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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036310 ID=TCONS_00036310|Name=TCONS_00036310|organism=Clytia hemisphaerica|type=transcript|length=1168bp
CTCAGCCAGTACAAATGGATAACTTATTCTATCTCTAGGTAACAGCTGTG
TTGTAAGAGACAAATCAATGTGATGACGTTATCATTAAACAAATTTCTGC
TGGAGTAAtcagttattcaaaagactgccGCATTCTCCTAAACAACTATT
TCCATGAattgaaattctcaaaattttagcTATGActttaatttggcaaa
aatcacaaaatttgaagattaaaATCTATCATTTCATTTCAAGGTGCTTT
GGTagcttcaaaaagaaattacgTTCCACACGCGTTTCTTCAATTTATGA
GATTGCCGATGTCTGTGACAAGTCAAAATGCAATTTCTCAGTGCTGGTTG
GTAACCACAATAAAGAGATGAATGTCCACACATACGACTGGACTacctat
tttgaaaaagttctcaATTTCAAGACGATAAAGGACTTATTATCGTACCA
CCAATTTCGTATGTCAAAGGATGAACCTGGTATCGTCCACTGCTATGCAT
CCCTCGATGATGAACCAACAACCGTTtccattttcaagaaaaatagtACA
ACTAGCATTACACCAGTGTTGCCAAATATTGTTGAACCAAAAGGATTTNA
CCGTTtccattttcaagaaaaatagtACAACTAGCATTACACCAGTGTTG
CCAAATATTGTTGAACCAAAAGGATTTACCAAACAACGCACTGATTATCT
CCGAAAAGAAATTCGTCAACTCTGCCGTCCTGGAACAGAGGATTTAGTTG
CACCTTGATTGAAAGGATCTTCACGCTTATTTTATATTCAGTTTGTAATT
ACGGTAGTGGCTaaaactttctgaagtttttgCAATTTATGAGTCAATTA
CAACAATTTCTAGCCATTTAAACTTTTCACTGATTGTGTCCTCTTCACTG
CAGCATTGATTGAACcagtaaaaaaagaagaatgatggaattttttatct
tcatataATTTTGATTAGTGATATTGTATGGTTTATTTAGTGTTCTTTGT
TTTgagtctaaaaataaaaatatcattaCTGTAAAAAGGATACGTGGACA
AATAAACAATATTTGTCGGTGTGGATGGTGTACTGATATAAATATTTTAC
AACCGATATGAGCCAGTCTGGAAATAATGCAAAGCATACGTCAAGTGTGT
TATATTGACAACATTTAC Run BLAST on NCBI transcript from alignment at sc0001439:242..1409- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036310 ID=TCONS_00036310|Name=TCONS_00036310|organism=Clytia hemisphaerica|type=transcript|length=1168bp|location=Sequence derived from alignment at sc0001439:242..1409- (Clytia hemisphaerica)
CTCAGCCAGTACAAATGGATAACTTATTCTATCTCTAGGTAACAGCTGTG
TTGTAAGAGACAAATCAATGTGATGACGTTATCATTAAACAAATTTCTGC
TGGAGTAATCAGTTATTCAAAAGACTGCCGCATTCTCCTAAACAACTATT
TCCATGAATTGAAATTCTCAAAATTTTAGCTATGACTTTAATTTGGCAAA
AATCACAAAATTTGAAGATTAAAATCTATCATTTCATTTCAAGGTGCTTT
GGTAGCTTCAAAAAGAAATTACGTTCCACACGCGTTTCTTCAATTTATGA
GATTGCCGATGTCTGTGACAAGTCAAAATGCAATTTCTCAGTGCTGGTTG
GTAACCACAATAAAGAGATGAATGTCCACACATACGACTGGACTACCTAT
TTTGAAAAAGTTCTCAATTTCAAGACGATAAAGGACTTATTATCGTACCA
CCAATTTCGTATGTCAAAGGATGAACCTGGTATCGTCCACTGCTATGCAT
CCCTCGATGATGAACCAACAACCGTTTCCATTTTCAAGAAAAATAGTACA
ACTAGCATTACACCAGTGTTGCCAAATATTGTTGAACCAAAAGGATTTNA
CCGTTTCCATTTTCAAGAAAAATAGTACAACTAGCATTACACCAGTGTTG
CCAAATATTGTTGAACCAAAAGGATTTACCAAACAACGCACTGATTATCT
CCGAAAAGAAATTCGTCAACTCTGCCGTCCTGGAACAGAGGATTTAGTTG
CACCTTGATTGAAAGGATCTTCACGCTTATTTTATATTCAGTTTGTAATT
ACGGTAGTGGCTAAAACTTTCTGAAGTTTTTGCAATTTATGAGTCAATTA
CAACAATTTCTAGCCATTTAAACTTTTCACTGATTGTGTCCTCTTCACTG
CAGCATTGATTGAACCAGTAAAAAAAGAAGAATGATGGAATTTTTTATCT
TCATATAATTTTGATTAGTGATATTGTATGGTTTATTTAGTGTTCTTTGT
TTTGAGTCTAAAAATAAAAATATCATTACTGTAAAAAGGATACGTGGACA
AATAAACAATATTTGTCGGTGTGGATGGTGTACTGATATAAATATTTTAC
AACCGATATGAGCCAGTCTGGAAATAATGCAAAGCATACGTCAAGTGTGT
TATATTGACAACATTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036310-exon-sc0001439-1575043694:242..1409 | TCONS_00036310-exon-sc0001439-1575043694:242..1409 | Clytia hemisphaerica | exon |
| TCONS_00036310-exon-sc0001439-1510915933:242..1409 | TCONS_00036310-exon-sc0001439-1510915933:242..1409 | Clytia hemisphaerica | exon |
| TCONS_00036310-exon-sc0001439-1491911889:242..1409 | TCONS_00036310-exon-sc0001439-1491911889:242..1409 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001439 | supercontig | sc0001439:242..1409 - |
Blast
The following BLAST results are available for this feature:
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