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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95112_evm2 >transcript:BL95112_evm2-protein ID=transcript:BL95112_evm2-protein|Name=transcript:BL95112_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=238bp
MVGSSPGGGLSNVLTFFLDADLPLSMTMTFVSTVLALGMMPLSLFIYGRA
FQLDSINVPFLNIIISLVSITIPELLGILLRHKKPRIADKVMKVIRLVSA
LFIIALVVIGVMVNTHVIYTPWQPIVACFLLPLAGFIIGFGLAKMFCLDN
NRARTVSIETGVQNGTLASAMIRLSFPQPEADLSFSLSFLNGMFQVGLSL
LAVAVYNIYKCKNPTTEEVKMTDLEGKENSVVISDVKE Run BLAST on NCBI mRNA from alignment at Sc0000005:1139646..1141296- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95112_evm2 ID=transcript:BL95112_evm2|Name=transcript:BL95112_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1651bp|location=Sequence derived from alignment at Sc0000005:1139646..1141296- (Branchiostoma lanceolatum)
ATGGTTGGAAGCTCCCCGGGAGGCGGACTGAGTAACGTCCTGACGTTCTT
TCTGGACGCTGACCTTCCCCTCAGCATGACCATGACCTTCGTGTCAACCG
TCCTGGCTCTGGGGATGATGCCGCTCTCACTCTTCATCTATGGACGGGCG
GTGAGTTCACATTCTCCTACGCAGGGCCTCGCCCGCAGCCTATACAAGAT
ACCTTAGGGAGGCTGTGCTAATCTGAGCTAAGATTTCCTCTTTTGTGGGT
GTGGCCTCTAACTAACTGTCAGCCAGTCAGAGAATCGCCTAATTGTTTTC
TTTGAGTAATGCCGATTCCCTGATCCACAAGGTATATTGTATAGGCCGCG
GGTGATTCTCTGCATAGGAGAATGTCAGTACGGTGCATGAAGCGAACACT
GTCTACCGTAGTCACGGTTGTGACGTAGTCATGGTTGATTACTAGCTAGA
TGTTTGGGGTATTTACTGACGAAGACGTGTTTTTTACCCTTTCAATNACT
GACGAAGACGTGTTTTTTACCATTTCAATGACAGTTAGATGTCTTGGATA
ATTATTGACGAAGGGTAACTGGTTGTTTCGCTACATGATCAGTTCGCTAC
AGTCGTTTCGCAACATGGCAGAAGTTGTTTCGCTACATGGTACAAGTTGT
TTCGCTAAATGACAGAAGTCGTTTCGCTACGTTTGAATGTTGTGCCATGT
AGCGAAACAACCTGCCATGTAGCGAAACAACCTGTCATGTAGCAAAATGT
ACTGTAGCGAACTGGCAATGTAGCGAAACAACCTGTAACCACTTCTTTTT
GTATGTTCTAGTTCCAGCTTGATAGCATCAACGTGCCCTTCTTGAACATC
ATCATCTCCCTCGTCTCCATCACCATCCCCGAGCTGCTGGGAATTCTCCT
GCGGCACAAGAAGCCGCGCATCGCTGACAAGGTCATGAAGGTGATCCGGC
TCGTCAGCGCGCTCTTCATCATCGCGCTGGTGGTGATTGGTGTCATGGTC
AACACTCACGTCATCTACACGCCTTGGCAGCCCATCGTGGCATGCTTTCT
GTTGCCGCTGGCTGGATTCATCATCGGTGAGTTCGCCGTCTGGCGCTAGA
CACAGGGTTAAGGGAAAATGTCTTAGAAAAACAACGTTTATCACTATAAA
AATACTCTGTCCTGCCACTTGCTACATATTGTAATCAAACACCACAGGGT
ATCTGCTACTTTACCCGTAACCATAGTGACAGCCGCCTGGTTCATGTCAT
TGAACTTATTTGCTTGGAACGGAAGAAGAAATGGGGCAGGTAAATATTAC
ACGCATTGACGGATCAATCGCCTTACCGATTTCTTTTCTTCTCTTGCAGG
CTTTGGGCTGGCAAAGATGTTCTGCCTCGACAACAACAGAGCCAGAACCG
TCTCCATAGAAACCGGGGTGCAGAACGGAACGCTGGCTTCCGCCATGATC
AGACTCTCGTTCCCACAGCCGGAAGCAGACCTCTCGTTCTCACTGTCTTT
TCTGAACGGCATGTTCCAGGTTGGCCTTTCGCTGCTGGCAGTTGCAGTGT
ATAATATCTACAAGTGTAAAAATCCCACCACCGAAGAAGTAAAGATGACT
GATCTTGAGGGAAAAGAGAATTCCGTTGTGATATCTGATGTCAAAGAGTA
