transcript:BL70658_cuf2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL70658_cuf2
Unique Nametranscript:BL70658_cuf2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL70658_cuf2

>transcript:BL70658_cuf2-protein ID=transcript:BL70658_cuf2-protein|Name=transcript:BL70658_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=540bp
MLRRLFFCLHLLVITFFQVSANMEWDCKLCDPGYFMVSPCANGLPNSTVC
EMCKGRSFTPTYNNETSCIRCREPNQVVYSDEDTPIACRCARGFHKKHST
CVRNTFCRPGKGVHRGGCLDCLEGQFSNAYSNTQHCRPWTNCTARGMVTL
SDGTSRRDAICKDTSVARGRRRHNRKRTEGEREMVTNATKVQAKNAEKRI
LRQKGSSSASSIELTSTKNTTTTTSMPITTSDQLISHAKLLPTVPGDDPS
YWFFIVITASVITLLLLVITMLMCFCYRGLIKRTSKRKATCKAKEEIGEV
EKPHPVLMSDESFQGECEVSTNPKDIEEHRHANQPPPYHSQDFQPMSTSH
FSINSRENWNHISGHCSDLNQDYEEEETSPKTHIPLGFSVSMEFANTAPA
HSTESLTSTDISSASWQTSPSSVAYRKRIQERLAQAVTNVLSRSAMEHLV
GGLGREWQALAQRLGLTEAEIDHILNKNRSDLDKQIYEMIRKWQQGKTGQ
ASISELYGALLECNMEELHNKLVSLEGPAGCQNEPMKDVL
Run BLAST on NCBI

mRNA from alignment at Sc0000021:1734630..1739529-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL70658_cuf2 ID=transcript:BL70658_cuf2|Name=transcript:BL70658_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=4900bp|location=Sequence derived from alignment at Sc0000021:1734630..1739529- (Branchiostoma lanceolatum)
AAGCCAACTACGCAGGTGGAAAGTCCCCACCGGCCGCAGCGCAATGTTAG GAAACTCGTTGCGCAACTTGCCTTCTAATGACTTTTATTTTGTTCCAAAT TGCTGCTAAATTGTAACAGTAAATACATTTTTCATATCTATCCCAGTAGA CAGGTGTATTACATAAAAAGCTACATATCATTTTAAAAAGTTAACAGTTA CCCAATATCCTCTACAGTGTGTGCCTCCCCTTACTAACTTACTTCCGGTA TTTCACTTTTGGCTAGTTTACGCCTGTCTTAAATTTGCCCTGTCTGTGCA AATCACCATGAAAGTCATGTAACGTCAGTTTGAGTGAGACGATCGAAATG TTAAGGCGACTGTTTTTTTGTCTACATCTGTTGGTACGTATATGTCATAA GGCATTTTACTTACATCGTATAATCCTCCTATCCTCAAGCTTCAGTTCAC TATTTCCTGTTTTTTGTTTTGGACATATATATGTTGGCAAATCTACGGAT TTCTAAACTTTTCTACTTCTCCTAGGTCATCACCTTTTTCCAGGTATCGG CAAATATGGAATGGGATTGTAAGCTTTGTGACCCAGGTATGTACAACGTT ACATGTACCTTGAAATGTGTAGCAACCTTTGTTTACATATTCGTGAGTCT CGGAAGAGAAACATATTTGTATCATGTTATGATGTAGACACTTGTTAATG TCATGACGATTTTGTATTTAATCAAAACCTATAAATCAATGTCTTTTTTA GATAATCGCAATTTGTCATGGACTCTGGTATTGAAACTGTTTACCCAATC AACGTTACAGAAAGCTTTTGATTTATTTCAGGGTACTTCATGGTCAGCCC ATGTGCCAACGGATTGCCAAATTCTACAGTATGTGAAATGTGCAAGGGTA GATCATTTACACCAACGTATAACAATGAGACATCATGCATCAGGTGCCGT GAACCAAATCAAGTCGTTTACTCTGACGAAGACACTCCCATCGCCTGTCG GTGTGCAAGGGGGTTCCATAAGAAACATAGCACATGTGTACGGAATACGT TTTGTCGACCAGGAAAGGGGGTGCACAGAGGTAGGTGCCATTACAAACGT ATAACTTGTTGCTTGGAGTTGATAAGTTATAAGAGCTAAGTCTACCAGCC TAACGATATCGATTGGGCAACAGGATGTTTATTCTATCAGCGCTACAGAT TACCACCCCCCTCCTCCAAAAACAACTACAAAGCAGTGATATGGCAACTA TACTTATTCTAAGACCAGACATACTACTCTCAAGTTTCGCTATTTCATTT TTCATTACCGTCGTTGTTGTCGTTAATCTCCCTCAAATATGATTTCATAT TTCTTTAGGAGGCTGCCTTGATTGCCTTGAAGGACAATTCAGCAACGCAT ATTCCAACACACAGCATTGTCGCCCTTGGACAAAGTAAGTGCACAACATA TTTGAGCACATGACAATTTACCTTGACGTGTTACTTCTCCGCCTTCCAGA CAATAAGGGGGGGGGGGGGTGATACGCAAATTATTATAACGGATACATAC CGATATACAGACATGTATTACTAATAAAAAGCAACTTTTAATCTCGAGTA GTTATTACTATATAACTACATCTTTTAACAGTAATAGACGGGACCACTAC AAAGGTATTTTTGCAAAGTACTATGGAATGTACCAAACCTGTTGTCCTTT ACTTCCAAAGTTGTACCGCACGAGGAATGGTCACATTGTCCGATGGAACG