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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95360_evm2 >transcript:BL95360_evm2-protein ID=transcript:BL95360_evm2-protein|Name=transcript:BL95360_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=466bp
MEETSSSDGEGSCSSTSASEHSGSDMQGDSNSTENVTPPVTETTVPNHGN
FQDEEADKEEDCDESRASEEAESLTVTSDKSNKVGQPIPSKLYGCKECSY
DALTRYELKMHVVQKHTKQFPFVCQECSYGCVNRKDLLSHQRVHSKEKPF
LCIKCDFRSNFRSGLNRHMADHHFGGRIFTCGVCGHRASFTILAKHMLTH
VVEGNKDGVFECKHCNFTSTKKSELEEHFKKDIGHSGPTCPPEKQFICER
CGFQTVKRGYLTRHIWYVHKDVGHKEQQKREGEDKSFLCETCGFTATLKV
GLVLHKRTHTGEKPYMCDQCGYKCARHGTLKRHMYKHTGGHPHVCELCGY
KTAKKLDLTNHMRKHTGEKPFKCDQCDFAATFKSSIRQHKVKHTGDKSYA
CDKCSYRTGYKGNLAIHMKVHTGVKPFKCSHCNYAAAHKGSLVHHISAHH
SQKKDTKIHPWKMKYL Run BLAST on NCBI mRNA from alignment at Sc0000028:2016571..2019420+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95360_evm2 ID=transcript:BL95360_evm2|Name=transcript:BL95360_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2850bp|location=Sequence derived from alignment at Sc0000028:2016571..2019420+ (Branchiostoma lanceolatum)
CTTTGTGGAGCTCTGCAGTTTTTCTGAAAACCTGTGATCCGACCAGGTGA
GAGCGCGATTTGGACACATTTCGTGAACATTTGTTTCGATTTATATCAGC
AAAACCCACTCAAATGGTGCATTGTATCATGTTTTATCTAGCATGTTTCA
TTGTCCGTGTATCGTACTATGTGAACGCCACAGCTAGCATGACAATGTAC
GGTAGGGGAGGGGGGCTTTTGTCATTGGTGAAAATTTATTTACGCATGGC
ACGTTACATGTGTTTGCATACTTTTAGTAATTTGTACTACTAATTTGTAC
TACTTTCAAATTCTTGGCAAGTGTTACGAAGCAAAGTAAAGCAAAGAATA
CCATCTACTTTGACGGGAAACCATCTAATATTGGTTTCTTTATTTATTTA
TTTATTTGTTTACAGAGGAAAATATCATGGAGGAAACCAGCAGCAGCGAT
GGTGAGGGCTCCTGTTCCAGTACTAGTGCTTCTGAACACAGCGGCTCGGA
CATGCAGGGAGACTCCAACAGCACAGAGAATGTAACCCCGCCAGTCACAG
AGACAACTGTACCAAACCACGGGAACTTTCAGGATGAAGAGGTACTCATT
TAGGCTGTTAAAAAAAAAAATTGAAGAGGTCCAAAATCATACCGAGTTCC
AAATATTATCCAGATTTTTTTTCTAACTTACAAGTGGAGAGAAGACAAAA
AGAGGAAACAGACACGCATACCTACAAGAGATTACATTTTGTAAAAAGTC
CTAAATTTCTCTTTATAGTATTAGTTTGATGGTCAAACCCCAGGTACTTT
GCCCCTGATGGGGCTAATCAATCAGTCAATCAATATCCTTTATTTAGACT
GGAAAAATGCTCAGAGCCTTAGCCGTTCTTCCCAGAGGTCCAGTTTGTAA
TGTTGATGATGATGATATAACATGCCGAAATTTAGAATCATTTTTCATTG
TATTCCAGAGGCACAGAGATGTATAAATATTATCATAATGTATAACATGT
ACAATGTTGGATATCCTTTACAGTTTCTCTCATTTCTGGAGCATATAGTT
GCAGCAGGTGTGTTTTAATCATTTTACGACACTCTTGTTTTTAATGACTT
