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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76174_cuf0 >transcript:BL76174_cuf0-protein ID=transcript:BL76174_cuf0-protein|Name=transcript:BL76174_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=235bp
MSALLFNIAIDWVLKQTTKDQNRGIRWTLFSVLEDLDYADDLALLTHTHR
YMQEKTSRLGDFGRTIGLKISQKKTEVMTLNIPNPSQIQANGENLPHTEI
FTYLGSTVSYDGGADKDIKNRLNKARNAFHILNNIWRSQQYSTKTKLKLY
QSCVLSTLLYGSECWRMTKKNLQKLPTFHTKSLRRILRISWPKTLSNEEL
LNKCKQECMETIILRRRWKWIGHVLRKDQNDIARV Run BLAST on NCBI mRNA from alignment at Sc0000046:1468196..1471397- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76174_cuf0 ID=transcript:BL76174_cuf0|Name=transcript:BL76174_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3202bp|location=Sequence derived from alignment at Sc0000046:1468196..1471397- (Branchiostoma lanceolatum)
GGGGTCTCAGGGTTGACAACCCAGTCCCATAAAGAATACGTTGTCACGGA
AACAGCAACAAAAGAATCGAAAACAACCGGACGTGACGGGCTTCCAGGTG
TATCAGCAGATACCAGGATGAATGCCAGTGGTGAAAGCCCTCGGGAAGCC
ACCGACAGGAAGGTGGAAGTTCTTCATGCCAAACAAAAAACAAATATAGG
TTTTTGGAATGTGCGTACCATGTATGAAACAGGAAAACTTGCACAAGTAA
CGACTGAAATGAGAAGATACAATTTACATATATTAGGAATCAGTGAGAGC
AGATGGACAGGATCAGGGCGACTCAGAACCAGCACAGGTGAAACAGTTCT
GTACTCAGGCAGAGATGACGGCCGCCACCATGAAGGTGTAGCCATTATTC
TACAAAAGGGAGTATAGAAAAGCCTGATAGAGTGGAAACCGGTTAATAGC
AGGCTCATCAAGATCAGACTGAAAGGGAAACAGATCAACACTACTATTAT
ACAATGTTATGCACCGACAAATGATAGTGATGAAGAAAGTAAAGATGCGT
TTTATGAGCAGTTACAAGCTGAGCTTAAGAGTATACCAGGTCACGATATG
AAGATAGTGATGGGAGATATGAATGCAAAAGTTGGAAATGACAACTCTGG
ATATGATAGGGCCATGGGAAGGCAAAGTTGTNTATGATAGGGCCATGGGA
AGGCAAGGTTGTGGAGTTATGAATGAAAACGGAGAAAGACTGGTGGATTT
CTGTGCCAGCCATGACCTTGTAATAGGTGGTACACTATTCCCACATAAGG
ATATACACAAGCTGACCTGGTTTTCACCAAATGGTAGAGACATGAATCAG
ATAGATCACCTCATGATCAATGGGACCTGGAGACGCTCACTGTTCGACGT
CAAGGTTAAACGAGGTGCAGATGTTTCCAGTGATCATCATCTTGTTGTGG
CAATACTGAAAGTGAAATTAAGGAAAGCTGGAAGCAGAAAGGCAAAGAAA
GAGCATTTTGACATTGAAAAGCTTCAAGACCCTAAAGTGAGGAGCTCCTT
TACTCTGCAACTAAAGAATAGATTCCAGGTGCTATCCACCCTTAGTGAAA
CACAACAGGATGCAAATACAAATGCAAATGAGATTAACGACAAATGGGAA
CAGGCAAAAACTGCTTATGTGGAAACTAGCAGAAAGTGTTTGGGCACCAA
AAGGAAGGACAGGAAAGAGTGGATAACCAATGAAACATGGCAAGCCATTG
AAACACGTAGGAGGGTTAAAAAGAAACTAATGGAAGCAAAATCAGGTAGA
TTGAAAGGGAAGTACAAAGCGGAATATTAAAAAGCAAAGAAAGATGTCAA
NAAAGCAAATAAAGATGTCAAGAGGAAGACTCGAACTGACAAAAGGGCAT
ACATAGACAATCTTGCAAAACAAGCAGAAGATGCAGCACAAAAAGGAGAG
CAGGGTAAAGTGTACAAGCTAACCAGGATGATTAGTGGCAAATACAAAGG
AGCATCTGACTTGCCAGTGGAAGATAAGCAAGGAAAGCTTCTCACAACAG
AAGCAGACCAAGAAGCCAGGTGGGCTGAGCACTTCAATGAGGTCCTCAAC
AGACCTCCGCCAACAGTACCAGCTAACTTCCAAGACACAGAAGTAATCCC
GCCCCTGAATGTCAGCACTGAACCACCTACCAAAAGCGAAATAATAATGG
CTATTAAATCACTAAAGAACAAGAAAGCCCCTGGATCAGATAATCTTAAT
GCAAAACTGTTCAAGGCAGATCCAAGTCTAGCAGCTGAAATTCTTCTGCC