TCAAGAAGGGATGCGATCTGCAAAGATACAAGTGTGGCGAGAGGAAGACG TCGGCACAACAGAAAACGAACGGAAGGCGAAAGAGAAATGGTAACCAATG CAACAAAGGTTCAAGCAAAGAACGCAGGTCAGATATTCCATGTTACCTTT ACTATTCCATGCTTTGGACTAGATATCATGCAAATGTACTAGCTGCAGCT TAAACAATTTTCGCTAATCATAAAGAATTCAGCGTAGATAAGTTGAACTT TGCTTGCTGTCGTTTTATTCTAAGGCTTGTAGACGTAGCCTCTACTTTGC TGTTTAGATAGCTTTACTACTGTGTCTGATCCTGTGGCCCCGGGTAATAA CATGATCACATTTCTTTCCACAGAGAAAAGAATTCTGAGACAGAAAGGGT CATCATCAGCTTCGTCTATAGAACTGACTTCCACGAAAAACACAACAACA ACAACATCAATGCCAATAACAACAAGTGATCAACTCATCTCACATGCGAA GCTTTTACCAACTGTGCCGGGAGATGATCCAAGTTACTGGTTTTTCATCG TCATAACCGCCAGTGTTATCACACTGCTACTGCTTGTTATTACTATGCTT ATGTGCTTTTGTTATAGGGGACTGATAAAGAGAACTTCAAAAAGAAAAGG TGAGTTATTTCACGTACGTATTAATTAACATTTAGACATTTATCTGAACT TTTGCATTTCCTGTATTGGTCAGCAAAGACATGTGACGGCTAATAAAATA CTTGTCTGAAAGACCATTCTATCGATCAATATGAATAGAGTTAAACAAAA GCAAGAAGGGCGTAATTTGTCTAAAATCACTGCATTTCCTAACGTTTGGT AAAATGCTGGTTATCTGGGCAATACTGATCATTAAATAACTGAGCTGCGT GTTGTTTATCAGCAACCTGCAAAGCCAAGGAGGAAATTGGAGAGGTAGAA AAACCGCATCCGGTCTTGATGAGTGACGAATCTTTCCAAGGGGAATGCGA AGTTTCAACAAATCCCAAAGATATTGAGGTAAAGAAACATAGTACTCTTC AGAAAATACAATAAAACAACATACCCTAGGCCTTAGAAATGAATCGTTCT TTTTTTTTTTGGACAAGATTTTTGAATTGCATCAATATCATCGAGGATTT TCCCTGGTGTACAAATAAAAACGTATGTAGTACGCAGCGCATCATGTATA TATATATGTTTATGTTTTGCAATACATAGCTGCTGAATAACGTGTTCACC ATGTATCTGATAATCGTATGTTTATTGTGCACAAAGGAACACCGCCATGC GAATCAACCACCACCGTATCACTCACAAGATTTCCAACCAATGTCAACTA GCCACTTCAGCATTAACAGTCGCGAGGTAAGAACCTAATACTCTTTTGTC ATCTTGTTCAGGGATATGCTTTTTAGTGAGGACCCATAAACTAACAATTT ATGCCATCGTTTATATAGCTACATTGGTGCTCAAAATGTTGAAAACTTCA ATAGTTTGTAGGAACTGTATGAGGCTAAATGATCATTTGGGCTTGACGTT GATGATCTAATATCATATTTGAAACGGTCTTACTCTTTCAAATCTATACA TTACAATACTAGTATAATCAGATATAAGACAAGCAACCACACCTTAACAC TTGTGTTTATAATTATGCATGCGCATTTACAGTTTTTTGCTGCTTCATTA CATCATGATGATGATAATGATCGGTAGGATCATGAGAAGACAACGGAAAA TTCTAACTTTCTTATTTCTTTGACAGAATTGGAATCATATATCTGGACAT TGCAGCGATCTCAATCAAGACTACGAAGAAGAGGAAACCAGTCCAAAAAC CCACATACCCTTAGGTTTTTCTGTCTCCATGGAGTTCGCAAACACGGCGC CTGCGCACTCCACGGAATCTCTGACCAGCACAGACATTTCTTCTGCTTCA TGGCAGACATCTCCCTCAAGCGTGGCATACAGGAAAAGAATCCAGGAACG ACTAGCACAAGCTGTCACAAATGGTCAGTCCATGTGTATCTATTTTACTT CCATAAGCATCCAAAATCGTTCAGTGGTTCTGATTTTCTGAGTATAGGCC AAGTATACTTAGTCTAGTATCTTATCTTTCATTAACATAACCATTGAAAT CACTTACGATGGTTTGCATTTGCACATATGGTAAGTAACTTTTTTCATTT TAAGAAGATCCTTTGTCTTATTACTTAGCGACAAAAGAAGGCAAATTCTC TAGGATGGTACAATGTTAAAGTCTTTATATTATGTAACAGGATTCTCTGT TTCTTGCAGTACTGTCAAGGAGCGCAATGGAGCATCTTGTTGGAGGACTT GGAAGGGAGTGGCAAGCGCTTGCTCAACGTTTGGGGCTTACAGAGGCGGA AATCGATCACATTTTAAACAAAAATAGAAGCGATTTGGACAAACAAATCT ATGAAATGATTAGGAAGTGGCAACAGGGTAAGACAGGACAAGCTTCCATC TCTGAACTGTATGGAGCACTGCTGGAATGCAACATGGAAGAACTGCATAA TAAATTAGTTTCTTTGGAAGGTCCTGCTGGTTGCCAAAACGAACCAATGA AAGATGTCTTGTAATGCCGTTAGTTAATCTCCATACAGGTGTTGGGAAAT CGTAAGATTTTCAGGCTATCCTTTTTTCATCCCAACATTGGAGATTTAAG GCAACGGTATATTGGACTTCGATGATGAAGAAGTATAATTTTGATTATTA CTGCTTAGCATAGCGAAATATTATTCTACTTATTTATACAGCAAAGCATA CAATATGTGATGCTAGTAAACTAAATTGATATCAATCATGAATACTCTTA CATCAACAAGTAGATAGACGCATTCGTCTCTATACCTAGTATAGTCCTTA AAAACAGTGGATGTTTTAGCAAATAGCAAATCGATTCAATGATGGTATGT ATCATTATCAATTGCTTATTGAGCAAAATACAGGGTGTCCAATAGTAGCA GCCAATAGGCTGAATCGATGCCATGATATTACAACGAGTTAGAATCATAG AGTAGAACAAAATATTGTATGGGAATATTGATTATGAAGCTATCTTTGTC AAAATTGTAAAAATAAAAGTTACCAATAAACCAGATCTCTTCCTTGTTTG