AATTATTATTTACAGGCAGACAAAGAGGAAGACTGTGATGAAAGCAGAGC
AAGTGAGGAAGCAGAGTCACTTACTGTTACATCAGACAAGTCCAACAAGG
TTGGACAACCAATACCTTCAAAACTATACGGATGCAAAGAGTGTAGTTAT
GATGCACTAACCCGGTATGAACTGAAGATGCACGTAGTACAGAAACACAC
AAAACAATTCCCTTTTGTCTGCCAGGAATGCAGCTATGGCTGCGTCAACA
GGAAGGATTTACTGAGCCACCAGAGGGTTCACTCGAAAGAGAAGCCCTTT
CTGTGCATTAAGTGTGACTTTCGCTCTAATTTTAGGAGCGGTTTGAATAG
ACACATGGCCGATCATCATTTTGGTGGGCGGATTTTTACCTGTGGGGTTT
GTGGCCACCGTGCGTCGTTCACTATCTTGGCTAAACACATGCTGACTCAT
GTTGTAGAGGGGAATAAGGATGGTGTGTTTGAATGCAAACATTGTAACTT
TACATCAACTAAAAAGAGTGAGCTCGAAGAGCACTTCAAAAAGGATATAG
GGCATAGCGGACCTACATGTCCGCCCGAGAAACAATTTATCTGTGAGCGT
TGTGGGTTCCAAACTGTCAAGAGAGGCTACCTTACCAGACACATATGGTA
TGTTCACAAGGACGTCGGGCACAAAGAGCAACAAAAACGGGAGGGAGAAG
ACAAATCGTTCCTTTGTGAGACATGTGGTTTCACAGCAACACTGAAGGTA
GGCCTGGTGCTCCACAAAAGAACTCACACCGGTGAGAAGCCCTACATGTG
TGACCAGTGCGGGTACAAGTGCGCCCGCCACGGCACTCTCAAACGACACA
TGTACAAACACACCGGGGGCCACCCCCACGTCTGCGAACTCTGCGGATAC
AAAACCGCAAAAAAGCTCGACCTGACCAACCACATGAGAAAGCACACAGG
CGAGAAGCCTTTCAAATGTGACCAGTGTGATTTCGCAGCTACCTTCAAGT
CGAGCATCAGGCAACACAAGGTAAAACACACTGGTGACAAGTCGTATGCC
TGCGACAAGTGTTCCTACAGAACAGGCTATAAGGGAAACCTGGCTATCCA
TATGAAGGTGCACACTGGGGTCAAGCCTTTCAAGTGTAGTCACTGCAACT
ATGCAGCAGCTCACAAGGGGAGCCTAGTACACCACATTTCTGCACACCAT
TCTCAGAAGAAAGACACAAATTCAAATTCTTCCATGGAAAATGAAGGAAT
TAAAAGCTCTTTGACCACAAGCTTGGAAGCTACAGGACCTGAAGATAGTG
ATTGTTACAGTCAATATTGTACCAGCTTCCAACCTTTGAATTAATAACTG
AAATGTCGAATGAGAAAGACACGAATTCATCCACGGAAAATGAAGGAGCT
AGAAGCTCTTTGACCACGAATTTGTTGGAACGTACCAAAGGAGATGAAGA
GAGTGATTGGTATAGTCAATATTATGCCGGCTTCCAACCTTTGAATCAAT
AACTTAAATGTCAAGTGAGAAAGACATAATTCATCCATGGAAAATAAAGG
AGCTAGAAGCTCTTTGACCACAAATTATAGGTATTGGAATGTACAGAAGG
AAATGAGGAGAGTGATTGGTACAGTCAATGTTATGCCCAGCTTCCAACCT
TTGAATTTATAACTGAAAGGTCGAATGAGAAAGACACAAATTCATCCATG
GAAAATGAAGTACCTATAAGCTCTTTGACAACAAATGTGTTGGAAGCTAC
Coding sequence (CDS) from alignment at Sc0000028:2016571..2019420+ >transcript:BL95360_evm2 ID=transcript:BL95360_evm2|Name=transcript:BL95360_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4203bp|location=Sequence derived from alignment at Sc0000028:2016571..2019420+ (Branchiostoma lanceolatum)
ATGGAGGAAACCAGCAGCAGCGATGGTGAGGGCTCCTGTTCCAGTACTAG
TGCTTCTGAACACAGCGGCTCGGACATGCAGGGAGACTCCAACAGCACAG
