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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL85111_cuf2 >transcript:BL85111_cuf2-protein ID=transcript:BL85111_cuf2-protein|Name=transcript:BL85111_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=176bp
QAILRETCIMLLCGHHANVIGLKGICFRDGPLQLVLEYAEHGSLLHLLWT
LRAESKLNRTVLVNKRHIFENMMVEVCCGLEHLASRRLVHRDIAARNILI
CGKGTAKIADFGLARDMYAVGYHRQDRGTDLLPLKWMAPEGLKNEARFTH
KSDVWSFGVLLWEVAQLGRTPYPGME Run BLAST on NCBI mRNA from alignment at Sc0000004:6621836..6623391+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL85111_cuf2 ID=transcript:BL85111_cuf2|Name=transcript:BL85111_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1556bp|location=Sequence derived from alignment at Sc0000004:6621836..6623391+ (Branchiostoma lanceolatum)
CAAGCCATTCTGAGGGAAACCTGCATCATGTTGTTGTGTGGTCACCATGC
CAACGTCATCGGGCTGAAAGGCATCTGTTTTAGAGACGGTCAGTTTTAGA
CTTTGGCTCATTGATACGTTTGCTTGTCCGGTGGTACAACAACGTTACTT
TGCAATCAGTAGGAGCTGTGGTAGTTAAATATGTGTAGGTGTGGACAAGG
ATAAAGTACGTCTCTGGTTACAAACAGGCAAAAGAGCCCACTGGCAGTAA
AGAGTGACATGTATCTGTTGCATGTCCATATCCACATGTCTGTTTTTATC
TACCTCTATCAGCTCTTATGGCAAATAGACAGTGACCTCGGAGCACCAAA
TGGCCATGAAAAAATGCCTCATAAAAAGGTCAGCAGTTGGAACATATTGA
GCTTATCATCGCATGATGTCGACCCACAGTTGACCCTGGTCTGTTTTCCT
GCAGGGCCGCTCCAACTGGTGCTGGAATATGCCGAACACGGGAGTCTCCT
TCACCTGCTGTGGACGTTACGTGCGGAGTCCAAACTCAACAGGACCGTTC
TGGTCAACAAACGGCACATCTTCGAGAACATGATGGTGGAAGTGTGCTGC
GGCCTGGAGCATCTGGCTAGTAGGAGGGTGAGAAACTATTAAACTATTAT
ACCGTAAAATGTTCGCGGTGAAACGGTCGCCTCGAAAACCTCGAACATAC
AACCACCGCGAACATTTCTGCATTTACGGTATCGCTTCTCTTAAATCTTT
ACAGTAATCGTAACATACTCAGAGACGACAGAGACACATGACAGACTCTC
TAATGTTTCAACGTTAGCGAAGTTCATATAATATTAGAATGTCGTCTTTG
AACTTTAGCTTTGTCATCAACAATTGCTTACGAAAACTGGTCAAAAGGTA
TTATAGCAACTTTTCTTCATCTTTTTCAGCTGGTTCACCGAGACATCGCG
GCCCGGAACATCCTGATCTGTGGGAAGGGAACCGCCAAGATCGCGGACTT
CGGGCTGGCCCGGGACATGTACGCTGTGGGGTACCATCGGCAGGACAGGG
TAGGTCGGACGCTGAAGCTTCATTAGTATCACCGTGTGTTAAGATGACTC
CAAAATTAGAGCACCGGATTCTGTGCATCTGGGGTTTCAGTCTGAGTCTT
GTAAACAAATGAATGCCACATATTTAAATAGAAATTGAAACAATACAACT
CTGCCATGCATGTCGTTGGCTTTGGCAACACAGAACAATTAGTATGTTTA
GATGACTCCAGTCCAATTTTGGAGCACCAACAAATATACCCTGATGTTCC
TGCAGGGCACCGACCTCCTGCCGCTGAAGTGGATGGCGCCGGAGGGTCTG
AAGAACGAGGCTAGGTTCACCCACAAGAGCGACGTGTGAGTATTGAAAGC
TGTCTTTTAATTGCCAAACTCACAAACGTCCTTCTAGCTACGGACAGCTG
TCGAGCTTTACATCATCTTTAACACCTTTACTTTCCAGCTGGTCCTTCGG
GGTTCTGTTGTGGGAAGTTGCGCAGCTGGGCCGCACGCCGTACCCTGGGA
TGGAGG Coding sequence (CDS) from alignment at Sc0000004:6621836..6623391+ >transcript:BL85111_cuf2 ID=transcript:BL85111_cuf2|Name=transcript:BL85111_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2640bp|location=Sequence derived from alignment at Sc0000004:6621836..6623391+ (Branchiostoma lanceolatum)
CAAGCCATTCTGAGGGAAACCTGCATCATGTTGTTGTGTGGTCACCATGC
CAACGTCATCGGGCTGAAAGGCATCTGTTTTAGAGACGGGCCGCTCCAAC