Coding sequence (CDS) from alignment at Sc0000021:1734630..1739529-

>transcript:BL70658_cuf2 ID=transcript:BL70658_cuf2|Name=transcript:BL70658_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=16230bp|location=Sequence derived from alignment at Sc0000021:1734630..1739529- (Branchiostoma lanceolatum)
ATGTTAAGGCGACTGTTTTTTTGTCTACATCTGTTGGTCATCACCTTTTT
CCAGGTATCGGCAAATATGGAATGGGATTGTAAGCTTTGTGACCCAGGGT
ACTTCATGGTCAGCCCATGTGCCAACGGATTGCCAAATTCTACAGTATGT
GAAATGTGCAAGGGTAGATCATTTACACCAACGTATAACAATGAGACATC
ATGCATCAGGTGCCGTGAACCAAATCAAGTCGTTTACTCTGACGAAGACA
CTCCCATCGCCTGTCGGTGTGCAAGGGGGTTCCATAAGAAACATAGCACA
TGTGTACGGAATACGTTTTGTCGACCAGGAAAGGGGGTGCACAGAGGAGG
CTGCCTTGATTGCCTTGAAGGACAATTCAGCAACGCATATTCCAACACAC
AGCATTGTCGCCCTTGGACAAATTGTACCGCACGAGGAATGGTCACATTG
TCCGATGGAACGTCAAGAAGGGATGCGATCTGCAAAGATACAAGTGTGGC
GAGAGGAAGACGTCGGCACAACAGAAAACGAACGGAAGGCGAAAGAGAAA
TGGTAACCAATGCAACAAAGGTTCAAGCAAAGAACGCAGAGAAAAGAATT
CTGAGACAGAAAGGGTCATCATCAGCTTCGTCTATAGAACTGACTTCCAC
GAAAAACACAACAACAACAACATCAATGCCAATAACAACAAGTGATCAAC
TCATCTCACATGCGAAGCTTTTACCAACTGTGCCGGGAGATGATCCAAGT
TACTGGTTTTTCATCGTCATAACCGCCAGTGTTATCACACTGCTACTGCT
TGTTATTACTATGCTTATGTGCTTTTGTTATAGGGGACTGATAAAGAGAA
CTTCAAAAAGAAAAGCAACCTGCAAAGCCAAGGAGGAAATTGGAGAGGTA
GAAAAACCGCATCCGGTCTTGATGAGTGACGAATCTTTCCAAGGGGAATG
CGAAGTTTCAACAAATCCCAAAGATATTGAGGAACACCGCCATGCGAATC
AACCACCACCGTATCACTCACAAGATTTCCAACCAATGTCAACTAGCCAC
TTCAGCATTAACAGTCGCGAGAATTGGAATCATATATCTGGACATTGCAG
CGATCTCAATCAAGACTACGAAGAAGAGGAAACCAGTCCAAAAACCCACA
TACCCTTAGGTTTTTCTGTCTCCATGGAGTTCGCAAACACGGCGCCTGCG
CACTCCACGGAATCTCTGACCAGCACAGACATTTCTTCTGCTTCATGGCA
GACATCTCCCTCAAGCGTGGCATACAGGAAAAGAATCCAGGAACGACTAG
CACAAGCTGTCACAAATGTACTGTCAAGGAGCGCAATGGAGCATCTTGTT
GGAGGACTTGGAAGGGAGTGGCAAGCGCTTGCTCAACGTTTGGGGCTTAC
AGAGGCGGAAATCGATCACATTTTAAACAAAAATAGAAGCGATTTGGACA
AACAAATCTATGAAATGATTAGGAAGTGGCAACAGGGTAAGACAGGACAA
GCTTCCATCTCTGAACTGTATGGAGCACTGCTGGAATGCAACATGGAAGA
ACTGCATAATAAATTAGTTTCTTTGGAAGGTCCTGCTGGTTGCCAAAACG
AACCAATGAAAGATGTCTTGTAAATGTTAAGGCGACTGTTTTTTTGTCTA
CATCTGTTGGTCATCACCTTTTTCCAGGTATCGGCAAATATGGAATGGGA
TTGTAAGCTTTGTGACCCAGGGTACTTCATGGTCAGCCCATGTGCCAACG
GATTGCCAAATTCTACAGTATGTGAAATGTGCAAGGGTAGATCATTTACA
CCAACGTATAACAATGAGACATCATGCATCAGGTGCCGTGAACCAAATCA
AGTCGTTTACTCTGACGAAGACACTCCCATCGCCTGTCGGTGTGCAAGGG
GGTTCCATAAGAAACATAGCACATGTGTACGGAATACGTTTTGTCGACCA
GGAAAGGGGGTGCACAGAGGAGGCTGCCTTGATTGCCTTGAAGGACAATT
CAGCAACGCATATTCCAACACACAGCATTGTCGCCCTTGGACAAATTGTA
CCGCACGAGGAATGGTCACATTGTCCGATGGAACGTCAAGAAGGGATGCG
ATCTGCAAAGATACAAGTGTGGCGAGAGGAAGACGTCGGCACAACAGAAA
ACGAACGGAAGGCGAAAGAGAAATGGTAACCAATGCAACAAAGGTTCAAG
CAAAGAACGCAGAGAAAAGAATTCTGAGACAGAAAGGGTCATCATCAGCT
TCGTCTATAGAACTGACTTCCACGAAAAACACAACAACAACAACATCAAT
GCCAATAACAACAAGTGATCAACTCATCTCACATGCGAAGCTTTTACCAA
CTGTGCCGGGAGATGATCCAAGTTACTGGTTTTTCATCGTCATAACCGCC
AGTGTTATCACACTGCTACTGCTTGTTATTACTATGCTTATGTGCTTTTG
TTATAGGGGACTGATAAAGAGAACTTCAAAAAGAAAAGCAACCTGCAAAG
