
ATGTGTGCGATAGATATACCTCATACCAACCTCCAAGCCTGTTTCCTCGG
CGAGACCAGTGTTCAGCTTCGTGATGGCCGTAAAATCGCCATGAAGGACC
TGAAGCCTGGGGACTGGGTCAAAGTCGTGAAGCCCGATGGCCGAATCGAG
TACAGCAAGTTCATCGCCATGCTTCACTACGAACCAGACAAGAAAACGAC
ATTCCTCCAAATCTACGTCGAGGGGAAGAGTGGACCAGTTTGTCTGACTG
CCAACCATCTGATTTACGCCACCGAACGCCACCCACAAGCAAACATCGGG
CGTCCTGTTTTTGCCAAAGACGTAAAAGAGGGGATGTTCGTCTTTGTGGC
CGACGAAGAAAACAAGAAAGCGGTCCCGGCCAAGGTGCGAGAGGTCCGAG
AGGTGGACGCAACAGGATTCTGTGCGCCGCTAACTAAAGAAGGATCCATC
ATGGCGGACGGCGTGGCGGCTTCGTGTTATGCCAACGTTGACCACGAGAT
CTCTCACAAGGCCTTCGGCCCTCTCCGTCTCCTGTACGGGGTCAAGTCAA
TCTTGGGAGGCAAAGGCAAAGAGAGGAAGTTGGATGAAAAAGAGAGGTGT
CCCATTTTTACCAAGGATGTGAAAGAAGGCATGTATGTCTTTCGGGACGA
CGAAGAAAGCAAGAAAGTGGTTCCAGCCAAGGTGCGAGAAGTCTCAGAGA
TCGAGCTATGCGGATTCGTCGCACCTCTTACAAAGGAAGGGACCATTATG
GCGGATGGTGTGGCGGCGTCATGCTATGCAGACTTCGACCACGAGCTTGC
TCATAGAGCGTTCGCGCCGCTTCGTCTCTTGTACGGGATAAAGTCGGCCC
TAGGAGGCACAGTCAAAGAGAAGGAGGTGTCTAAAGTTGGTATCCACTGG
TATGCCAGGGCCCTCATGAAAGGGAACAAGTTTTTGTTCCATGTGCAGTC
AACTATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000026 | genome | Sc0000026:1225630..1229746 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95357_evm1 |
| Biotype | protein_coding |
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