TGGTGCTGGAATATGCCGAACACGGGAGTCTCCTTCACCTGCTGTGGACG
TTACGTGCGGAGTCCAAACTCAACAGGACCGTTCTGGTCAACAAACGGCA
CATCTTCGAGAACATGATGGTGGAAGTGTGCTGCGGCCTGGAGCATCTGG
CTAGTAGGAGGCTGGTTCACCGAGACATCGCGGCCCGGAACATCCTGATC
TGTGGGAAGGGAACCGCCAAGATCGCGGACTTCGGGCTGGCCCGGGACAT
GTACGCTGTGGGGTACCATCGGCAGGACAGGGGCACCGACCTCCTGCCGC
TGAAGTGGATGGCGCCGGAGGGTCTGAAGAACGAGGCTAGGTTCACCCAC
AAGAGCGACGTCTGGTCCTTCGGGGTTCTGTTGTGGGAAGTTGCGCAGCT
GGGCCGCACGCCGTACCCTGGGATGGAGCAAGCCATTCTGAGGGAAACCT
GCATCATGTTGTTGTGTGGTCACCATGCCAACGTCATCGGGCTGAAAGGC
ATCTGTTTTAGAGACGGGCCGCTCCAACTGGTGCTGGAATATGCCGAACA
CGGGAGTCTCCTTCACCTGCTGTGGACGTTACGTGCGGAGTCCAAACTCA
ACAGGACCGTTCTGGTCAACAAACGGCACATCTTCGAGAACATGATGGTG
GAAGTGTGCTGCGGCCTGGAGCATCTGGCTAGTAGGAGGCTGGTTCACCG
AGACATCGCGGCCCGGAACATCCTGATCTGTGGGAAGGGAACCGCCAAGA
TCGCGGACTTCGGGCTGGCCCGGGACATGTACGCTGTGGGGTACCATCGG
CAGGACAGGGGCACCGACCTCCTGCCGCTGAAGTGGATGGCGCCGGAGGG
TCTGAAGAACGAGGCTAGGTTCACCCACAAGAGCGACGTCTGGTCCTTCG
GGGTTCTGTTGTGGGAAGTTGCGCAGCTGGGCCGCACGCCGTACCCTGGG
ATGGAGCAAGCCATTCTGAGGGAAACCTGCATCATGTTGTTGTGTGGTCA
CCATGCCAACGTCATCGGGCTGAAAGGCATCTGTTTTAGAGACGGGCCGC
TCCAACTGGTGCTGGAATATGCCGAACACGGGAGTCTCCTTCACCTGCTG
TGGACGTTACGTGCGGAGTCCAAACTCAACAGGACCGTTCTGGTCAACAA
ACGGCACATCTTCGAGAACATGATGGTGGAAGTGTGCTGCGGCCTGGAGC
ATCTGGCTAGTAGGAGGCTGGTTCACCGAGACATCGCGGCCCGGAACATC
CTGATCTGTGGGAAGGGAACCGCCAAGATCGCGGACTTCGGGCTGGCCCG
GGACATGTACGCTGTGGGGTACCATCGGCAGGACAGGGGCACCGACCTCC
TGCCGCTGAAGTGGATGGCGCCGGAGGGTCTGAAGAACGAGGCTAGGTTC
ACCCACAAGAGCGACGTCTGGTCCTTCGGGGTTCTGTTGTGGGAAGTTGC
GCAGCTGGGCCGCACGCCGTACCCTGGGATGGAGCAAGCCATTCTGAGGG
AAACCTGCATCATGTTGTTGTGTGGTCACCATGCCAACGTCATCGGGCTG
AAAGGCATCTGTTTTAGAGACGGGCCGCTCCAACTGGTGCTGGAATATGC
CGAACACGGGAGTCTCCTTCACCTGCTGTGGACGTTACGTGCGGAGTCCA
AACTCAACAGGACCGTTCTGGTCAACAAACGGCACATCTTCGAGAACATG
ATGGTGGAAGTGTGCTGCGGCCTGGAGCATCTGGCTAGTAGGAGGCTGGT
TCACCGAGACATCGCGGCCCGGAACATCCTGATCTGTGGGAAGGGAACCG
CCAAGATCGCGGACTTCGGGCTGGCCCGGGACATGTACGCTGTGGGGTAC
CATCGGCAGGACAGGGGCACCGACCTCCTGCCGCTGAAGTGGATGGCGCC
GGAGGGTCTGAAGAACGAGGCTAGGTTCACCCACAAGAGCGACGTCTGGT
CCTTCGGGGTTCTGTTGTGGGAAGTTGCGCAGCTGGGCCGCACGCCGTAC
CCTGGGATGGAGCAAGCCATTCTGAGGGAAACCTGCATCATGTTGTTGTG
TGGTCACCATGCCAACGTCATCGGGCTGAAAGGCATCTGTTTTAGAGACG
GGCCGCTCCAACTGGTGCTGGAATATGCCGAACACGGGAGTCTCCTTCAC
CTGCTGTGGACGTTACGTGCGGAGTCCAAACTCAACAGGACCGTTCTGGT
CAACAAACGGCACATCTTCGAGAACATGATGGTGGAAGTGTGCTGCGGCC
TGGAGCATCTGGCTAGTAGGAGGCTGGTTCACCGAGACATCGCGGCCCGG
AACATCCTGATCTGTGGGAAGGGAACCGCCAAGATCGCGGACTTCGGGCT
GGCCCGGGACATGTACGCTGTGGGGTACCATCGGCAGGACAGGGGCACCG
ACCTCCTGCCGCTGAAGTGGATGGCGCCGGAGGGTCTGAAGAACGAGGCT
AGGTTCACCCACAAGAGCGACGTCTGGTCCTTCGGGGTTCTGTTGTGGGA
AGTTGCGCAGCTGGGCCGCACGCCGTACCCTGGGATGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:6621836..6623391 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL85111_cuf2 |
| Biotype | protein_coding |
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