CCAAGGAGGAAATTGGAGAGGTAGAAAAACCGCATCCGGTCTTGATGAGT
GACGAATCTTTCCAAGGGGAATGCGAAGTTTCAACAAATCCCAAAGATAT
TGAGGAACACCGCCATGCGAATCAACCACCACCGTATCACTCACAAGATT
TCCAACCAATGTCAACTAGCCACTTCAGCATTAACAGTCGCGAGAATTGG
AATCATATATCTGGACATTGCAGCGATCTCAATCAAGACTACGAAGAAGA
GGAAACCAGTCCAAAAACCCACATACCCTTAGGTTTTTCTGTCTCCATGG
AGTTCGCAAACACGGCGCCTGCGCACTCCACGGAATCTCTGACCAGCACA
GACATTTCTTCTGCTTCATGGCAGACATCTCCCTCAAGCGTGGCATACAG
GAAAAGAATCCAGGAACGACTAGCACAAGCTGTCACAAATGTACTGTCAA
GGAGCGCAATGGAGCATCTTGTTGGAGGACTTGGAAGGGAGTGGCAAGCG
CTTGCTCAACGTTTGGGGCTTACAGAGGCGGAAATCGATCACATTTTAAA
CAAAAATAGAAGCGATTTGGACAAACAAATCTATGAAATGATTAGGAAGT
GGCAACAGGGTAAGACAGGACAAGCTTCCATCTCTGAACTGTATGGAGCA
CTGCTGGAATGCAACATGGAAGAACTGCATAATAAATTAGTTTCTTTGGA
AGGTCCTGCTGGTTGCCAAAACGAACCAATGAAAGATGTCTTGTAAATGT
TAAGGCGACTGTTTTTTTGTCTACATCTGTTGGTCATCACCTTTTTCCAG
GTATCGGCAAATATGGAATGGGATTGTAAGCTTTGTGACCCAGGGTACTT
CATGGTCAGCCCATGTGCCAACGGATTGCCAAATTCTACAGTATGTGAAA
TGTGCAAGGGTAGATCATTTACACCAACGTATAACAATGAGACATCATGC
ATCAGGTGCCGTGAACCAAATCAAGTCGTTTACTCTGACGAAGACACTCC
CATCGCCTGTCGGTGTGCAAGGGGGTTCCATAAGAAACATAGCACATGTG
TACGGAATACGTTTTGTCGACCAGGAAAGGGGGTGCACAGAGGAGGCTGC
CTTGATTGCCTTGAAGGACAATTCAGCAACGCATATTCCAACACACAGCA
TTGTCGCCCTTGGACAAATTGTACCGCACGAGGAATGGTCACATTGTCCG
ATGGAACGTCAAGAAGGGATGCGATCTGCAAAGATACAAGTGTGGCGAGA
GGAAGACGTCGGCACAACAGAAAACGAACGGAAGGCGAAAGAGAAATGGT
AACCAATGCAACAAAGGTTCAAGCAAAGAACGCAGAGAAAAGAATTCTGA
GACAGAAAGGGTCATCATCAGCTTCGTCTATAGAACTGACTTCCACGAAA
AACACAACAACAACAACATCAATGCCAATAACAACAAGTGATCAACTCAT
CTCACATGCGAAGCTTTTACCAACTGTGCCGGGAGATGATCCAAGTTACT
GGTTTTTCATCGTCATAACCGCCAGTGTTATCACACTGCTACTGCTTGTT
ATTACTATGCTTATGTGCTTTTGTTATAGGGGACTGATAAAGAGAACTTC
AAAAAGAAAAGCAACCTGCAAAGCCAAGGAGGAAATTGGAGAGGTAGAAA
AACCGCATCCGGTCTTGATGAGTGACGAATCTTTCCAAGGGGAATGCGAA
GTTTCAACAAATCCCAAAGATATTGAGGAACACCGCCATGCGAATCAACC
ACCACCGTATCACTCACAAGATTTCCAACCAATGTCAACTAGCCACTTCA
GCATTAACAGTCGCGAGAATTGGAATCATATATCTGGACATTGCAGCGAT
CTCAATCAAGACTACGAAGAAGAGGAAACCAGTCCAAAAACCCACATACC
CTTAGGTTTTTCTGTCTCCATGGAGTTCGCAAACACGGCGCCTGCGCACT
CCACGGAATCTCTGACCAGCACAGACATTTCTTCTGCTTCATGGCAGACA
TCTCCCTCAAGCGTGGCATACAGGAAAAGAATCCAGGAACGACTAGCACA
AGCTGTCACAAATGTACTGTCAAGGAGCGCAATGGAGCATCTTGTTGGAG
GACTTGGAAGGGAGTGGCAAGCGCTTGCTCAACGTTTGGGGCTTACAGAG
GCGGAAATCGATCACATTTTAAACAAAAATAGAAGCGATTTGGACAAACA
AATCTATGAAATGATTAGGAAGTGGCAACAGGGTAAGACAGGACAAGCTT
CCATCTCTGAACTGTATGGAGCACTGCTGGAATGCAACATGGAAGAACTG
CATAATAAATTAGTTTCTTTGGAAGGTCCTGCTGGTTGCCAAAACGAACC
AATGAAAGATGTCTTGTAAATGTTAAGGCGACTGTTTTTTTGTCTACATC
TGTTGGTCATCACCTTTTTCCAGGTATCGGCAAATATGGAATGGGATTGT
AAGCTTTGTGACCCAGGGTACTTCATGGTCAGCCCATGTGCCAACGGATT
GCCAAATTCTACAGTATGTGAAATGTGCAAGGGTAGATCATTTACACCAA
CGTATAACAATGAGACATCATGCATCAGGTGCCGTGAACCAAATCAAGTC
GTTTACTCTGACGAAGACACTCCCATCGCCTGTCGGTGTGCAAGGGGGTT
CCATAAGAAACATAGCACATGTGTACGGAATACGTTTTGTCGACCAGGAA
AGGGGGTGCACAGAGGAGGCTGCCTTGATTGCCTTGAAGGACAATTCAGC
AACGCATATTCCAACACACAGCATTGTCGCCCTTGGACAAATTGTACCGC
ACGAGGAATGGTCACATTGTCCGATGGAACGTCAAGAAGGGATGCGATCT
GCAAAGATACAAGTGTGGCGAGAGGAAGACGTCGGCACAACAGAAAACGA
ACGGAAGGCGAAAGAGAAATGGTAACCAATGCAACAAAGGTTCAAGCAAA