AGAATGTAACCCCGCCAGTCACAGAGACAACTGTACCAAACCACGGGAAC
TTTCAGGATGAAGAGGCAGACAAAGAGGAAGACTGTGATGAAAGCAGAGC
AAGTGAGGAAGCAGAGTCACTTACTGTTACATCAGACAAGTCCAACAAGG
TTGGACAACCAATACCTTCAAAACTATACGGATGCAAAGAGTGTAGTTAT
GATGCACTAACCCGGTATGAACTGAAGATGCACGTAGTACAGAAACACAC
AAAACAATTCCCTTTTGTCTGCCAGGAATGCAGCTATGGCTGCGTCAACA
GGAAGGATTTACTGAGCCACCAGAGGGTTCACTCGAAAGAGAAGCCCTTT
CTGTGCATTAAGTGTGACTTTCGCTCTAATTTTAGGAGCGGTTTGAATAG
ACACATGGCCGATCATCATTTTGGTGGGCGGATTTTTACCTGTGGGGTTT
GTGGCCACCGTGCGTCGTTCACTATCTTGGCTAAACACATGCTGACTCAT
GTTGTAGAGGGGAATAAGGATGGTGTGTTTGAATGCAAACATTGTAACTT
TACATCAACTAAAAAGAGTGAGCTCGAAGAGCACTTCAAAAAGGATATAG
GGCATAGCGGACCTACATGTCCGCCCGAGAAACAATTTATCTGTGAGCGT
TGTGGGTTCCAAACTGTCAAGAGAGGCTACCTTACCAGACACATATGGTA
TGTTCACAAGGACGTCGGGCACAAAGAGCAACAAAAACGGGAGGGAGAAG
ACAAATCGTTCCTTTGTGAGACATGTGGTTTCACAGCAACACTGAAGGTA
GGCCTGGTGCTCCACAAAAGAACTCACACCGGTGAGAAGCCCTACATGTG
TGACCAGTGCGGGTACAAGTGCGCCCGCCACGGCACTCTCAAACGACACA
TGTACAAACACACCGGGGGCCACCCCCACGTCTGCGAACTCTGCGGATAC
AAAACCGCAAAAAAGCTCGACCTGACCAACCACATGAGAAAGCACACAGG
CGAGAAGCCTTTCAAATGTGACCAGTGTGATTTCGCAGCTACCTTCAAGT
CGAGCATCAGGCAACACAAGGTAAAACACACTGGTGACAAGTCGTATGCC
TGCGACAAGTGTTCCTACAGAACAGGCTATAAGGGAAACCTGGCTATCCA
TATGAAGGTGCACACTGGGGTCAAGCCTTTCAAGTGTAGTCACTGCAACT
ATGCAGCAGCTCACAAGGGGAGCCTAGTACACCACATTTCTGCACACCAT
TCTCAGAAGAAAGACACAAAAATTCATCCATGGAAAATGAAGTACCTATA
AATGGAGGAAACCAGCAGCAGCGATGGTGAGGGCTCCTGTTCCAGTACTA
GTGCTTCTGAACACAGCGGCTCGGACATGCAGGGAGACTCCAACAGCACA
GAGAATGTAACCCCGCCAGTCACAGAGACAACTGTACCAAACCACGGGAA
CTTTCAGGATGAAGAGGCAGACAAAGAGGAAGACTGTGATGAAAGCAGAG
CAAGTGAGGAAGCAGAGTCACTTACTGTTACATCAGACAAGTCCAACAAG
GTTGGACAACCAATACCTTCAAAACTATACGGATGCAAAGAGTGTAGTTA
TGATGCACTAACCCGGTATGAACTGAAGATGCACGTAGTACAGAAACACA
CAAAACAATTCCCTTTTGTCTGCCAGGAATGCAGCTATGGCTGCGTCAAC
AGGAAGGATTTACTGAGCCACCAGAGGGTTCACTCGAAAGAGAAGCCCTT
TCTGTGCATTAAGTGTGACTTTCGCTCTAATTTTAGGAGCGGTTTGAATA
GACACATGGCCGATCATCATTTTGGTGGGCGGATTTTTACCTGTGGGGTT
TGTGGCCACCGTGCGTCGTTCACTATCTTGGCTAAACACATGCTGACTCA
TGTTGTAGAGGGGAATAAGGATGGTGTGTTTGAATGCAAACATTGTAACT
TTACATCAACTAAAAAGAGTGAGCTCGAAGAGCACTTCAAAAAGGATATA
GGGCATAGCGGACCTACATGTCCGCCCGAGAAACAATTTATCTGTGAGCG
TTGTGGGTTCCAAACTGTCAAGAGAGGCTACCTTACCAGACACATATGGT
ATGTTCACAAGGACGTCGGGCACAAAGAGCAACAAAAACGGGAGGGAGAA
GACAAATCGTTCCTTTGTGAGACATGTGGTTTCACAGCAACACTGAAGGT