ACTCTTCACCTTAGTATGGAATAATAAGGAAATACCCGATGACTGGTCAG
AAGGAATCATCATCAAACTCCCTAAGCGTGGTTCCTTACGAAACTGTAAT
AACTGGAGAGGGATCACACTCTTGTCAATACCAAGCAAAATTCCATCAAA
GATAATTGTCAATCGTATAACGGAGGCTGTTGACAAGCACCTCAGGAAAG
AACAGGCTGGTTTCAGAAGAGGAAAAGGGTGCATCGACCATATTTTCACT
CTACGTAACATTATTGAGCAGTGCACAGAGTGGCAAAGAGAACTGTATGT
GAACTTTGTCGATTTTGAAAAGGCTTTTGATTCCATTCACTGTGAAAGTC
TCTGGGATATTCTGCTTCTGTAAGGAATACCTGAATAAATAGTTCTTGTC
ATCAGAAGTTTTTACAACAACTTCATATGCAGAGTTGGAAATAGCTTACA
AACTTTCCATGTAAAATCAGGTGTTAGACAAGGTTGTGTGATGTCAGCAT
TACTATTCAACATTGCAATTGACTGGGTCCTGAAACAAACAACTAAAGAT
CAGAATAGAGGCATTAGATGGACACTCTTTTCAGTTCTGGAAGACTTGGA
TTACGCGGACGATCTTGCACTGCTCACGCATACCCATCGCTACATGCAGG
AGAAAACATCCCGTCTTGGTGACTTTGGTCGAACAATTGGATTGAAGATA
AGCCAAAAGAAAACTGAGGTCATGACCCTGAATATCCCAAATCCTTCCCA
AATTCAGGCTAACGGTGAAAATCTGCCCCATACTGAGATCTTTACATACC
TAGGTAGCACTGTTAGTTATGATGGAGGTGCAGATAAAGACATCAAAAAC
CGTCTTAACAAAGCAAGAAATGCATTTCACATATTGAATAACATATGGAG
GTCACAACAGTATTCTACAAAAACAAAACTTAAACTTTACCAAAGTTGTG
TCCTGTCAACCCTACTATATGGCTCAGAATGTTGGAGGATGACAAAGAAA
AATCTGCAAAAACTGCCAACCTTTCACACCAAAAGCTTGAGAAGAATTCT
TCGCATCTCCTGGCCAAAGACTCTTTCAAATGAGGAACTCTTAAACAAAT
GTAAACAAGAGTGCATGGAAACAATCATCCTCCGAAGGAGATGGAAATGG
ATAGGGCACGTGTTGAGGAAAGATCAAAACGACATAGCAAGAGTATAGAT
GAATTGGACCCCGGAAGGGAGGAGAAAACAAGGCAGACCAAAAAACACAT
GGCGAAGAACAGTAGCAGGAGAACTGAAGTGCTTTGGCCACACCTGGAAC
AGCATCCAGAGCCTTGCCCAGGACAGACGGAACTGGCGAACTTTTGTTGC
TGCCCTACATGCCGGGAGGCATAAAGGGCAGTAAGTAAGTAAGTAATGCG
TA Coding sequence (CDS) from alignment at Sc0000046:1468196..1471397- >transcript:BL76174_cuf0 ID=transcript:BL76174_cuf0|Name=transcript:BL76174_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=708bp|location=Sequence derived from alignment at Sc0000046:1468196..1471397- (Branchiostoma lanceolatum)
ATGTCAGCATTACTATTCAACATTGCAATTGACTGGGTCCTGAAACAAAC
AACTAAAGATCAGAATAGAGGCATTAGATGGACACTCTTTTCAGTTCTGG
AAGACTTGGATTACGCGGACGATCTTGCACTGCTCACGCATACCCATCGC
TACATGCAGGAGAAAACATCCCGTCTTGGTGACTTTGGTCGAACAATTGG
ATTGAAGATAAGCCAAAAGAAAACTGAGGTCATGACCCTGAATATCCCAA
ATCCTTCCCAAATTCAGGCTAACGGTGAAAATCTGCCCCATACTGAGATC
TTTACATACCTAGGTAGCACTGTTAGTTATGATGGAGGTGCAGATAAAGA
CATCAAAAACCGTCTTAACAAAGCAAGAAATGCATTTCACATATTGAATA
ACATATGGAGGTCACAACAGTATTCTACAAAAACAAAACTTAAACTTTAC
CAAAGTTGTGTCCTGTCAACCCTACTATATGGCTCAGAATGTTGGAGGAT
GACAAAGAAAAATCTGCAAAAACTGCCAACCTTTCACACCAAAAGCTTGA
GAAGAATTCTTCGCATCTCCTGGCCAAAGACTCTTTCAAATGAGGAACTC
TTAAACAAATGTAAACAAGAGTGCATGGAAACAATCATCCTCCGAAGGAG
ATGGAAATGGATAGGGCACGTGTTGAGGAAAGATCAAAACGACATAGCAA
GAGTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000046 | genome | Sc0000046:1468196..1471397 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76174_cuf0 |
| Biotype | protein_coding |
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