GAACGCAGAGAAAAGAATTCTGAGACAGAAAGGGTCATCATCAGCTTCGT
CTATAGAACTGACTTCCACGAAAAACACAACAACAACAACATCAATGCCA
ATAACAACAAGTGATCAACTCATCTCACATGCGAAGCTTTTACCAACTGT
GCCGGGAGATGATCCAAGTTACTGGTTTTTCATCGTCATAACCGCCAGTG
TTATCACACTGCTACTGCTTGTTATTACTATGCTTATGTGCTTTTGTTAT
AGGGGACTGATAAAGAGAACTTCAAAAAGAAAAGCAACCTGCAAAGCCAA
GGAGGAAATTGGAGAGGTAGAAAAACCGCATCCGGTCTTGATGAGTGACG
AATCTTTCCAAGGGGAATGCGAAGTTTCAACAAATCCCAAAGATATTGAG
GAACACCGCCATGCGAATCAACCACCACCGTATCACTCACAAGATTTCCA
ACCAATGTCAACTAGCCACTTCAGCATTAACAGTCGCGAGAATTGGAATC
ATATATCTGGACATTGCAGCGATCTCAATCAAGACTACGAAGAAGAGGAA
ACCAGTCCAAAAACCCACATACCCTTAGGTTTTTCTGTCTCCATGGAGTT
CGCAAACACGGCGCCTGCGCACTCCACGGAATCTCTGACCAGCACAGACA
TTTCTTCTGCTTCATGGCAGACATCTCCCTCAAGCGTGGCATACAGGAAA
AGAATCCAGGAACGACTAGCACAAGCTGTCACAAATGTACTGTCAAGGAG
CGCAATGGAGCATCTTGTTGGAGGACTTGGAAGGGAGTGGCAAGCGCTTG
CTCAACGTTTGGGGCTTACAGAGGCGGAAATCGATCACATTTTAAACAAA
AATAGAAGCGATTTGGACAAACAAATCTATGAAATGATTAGGAAGTGGCA
ACAGGGTAAGACAGGACAAGCTTCCATCTCTGAACTGTATGGAGCACTGC
TGGAATGCAACATGGAAGAACTGCATAATAAATTAGTTTCTTTGGAAGGT
CCTGCTGGTTGCCAAAACGAACCAATGAAAGATGTCTTGTAAATGTTAAG
GCGACTGTTTTTTTGTCTACATCTGTTGGTCATCACCTTTTTCCAGGTAT
CGGCAAATATGGAATGGGATTGTAAGCTTTGTGACCCAGGGTACTTCATG
GTCAGCCCATGTGCCAACGGATTGCCAAATTCTACAGTATGTGAAATGTG
CAAGGGTAGATCATTTACACCAACGTATAACAATGAGACATCATGCATCA
GGTGCCGTGAACCAAATCAAGTCGTTTACTCTGACGAAGACACTCCCATC
GCCTGTCGGTGTGCAAGGGGGTTCCATAAGAAACATAGCACATGTGTACG
GAATACGTTTTGTCGACCAGGAAAGGGGGTGCACAGAGGAGGCTGCCTTG
ATTGCCTTGAAGGACAATTCAGCAACGCATATTCCAACACACAGCATTGT
CGCCCTTGGACAAATTGTACCGCACGAGGAATGGTCACATTGTCCGATGG
AACGTCAAGAAGGGATGCGATCTGCAAAGATACAAGTGTGGCGAGAGGAA
GACGTCGGCACAACAGAAAACGAACGGAAGGCGAAAGAGAAATGGTAACC
AATGCAACAAAGGTTCAAGCAAAGAACGCAGAGAAAAGAATTCTGAGACA
GAAAGGGTCATCATCAGCTTCGTCTATAGAACTGACTTCCACGAAAAACA
CAACAACAACAACATCAATGCCAATAACAACAAGTGATCAACTCATCTCA
CATGCGAAGCTTTTACCAACTGTGCCGGGAGATGATCCAAGTTACTGGTT
TTTCATCGTCATAACCGCCAGTGTTATCACACTGCTACTGCTTGTTATTA
CTATGCTTATGTGCTTTTGTTATAGGGGACTGATAAAGAGAACTTCAAAA
AGAAAAGCAACCTGCAAAGCCAAGGAGGAAATTGGAGAGGTAGAAAAACC
GCATCCGGTCTTGATGAGTGACGAATCTTTCCAAGGGGAATGCGAAGTTT
CAACAAATCCCAAAGATATTGAGGAACACCGCCATGCGAATCAACCACCA
CCGTATCACTCACAAGATTTCCAACCAATGTCAACTAGCCACTTCAGCAT
TAACAGTCGCGAGAATTGGAATCATATATCTGGACATTGCAGCGATCTCA
ATCAAGACTACGAAGAAGAGGAAACCAGTCCAAAAACCCACATACCCTTA
GGTTTTTCTGTCTCCATGGAGTTCGCAAACACGGCGCCTGCGCACTCCAC
GGAATCTCTGACCAGCACAGACATTTCTTCTGCTTCATGGCAGACATCTC
CCTCAAGCGTGGCATACAGGAAAAGAATCCAGGAACGACTAGCACAAGCT
GTCACAAATGTACTGTCAAGGAGCGCAATGGAGCATCTTGTTGGAGGACT
TGGAAGGGAGTGGCAAGCGCTTGCTCAACGTTTGGGGCTTACAGAGGCGG
AAATCGATCACATTTTAAACAAAAATAGAAGCGATTTGGACAAACAAATC
TATGAAATGATTAGGAAGTGGCAACAGGGTAAGACAGGACAAGCTTCCAT
CTCTGAACTGTATGGAGCACTGCTGGAATGCAACATGGAAGAACTGCATA
ATAAATTAGTTTCTTTGGAAGGTCCTGCTGGTTGCCAAAACGAACCAATG
AAAGATGTCTTGTAAATGTTAAGGCGACTGTTTTTTTGTCTACATCTGTT
GGTCATCACCTTTTTCCAGGTATCGGCAAATATGGAATGGGATTGTAAGC
TTTGTGACCCAGGGTACTTCATGGTCAGCCCATGTGCCAACGGATTGCCA
AATTCTACAGTATGTGAAATGTGCAAGGGTAGATCATTTACACCAACGTA
TAACAATGAGACATCATGCATCAGGTGCCGTGAACCAAATCAAGTCGTTT
ACTCTGACGAAGACACTCCCATCGCCTGTCGGTGTGCAAGGGGGTTCCAT
AAGAAACATAGCACATGTGTACGGAATACGTTTTGTCGACCAGGAAAGGG
