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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036161 ID=TCONS_00036161|Name=TCONS_00036161|organism=Clytia hemisphaerica|type=transcript|length=775bp
TCTGATTTTCCAGGTAGAAAGATCAGATGTCACAGAAGATTGGATGTTTT
ATAAAGTCTATTGTAGTCTATTGGAGAGCCTTATTGTTGTAGCAAATGAG
ATATTACAGTTGTCAATTCCTTTTCctgaggcccggaaaacccaaCCAAG
CAACGATCGAAGCCCAAGAAGCTGATATTTTGAGCCTAAAAGCACAATTA
GCCGagttGAAAGCAAAGAAAATCCGAAGTCACCCCGTGGAGCAATGCAA
CTTATACTCCAATATGACAGGAAAATATGGAAGGTCCAGGAcatttcgtt
tttcaaaattacgtaagctaagggaccattcaaaaatcattttaaaagag
gctattagccaaaattgattttttttaatttttgcctgTAATCTGCTGGC
TGTGCCCCTAAGCTCCAACCTTTCACAGGCAAAAATCAAAGATATCAATT
TTGGCTTCTTTaaatgattttaaagctttttcgtagtaatatttttgttC
CCGAAGGTTTTCTCTCGAAtgagccaaaaaaaattgaatttggacccttt
ttcatttttcaatgacgtcatcatttatgacgtcattttgtcttattttc
tTAACATCTCGAGATATATACATTTAGGTtgcatagtgtgcacccccccc
agaatagtggggggggggttttgctgatttgggtcgaaaattttcaggtg
ggatttagggttttccaggttttaggtgggagaaacaagttaaggtggga
gttaatttctttaggtgggactttg Run BLAST on NCBI transcript from alignment at sc0001420:58231..59294- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036161 ID=TCONS_00036161|Name=TCONS_00036161|organism=Clytia hemisphaerica|type=transcript|length=1064bp|location=Sequence derived from alignment at sc0001420:58231..59294- (Clytia hemisphaerica)
TCTGATTTTCCAGGTAGAAAGATCAGATGTCACAGAAGATTGGATGTTTT
ATAAAGTCTATTGTAGTCTATTGGAGAGCCTTATTGTTGTAGCAAATGAG
ATATTACAGTTGTCAATTCCTTTTCCTGAGGCCCGGAAAACCCAACCAAG
CAACGATCGAAGCCCAAGAAGCTGATATTTTGAGCCTAAAAGCACAATTA
GCCGGTGAGTATTTTTATTTACGGCTGTGCAAGTCAAAAGAAGATTTTTG
CAAGATTTGCAATTAACTAGATTTTACAATTTCTTCTGCAAGTGAAATCT
TTTTCCAATATTATTTGAAACATTTGCATCTCTNTATTTTTATTTACGGC
TGTGCAAGTCAAAAGAAGATTTTTGCAAGATTTGCAATCAACTAAATTTT
ACAATTTCTTCTGCAAGTGAAATCTTTTTCCAATATTATTTGAAACATTT
TCATCTCTACGGAAAGGATAATTTAATTTATTTTATTTTTCAGAGTTGAA
AGCAAAGAAAATCCGAAGTCACCCCGTGGAGCAATGCAACTTATACTCCA
ATATGACAGGAAAATATGGAAGGTCCAGGACATTTCGTTTTTCAAAATTA
CGTAAGCTAAGGGACCATTCAAAAATCATTTTAAAAGAGGCTATTAGCCA
AAATTGATTTTTTTTAATTTTTGCCTGTAATCTGCTGGCTGTGCCCCTAA
GCTCCAACCTTTCACAGGCAAAAATCAAAGATATCAATTTTGGCTTCTTT
AAATGATTTTAAAGCTTTTTCGTAGTAATATTTTTGTTCCCGAAGGTTTT
CTCTCGAATGAGCCAAAAAAAATTGAATTTGGACCCTTTTTCATTTTTCA
ATGACGTCATCATTTATGACGTCATTTTGTCTTATTTTCTTAACATCTCG
AGATATATACATTTAGGTTGCATAGTGTGCACCCCCCCCAGAATAGTGGG
GGGGGGGTTTTGCTGATTTGGGTCGAAAATTTTCAGGTGGGATTTAGGGT
TTTCCAGGTTTTAGGTGGGAGAAACAAGTTAAGGTGGGAGTTAATTTCTT
TAGGTGGGACTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036161-exon-sc0001420-1575043694:59091..59294 | TCONS_00036161-exon-sc0001420-1575043694:59091..59294 | Clytia hemisphaerica | exon |
| TCONS_00036161-exon-sc0001420-1575043694:58231..58801 | TCONS_00036161-exon-sc0001420-1575043694:58231..58801 | Clytia hemisphaerica | exon |
| TCONS_00036161-exon-sc0001420-1510915933:59091..59294 | TCONS_00036161-exon-sc0001420-1510915933:59091..59294 | Clytia hemisphaerica | exon |
| TCONS_00036161-exon-sc0001420-1510915933:58231..58801 | TCONS_00036161-exon-sc0001420-1510915933:58231..58801 | Clytia hemisphaerica | exon |
| TCONS_00036161-exon-sc0001420-1491911889:59091..59294 | TCONS_00036161-exon-sc0001420-1491911889:59091..59294 | Clytia hemisphaerica | exon |
| TCONS_00036161-exon-sc0001420-1491911889:58231..58801 | TCONS_00036161-exon-sc0001420-1491911889:58231..58801 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001420 | supercontig | sc0001420:58231..59294 - |
Blast
The following BLAST results are available for this feature:
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