AGGCCTGGTGCTCCACAAAAGAACTCACACCGGTGAGAAGCCCTACATGT
GTGACCAGTGCGGGTACAAGTGCGCCCGCCACGGCACTCTCAAACGACAC
ATGTACAAACACACCGGGGGCCACCCCCACGTCTGCGAACTCTGCGGATA
CAAAACCGCAAAAAAGCTCGACCTGACCAACCACATGAGAAAGCACACAG
GCGAGAAGCCTTTCAAATGTGACCAGTGTGATTTCGCAGCTACCTTCAAG
TCGAGCATCAGGCAACACAAGGTAAAACACACTGGTGACAAGTCGTATGC
CTGCGACAAGTGTTCCTACAGAACAGGCTATAAGGGAAACCTGGCTATCC
ATATGAAGGTGCACACTGGGGTCAAGCCTTTCAAGTGTAGTCACTGCAAC
TATGCAGCAGCTCACAAGGGGAGCCTAGTACACCACATTTCTGCACACCA
TTCTCAGAAGAAAGACACAAAAATTCATCCATGGAAAATGAAGTACCTAT
AAATGGAGGAAACCAGCAGCAGCGATGGTGAGGGCTCCTGTTCCAGTACT
AGTGCTTCTGAACACAGCGGCTCGGACATGCAGGGAGACTCCAACAGCAC
AGAGAATGTAACCCCGCCAGTCACAGAGACAACTGTACCAAACCACGGGA
ACTTTCAGGATGAAGAGGCAGACAAAGAGGAAGACTGTGATGAAAGCAGA
GCAAGTGAGGAAGCAGAGTCACTTACTGTTACATCAGACAAGTCCAACAA
GGTTGGACAACCAATACCTTCAAAACTATACGGATGCAAAGAGTGTAGTT
ATGATGCACTAACCCGGTATGAACTGAAGATGCACGTAGTACAGAAACAC
ACAAAACAATTCCCTTTTGTCTGCCAGGAATGCAGCTATGGCTGCGTCAA
CAGGAAGGATTTACTGAGCCACCAGAGGGTTCACTCGAAAGAGAAGCCCT
TTCTGTGCATTAAGTGTGACTTTCGCTCTAATTTTAGGAGCGGTTTGAAT
AGACACATGGCCGATCATCATTTTGGTGGGCGGATTTTTACCTGTGGGGT
TTGTGGCCACCGTGCGTCGTTCACTATCTTGGCTAAACACATGCTGACTC
ATGTTGTAGAGGGGAATAAGGATGGTGTGTTTGAATGCAAACATTGTAAC
TTTACATCAACTAAAAAGAGTGAGCTCGAAGAGCACTTCAAAAAGGATAT
AGGGCATAGCGGACCTACATGTCCGCCCGAGAAACAATTTATCTGTGAGC
GTTGTGGGTTCCAAACTGTCAAGAGAGGCTACCTTACCAGACACATATGG
TATGTTCACAAGGACGTCGGGCACAAAGAGCAACAAAAACGGGAGGGAGA
AGACAAATCGTTCCTTTGTGAGACATGTGGTTTCACAGCAACACTGAAGG
TAGGCCTGGTGCTCCACAAAAGAACTCACACCGGTGAGAAGCCCTACATG
TGTGACCAGTGCGGGTACAAGTGCGCCCGCCACGGCACTCTCAAACGACA
CATGTACAAACACACCGGGGGCCACCCCCACGTCTGCGAACTCTGCGGAT
ACAAAACCGCAAAAAAGCTCGACCTGACCAACCACATGAGAAAGCACACA
GGCGAGAAGCCTTTCAAATGTGACCAGTGTGATTTCGCAGCTACCTTCAA
GTCGAGCATCAGGCAACACAAGGTAAAACACACTGGTGACAAGTCGTATG
CCTGCGACAAGTGTTCCTACAGAACAGGCTATAAGGGAAACCTGGCTATC
CATATGAAGGTGCACACTGGGGTCAAGCCTTTCAAGTGTAGTCACTGCAA
CTATGCAGCAGCTCACAAGGGGAGCCTAGTACACCACATTTCTGCACACC
ATTCTCAGAAGAAAGACACAAAAATTCATCCATGGAAAATGAAGTACCTA
TAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000028 | genome | Sc0000028:2016571..2019420 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95360_evm2 |
| Biotype | protein_coding |
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