GGTGCACAGAGGAGGCTGCCTTGATTGCCTTGAAGGACAATTCAGCAACG
CATATTCCAACACACAGCATTGTCGCCCTTGGACAAATTGTACCGCACGA
GGAATGGTCACATTGTCCGATGGAACGTCAAGAAGGGATGCGATCTGCAA
AGATACAAGTGTGGCGAGAGGAAGACGTCGGCACAACAGAAAACGAACGG
AAGGCGAAAGAGAAATGGTAACCAATGCAACAAAGGTTCAAGCAAAGAAC
GCAGAGAAAAGAATTCTGAGACAGAAAGGGTCATCATCAGCTTCGTCTAT
AGAACTGACTTCCACGAAAAACACAACAACAACAACATCAATGCCAATAA
CAACAAGTGATCAACTCATCTCACATGCGAAGCTTTTACCAACTGTGCCG
GGAGATGATCCAAGTTACTGGTTTTTCATCGTCATAACCGCCAGTGTTAT
CACACTGCTACTGCTTGTTATTACTATGCTTATGTGCTTTTGTTATAGGG
GACTGATAAAGAGAACTTCAAAAAGAAAAGCAACCTGCAAAGCCAAGGAG
GAAATTGGAGAGGTAGAAAAACCGCATCCGGTCTTGATGAGTGACGAATC
TTTCCAAGGGGAATGCGAAGTTTCAACAAATCCCAAAGATATTGAGGAAC
ACCGCCATGCGAATCAACCACCACCGTATCACTCACAAGATTTCCAACCA
ATGTCAACTAGCCACTTCAGCATTAACAGTCGCGAGAATTGGAATCATAT
ATCTGGACATTGCAGCGATCTCAATCAAGACTACGAAGAAGAGGAAACCA
GTCCAAAAACCCACATACCCTTAGGTTTTTCTGTCTCCATGGAGTTCGCA
AACACGGCGCCTGCGCACTCCACGGAATCTCTGACCAGCACAGACATTTC
TTCTGCTTCATGGCAGACATCTCCCTCAAGCGTGGCATACAGGAAAAGAA
TCCAGGAACGACTAGCACAAGCTGTCACAAATGTACTGTCAAGGAGCGCA
ATGGAGCATCTTGTTGGAGGACTTGGAAGGGAGTGGCAAGCGCTTGCTCA
ACGTTTGGGGCTTACAGAGGCGGAAATCGATCACATTTTAAACAAAAATA
GAAGCGATTTGGACAAACAAATCTATGAAATGATTAGGAAGTGGCAACAG
GGTAAGACAGGACAAGCTTCCATCTCTGAACTGTATGGAGCACTGCTGGA
ATGCAACATGGAAGAACTGCATAATAAATTAGTTTCTTTGGAAGGTCCTG
CTGGTTGCCAAAACGAACCAATGAAAGATGTCTTGTAAATGTTAAGGCGA
CTGTTTTTTTGTCTACATCTGTTGGTCATCACCTTTTTCCAGGTATCGGC
AAATATGGAATGGGATTGTAAGCTTTGTGACCCAGGGTACTTCATGGTCA
GCCCATGTGCCAACGGATTGCCAAATTCTACAGTATGTGAAATGTGCAAG
GGTAGATCATTTACACCAACGTATAACAATGAGACATCATGCATCAGGTG
CCGTGAACCAAATCAAGTCGTTTACTCTGACGAAGACACTCCCATCGCCT
GTCGGTGTGCAAGGGGGTTCCATAAGAAACATAGCACATGTGTACGGAAT
ACGTTTTGTCGACCAGGAAAGGGGGTGCACAGAGGAGGCTGCCTTGATTG
CCTTGAAGGACAATTCAGCAACGCATATTCCAACACACAGCATTGTCGCC
CTTGGACAAATTGTACCGCACGAGGAATGGTCACATTGTCCGATGGAACG
TCAAGAAGGGATGCGATCTGCAAAGATACAAGTGTGGCGAGAGGAAGACG
TCGGCACAACAGAAAACGAACGGAAGGCGAAAGAGAAATGGTAACCAATG
CAACAAAGGTTCAAGCAAAGAACGCAGAGAAAAGAATTCTGAGACAGAAA
GGGTCATCATCAGCTTCGTCTATAGAACTGACTTCCACGAAAAACACAAC
AACAACAACATCAATGCCAATAACAACAAGTGATCAACTCATCTCACATG
CGAAGCTTTTACCAACTGTGCCGGGAGATGATCCAAGTTACTGGTTTTTC
ATCGTCATAACCGCCAGTGTTATCACACTGCTACTGCTTGTTATTACTAT
GCTTATGTGCTTTTGTTATAGGGGACTGATAAAGAGAACTTCAAAAAGAA
AAGCAACCTGCAAAGCCAAGGAGGAAATTGGAGAGGTAGAAAAACCGCAT
CCGGTCTTGATGAGTGACGAATCTTTCCAAGGGGAATGCGAAGTTTCAAC
AAATCCCAAAGATATTGAGGAACACCGCCATGCGAATCAACCACCACCGT
ATCACTCACAAGATTTCCAACCAATGTCAACTAGCCACTTCAGCATTAAC
AGTCGCGAGAATTGGAATCATATATCTGGACATTGCAGCGATCTCAATCA
AGACTACGAAGAAGAGGAAACCAGTCCAAAAACCCACATACCCTTAGGTT
TTTCTGTCTCCATGGAGTTCGCAAACACGGCGCCTGCGCACTCCACGGAA
TCTCTGACCAGCACAGACATTTCTTCTGCTTCATGGCAGACATCTCCCTC
AAGCGTGGCATACAGGAAAAGAATCCAGGAACGACTAGCACAAGCTGTCA
CAAATGTACTGTCAAGGAGCGCAATGGAGCATCTTGTTGGAGGACTTGGA
AGGGAGTGGCAAGCGCTTGCTCAACGTTTGGGGCTTACAGAGGCGGAAAT
CGATCACATTTTAAACAAAAATAGAAGCGATTTGGACAAACAAATCTATG
AAATGATTAGGAAGTGGCAACAGGGTAAGACAGGACAAGCTTCCATCTCT
GAACTGTATGGAGCACTGCTGGAATGCAACATGGAAGAACTGCATAATAA
ATTAGTTTCTTTGGAAGGTCCTGCTGGTTGCCAAAACGAACCAATGAAAG
ATGTCTTGTAAATGTTAAGGCGACTGTTTTTTTGTCTACATCTGTTGGTC