A Coding sequence (CDS) from alignment at Sc0000005:1139646..1141296- >transcript:BL95112_evm2 ID=transcript:BL95112_evm2|Name=transcript:BL95112_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2151bp|location=Sequence derived from alignment at Sc0000005:1139646..1141296- (Branchiostoma lanceolatum)
ATGGTTGGAAGCTCCCCGGGAGGCGGACTGAGTAACGTCCTGACGTTCTT
TCTGGACGCTGACCTTCCCCTCAGCATGACCATGACCTTCGTGTCAACCG
TCCTGGCTCTGGGGATGATGCCGCTCTCACTCTTCATCTATGGACGGGCG
TTCCAGCTTGATAGCATCAACGTGCCCTTCTTGAACATCATCATCTCCCT
CGTCTCCATCACCATCCCCGAGCTGCTGGGAATTCTCCTGCGGCACAAGA
AGCCGCGCATCGCTGACAAGGTCATGAAGGTGATCCGGCTCGTCAGCGCG
CTCTTCATCATCGCGCTGGTGGTGATTGGTGTCATGGTCAACACTCACGT
CATCTACACGCCTTGGCAGCCCATCGTGGCATGCTTTCTGTTGCCGCTGG
CTGGATTCATCATCGGCTTTGGGCTGGCAAAGATGTTCTGCCTCGACAAC
AACAGAGCCAGAACCGTCTCCATAGAAACCGGGGTGCAGAACGGAACGCT
GGCTTCCGCCATGATCAGACTCTCGTTCCCACAGCCGGAAGCAGACCTCT
CGTTCTCACTGTCTTTTCTGAACGGCATGTTCCAGGTTGGCCTTTCGCTG
CTGGCAGTTGCAGTGTATAATATCTACAAGTGTAAAAATCCCACCACCGA
AGAAGTAAAGATGACTGATCTTGAGGGAAAAGAGAATTCCGTTGTGATAT
CTGATGTCAAAGAGTAAATGGTTGGAAGCTCCCCGGGAGGCGGACTGAGT
AACGTCCTGACGTTCTTTCTGGACGCTGACCTTCCCCTCAGCATGACCAT
GACCTTCGTGTCAACCGTCCTGGCTCTGGGGATGATGCCGCTCTCACTCT
TCATCTATGGACGGGCGTTCCAGCTTGATAGCATCAACGTGCCCTTCTTG
AACATCATCATCTCCCTCGTCTCCATCACCATCCCCGAGCTGCTGGGAAT
TCTCCTGCGGCACAAGAAGCCGCGCATCGCTGACAAGGTCATGAAGGTGA
TCCGGCTCGTCAGCGCGCTCTTCATCATCGCGCTGGTGGTGATTGGTGTC
ATGGTCAACACTCACGTCATCTACACGCCTTGGCAGCCCATCGTGGCATG
CTTTCTGTTGCCGCTGGCTGGATTCATCATCGGCTTTGGGCTGGCAAAGA
TGTTCTGCCTCGACAACAACAGAGCCAGAACCGTCTCCATAGAAACCGGG
GTGCAGAACGGAACGCTGGCTTCCGCCATGATCAGACTCTCGTTCCCACA
GCCGGAAGCAGACCTCTCGTTCTCACTGTCTTTTCTGAACGGCATGTTCC
AGGTTGGCCTTTCGCTGCTGGCAGTTGCAGTGTATAATATCTACAAGTGT
AAAAATCCCACCACCGAAGAAGTAAAGATGACTGATCTTGAGGGAAAAGA
GAATTCCGTTGTGATATCTGATGTCAAAGAGTAAATGGTTGGAAGCTCCC
CGGGAGGCGGACTGAGTAACGTCCTGACGTTCTTTCTGGACGCTGACCTT
CCCCTCAGCATGACCATGACCTTCGTGTCAACCGTCCTGGCTCTGGGGAT
GATGCCGCTCTCACTCTTCATCTATGGACGGGCGTTCCAGCTTGATAGCA
TCAACGTGCCCTTCTTGAACATCATCATCTCCCTCGTCTCCATCACCATC
CCCGAGCTGCTGGGAATTCTCCTGCGGCACAAGAAGCCGCGCATCGCTGA
CAAGGTCATGAAGGTGATCCGGCTCGTCAGCGCGCTCTTCATCATCGCGC
TGGTGGTGATTGGTGTCATGGTCAACACTCACGTCATCTACACGCCTTGG
CAGCCCATCGTGGCATGCTTTCTGTTGCCGCTGGCTGGATTCATCATCGG
CTTTGGGCTGGCAAAGATGTTCTGCCTCGACAACAACAGAGCCAGAACCG
TCTCCATAGAAACCGGGGTGCAGAACGGAACGCTGGCTTCCGCCATGATC
AGACTCTCGTTCCCACAGCCGGAAGCAGACCTCTCGTTCTCACTGTCTTT
TCTGAACGGCATGTTCCAGGTTGGCCTTTCGCTGCTGGCAGTTGCAGTGT
ATAATATCTACAAGTGTAAAAATCCCACCACCGAAGAAGTAAAGATGACT
GATCTTGAGGGAAAAGAGAATTCCGTTGTGATATCTGATGTCAAAGAGTA
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:1139646..1141296 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95112_evm2 |
| Biotype | protein_coding |
|
