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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038314 ID=TCONS_00038314|Name=TCONS_00038314|organism=Clytia hemisphaerica|type=transcript|length=606bp
GCATGCACGTCGGTACAACTGCTTCGACTCTAGCTGTCAAGTCAACACAT
CAACAGAGAGCTTGTTGGTTAGGCTCCATTCACATTTTCAACTTCGATCG
TCGCTGACAAAATCAACTGCTCACATTCAACCACCAAACGATGTCTTTCA
CTAGTGAAACTGGAGACCAGATGTCTATGGATCTGAAGATAGCGAGTCTT
CGCAGAAAACGAGGAGGAAAGAAAGGCTCAATAACCAAACGAATCAACTT
GATTGAGGAAATTATGAAGATGAATGGCAGTCGTACCAGAATTCGCTCAT
TGTACGACTCGATGATTCTTGTTTTGGAAGAAGCTCACGTCATCAACCAA
AAACTTGAAGATCTTGGTGATGATACAGAAGGATGGATGGATGACATGAA
GTTTCAAACCGacaacatcaaatcaaagatcgaTGATTATCTTGAACTGC
TAAAAGATAATCCCCCGTCGGAAGCTGGTGGATCAGATTGGCTACTTGGA
AAATTCCTCCGAATGGACGAAGCACAAAAGGAAATCACCAAGGAGCTTGA
AAATTTGGTTCCAATCACAACACAACCGGCAAGCACACTAAACGTATCTG
CACCAG Run BLAST on NCBI transcript from alignment at sc0001824:15239..16018+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038314 ID=TCONS_00038314|Name=TCONS_00038314|organism=Clytia hemisphaerica|type=transcript|length=780bp|location=Sequence derived from alignment at sc0001824:15239..16018+ (Clytia hemisphaerica)
GCATGCACGTCGGTACAACTGCTTCGACTCTAGCTGTCAAGTCAACACAT
CAACAGAGAGCTTGTTGGTTAGGCTCtattcacactttcaacttcgAGCT
GTCAAGTCAACAACTGGAAACAATCTGGTGTTTTCAGTTCGAGTCAAGCT
TACGTTACCTTGATACAGACCGCTGCTTGCATGTCGGTACAACCGCTTCG
ACTCTAGCTTTCAAGTCAACACATCAACAGAGAGCTTGTTGGTTAGGCTC
CATTCACATTTTCAACTTCGATCGTCGCTGACAAAATCAACTGCTCACAT
TCAACCACCAAACGATGTCTTTCACTAGTGAAACTGGAGACCAGATGTCT
ATGGATCTGAAGATAGCGAGTCTTCGCAGAAAACGAGGAGGAAAGAAAGG
CTCAATAACCAAACGAATCAACTTGATTGAGGAAATTATGAAGATGAATG
GCAGTCGTACCAGAATTCGCTCATTGTACGACTCGATGATTCTTGTTTTG
GAAGAAGCTCACGTCATCAACCAAAAACTTGAAGATCTTGGTGATGATAC
AGAAGGATGGATGGATGACATGAAGTTTCAAACCGacaacatcaaatcaa
agatcgaTGATTATCTTGAACTGCTAAAAGATAATCCCCCGTCGGAAGCT
GGTGGATCAGATTGGCTACTTGGAAAATTCCTCCGAATGGACGAAGCACA
AAAGGAAATCACCAAGGAGCTTGAAAATTTGGTTCCAATCACAACACAAC
CGGCAAGCACACTAAACGTATCTGCACCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038314-exon-sc0001824-1491911889:15239..15286 | TCONS_00038314-exon-sc0001824-1491911889:15239..15286 | Clytia hemisphaerica | exon |
| TCONS_00038314-exon-sc0001824-1510915933:15239..15286 | TCONS_00038314-exon-sc0001824-1510915933:15239..15286 | Clytia hemisphaerica | exon |
| TCONS_00038314-exon-sc0001824-1575043694:15239..15286 | TCONS_00038314-exon-sc0001824-1575043694:15239..15286 | Clytia hemisphaerica | exon |
| TCONS_00038314-exon-sc0001824-1491911889:15461..16018 | TCONS_00038314-exon-sc0001824-1491911889:15461..16018 | Clytia hemisphaerica | exon |
| TCONS_00038314-exon-sc0001824-1510915933:15461..16018 | TCONS_00038314-exon-sc0001824-1510915933:15461..16018 | Clytia hemisphaerica | exon |
| TCONS_00038314-exon-sc0001824-1575043694:15461..16018 | TCONS_00038314-exon-sc0001824-1575043694:15461..16018 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001824 | supercontig | sc0001824:15239..16018 + |
Blast
The following BLAST results are available for this feature:
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