ATCACCTTTTTCCAGGTATCGGCAAATATGGAATGGGATTGTAAGCTTTG
TGACCCAGGGTACTTCATGGTCAGCCCATGTGCCAACGGATTGCCAAATT
CTACAGTATGTGAAATGTGCAAGGGTAGATCATTTACACCAACGTATAAC
AATGAGACATCATGCATCAGGTGCCGTGAACCAAATCAAGTCGTTTACTC
TGACGAAGACACTCCCATCGCCTGTCGGTGTGCAAGGGGGTTCCATAAGA
AACATAGCACATGTGTACGGAATACGTTTTGTCGACCAGGAAAGGGGGTG
CACAGAGGAGGCTGCCTTGATTGCCTTGAAGGACAATTCAGCAACGCATA
TTCCAACACACAGCATTGTCGCCCTTGGACAAATTGTACCGCACGAGGAA
TGGTCACATTGTCCGATGGAACGTCAAGAAGGGATGCGATCTGCAAAGAT
ACAAGTGTGGCGAGAGGAAGACGTCGGCACAACAGAAAACGAACGGAAGG
CGAAAGAGAAATGGTAACCAATGCAACAAAGGTTCAAGCAAAGAACGCAG
AGAAAAGAATTCTGAGACAGAAAGGGTCATCATCAGCTTCGTCTATAGAA
CTGACTTCCACGAAAAACACAACAACAACAACATCAATGCCAATAACAAC
AAGTGATCAACTCATCTCACATGCGAAGCTTTTACCAACTGTGCCGGGAG
ATGATCCAAGTTACTGGTTTTTCATCGTCATAACCGCCAGTGTTATCACA
CTGCTACTGCTTGTTATTACTATGCTTATGTGCTTTTGTTATAGGGGACT
GATAAAGAGAACTTCAAAAAGAAAAGCAACCTGCAAAGCCAAGGAGGAAA
TTGGAGAGGTAGAAAAACCGCATCCGGTCTTGATGAGTGACGAATCTTTC
CAAGGGGAATGCGAAGTTTCAACAAATCCCAAAGATATTGAGGAACACCG
CCATGCGAATCAACCACCACCGTATCACTCACAAGATTTCCAACCAATGT
CAACTAGCCACTTCAGCATTAACAGTCGCGAGAATTGGAATCATATATCT
GGACATTGCAGCGATCTCAATCAAGACTACGAAGAAGAGGAAACCAGTCC
AAAAACCCACATACCCTTAGGTTTTTCTGTCTCCATGGAGTTCGCAAACA
CGGCGCCTGCGCACTCCACGGAATCTCTGACCAGCACAGACATTTCTTCT
GCTTCATGGCAGACATCTCCCTCAAGCGTGGCATACAGGAAAAGAATCCA
GGAACGACTAGCACAAGCTGTCACAAATGTACTGTCAAGGAGCGCAATGG
AGCATCTTGTTGGAGGACTTGGAAGGGAGTGGCAAGCGCTTGCTCAACGT
TTGGGGCTTACAGAGGCGGAAATCGATCACATTTTAAACAAAAATAGAAG
CGATTTGGACAAACAAATCTATGAAATGATTAGGAAGTGGCAACAGGGTA
AGACAGGACAAGCTTCCATCTCTGAACTGTATGGAGCACTGCTGGAATGC
AACATGGAAGAACTGCATAATAAATTAGTTTCTTTGGAAGGTCCTGCTGG
TTGCCAAAACGAACCAATGAAAGATGTCTTGTAAATGTTAAGGCGACTGT
TTTTTTGTCTACATCTGTTGGTCATCACCTTTTTCCAGGTATCGGCAAAT
ATGGAATGGGATTGTAAGCTTTGTGACCCAGGGTACTTCATGGTCAGCCC
ATGTGCCAACGGATTGCCAAATTCTACAGTATGTGAAATGTGCAAGGGTA
GATCATTTACACCAACGTATAACAATGAGACATCATGCATCAGGTGCCGT
GAACCAAATCAAGTCGTTTACTCTGACGAAGACACTCCCATCGCCTGTCG
GTGTGCAAGGGGGTTCCATAAGAAACATAGCACATGTGTACGGAATACGT
TTTGTCGACCAGGAAAGGGGGTGCACAGAGGAGGCTGCCTTGATTGCCTT
GAAGGACAATTCAGCAACGCATATTCCAACACACAGCATTGTCGCCCTTG
GACAAATTGTACCGCACGAGGAATGGTCACATTGTCCGATGGAACGTCAA
GAAGGGATGCGATCTGCAAAGATACAAGTGTGGCGAGAGGAAGACGTCGG
CACAACAGAAAACGAACGGAAGGCGAAAGAGAAATGGTAACCAATGCAAC
AAAGGTTCAAGCAAAGAACGCAGAGAAAAGAATTCTGAGACAGAAAGGGT
CATCATCAGCTTCGTCTATAGAACTGACTTCCACGAAAAACACAACAACA
ACAACATCAATGCCAATAACAACAAGTGATCAACTCATCTCACATGCGAA
GCTTTTACCAACTGTGCCGGGAGATGATCCAAGTTACTGGTTTTTCATCG
TCATAACCGCCAGTGTTATCACACTGCTACTGCTTGTTATTACTATGCTT
ATGTGCTTTTGTTATAGGGGACTGATAAAGAGAACTTCAAAAAGAAAAGC
AACCTGCAAAGCCAAGGAGGAAATTGGAGAGGTAGAAAAACCGCATCCGG
TCTTGATGAGTGACGAATCTTTCCAAGGGGAATGCGAAGTTTCAACAAAT
CCCAAAGATATTGAGGAACACCGCCATGCGAATCAACCACCACCGTATCA
CTCACAAGATTTCCAACCAATGTCAACTAGCCACTTCAGCATTAACAGTC
GCGAGAATTGGAATCATATATCTGGACATTGCAGCGATCTCAATCAAGAC
TACGAAGAAGAGGAAACCAGTCCAAAAACCCACATACCCTTAGGTTTTTC
TGTCTCCATGGAGTTCGCAAACACGGCGCCTGCGCACTCCACGGAATCTC
TGACCAGCACAGACATTTCTTCTGCTTCATGGCAGACATCTCCCTCAAGC
GTGGCATACAGGAAAAGAATCCAGGAACGACTAGCACAAGCTGTCACAAA
TGTACTGTCAAGGAGCGCAATGGAGCATCTTGTTGGAGGACTTGGAAGGG
AGTGGCAAGCGCTTGCTCAACGTTTGGGGCTTACAGAGGCGGAAATCGAT
CACATTTTAAACAAAAATAGAAGCGATTTGGACAAACAAATCTATGAAAT
GATTAGGAAGTGGCAACAGGGTAAGACAGGACAAGCTTCCATCTCTGAAC
TGTATGGAGCACTGCTGGAATGCAACATGGAAGAACTGCATAATAAATTA
GTTTCTTTGGAAGGTCCTGCTGGTTGCCAAAACGAACCAATGAAAGATGT
CTTGTAAATGTTAAGGCGACTGTTTTTTTGTCTACATCTGTTGGTCATCA
CCTTTTTCCAGGTATCGGCAAATATGGAATGGGATTGTAAGCTTTGTGAC
CCAGGGTACTTCATGGTCAGCCCATGTGCCAACGGATTGCCAAATTCTAC
AGTATGTGAAATGTGCAAGGGTAGATCATTTACACCAACGTATAACAATG
AGACATCATGCATCAGGTGCCGTGAACCAAATCAAGTCGTTTACTCTGAC
GAAGACACTCCCATCGCCTGTCGGTGTGCAAGGGGGTTCCATAAGAAACA
TAGCACATGTGTACGGAATACGTTTTGTCGACCAGGAAAGGGGGTGCACA
GAGGAGGCTGCCTTGATTGCCTTGAAGGACAATTCAGCAACGCATATTCC
AACACACAGCATTGTCGCCCTTGGACAAATTGTACCGCACGAGGAATGGT
CACATTGTCCGATGGAACGTCAAGAAGGGATGCGATCTGCAAAGATACAA
GTGTGGCGAGAGGAAGACGTCGGCACAACAGAAAACGAACGGAAGGCGAA
AGAGAAATGGTAACCAATGCAACAAAGGTTCAAGCAAAGAACGCAGAGAA
AAGAATTCTGAGACAGAAAGGGTCATCATCAGCTTCGTCTATAGAACTGA
CTTCCACGAAAAACACAACAACAACAACATCAATGCCAATAACAACAAGT
GATCAACTCATCTCACATGCGAAGCTTTTACCAACTGTGCCGGGAGATGA
TCCAAGTTACTGGTTTTTCATCGTCATAACCGCCAGTGTTATCACACTGC
TACTGCTTGTTATTACTATGCTTATGTGCTTTTGTTATAGGGGACTGATA
AAGAGAACTTCAAAAAGAAAAGCAACCTGCAAAGCCAAGGAGGAAATTGG
AGAGGTAGAAAAACCGCATCCGGTCTTGATGAGTGACGAATCTTTCCAAG
GGGAATGCGAAGTTTCAACAAATCCCAAAGATATTGAGGAACACCGCCAT
GCGAATCAACCACCACCGTATCACTCACAAGATTTCCAACCAATGTCAAC
TAGCCACTTCAGCATTAACAGTCGCGAGAATTGGAATCATATATCTGGAC
ATTGCAGCGATCTCAATCAAGACTACGAAGAAGAGGAAACCAGTCCAAAA
ACCCACATACCCTTAGGTTTTTCTGTCTCCATGGAGTTCGCAAACACGGC
GCCTGCGCACTCCACGGAATCTCTGACCAGCACAGACATTTCTTCTGCTT
CATGGCAGACATCTCCCTCAAGCGTGGCATACAGGAAAAGAATCCAGGAA
CGACTAGCACAAGCTGTCACAAATGTACTGTCAAGGAGCGCAATGGAGCA
TCTTGTTGGAGGACTTGGAAGGGAGTGGCAAGCGCTTGCTCAACGTTTGG
GGCTTACAGAGGCGGAAATCGATCACATTTTAAACAAAAATAGAAGCGAT
TTGGACAAACAAATCTATGAAATGATTAGGAAGTGGCAACAGGGTAAGAC
AGGACAAGCTTCCATCTCTGAACTGTATGGAGCACTGCTGGAATGCAACA
TGGAAGAACTGCATAATAAATTAGTTTCTTTGGAAGGTCCTGCTGGTTGC
CAAAACGAACCAATGAAAGATGTCTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL70658gene:BL70658Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL70658_cuf2transcript:BL70658_cuf2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL70658_cuf2-E1BL70658_cuf2-E1-1564476830-147606Branchiostoma lanceolatumexon
BL70658_cuf2-E2BL70658_cuf2-E2-1564476830-147603Branchiostoma lanceolatumexon
BL70658_cuf2-E3BL70658_cuf2-E3-1564476830-147601Branchiostoma lanceolatumexon
BL70658_cuf2-E4BL70658_cuf2-E4-1564476830-147599Branchiostoma lanceolatumexon
BL70658_cuf2-E5BL70658_cuf2-E5-1564476830-147597Branchiostoma lanceolatumexon
BL70658_cuf2-E6BL70658_cuf2-E6-1564476830-147595Branchiostoma lanceolatumexon
BL70658_cuf2-E7BL70658_cuf2-E7-1564476830-147593Branchiostoma lanceolatumexon
BL70658_cuf2-E8BL70658_cuf2-E8-1564476830-147591Branchiostoma lanceolatumexon
BL70658_cuf2-E9BL70658_cuf2-E9-1564476830-147589Branchiostoma lanceolatumexon
BL70658_cuf2-E10BL70658_cuf2-E10-1564476830-147587Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000021genomeSc0000021:1734630..1739529 -
Properties
Property NameValue
Transcript idBL70658_cuf2
Biotypeprotein_coding