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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036077 ID=TCONS_00036077|Name=TCONS_00036077|organism=Clytia hemisphaerica|type=transcript|length=2329bp
AATACTCTGAAAGAATATCTTCGATATAAAACGGAAATCTGCTGGAATAC
AATATCTCAATCTTGAGACACTGAACGAAATTACAAAGTCTGAAACTTTT
TAATATTGTGGCTGAGTCATCTACCGAGAATACACAATGAACTCCATTGT
GGTTCTAACCACGCTGCTATTTCTACTGGTATCTACATCGTATGGTGAGA
TCGATGCTGAAAACAAACGCGAATCTGTTGTTGTTGATTCATCAAATTCA
AACAATGCTTTAGAAGAGATCAAAAAAGTTGCTGACAAAGCTATTGAAAC
ATTGGAAAAAGAACTTTTAAAGAAAAAATCTTCTTTAATTAACACTGGTG
ATGCATCCAAAGAAGTCCAACAAAATGAAAATGCTGACATCAACAAAAAG
AAGAATTCAGTTGTAACCAAGGACGAGGGAAAGGATATTGTTGTTAAGGA
AATAAAAAACACTGCAGCAATGACTACAGATACCGGAATGGATGAAAAGC
GTTCTGCCGACAGACCATGGATCAAATTAAAGAAAGAATCTAACCTACCC
TGGAATGCCGCTGAAAGTAAAAAAGAATCACTACCTTTCTACATGTCCAA
AAAGAAAGGTAAAAAGGAATATCAACGCCAACACCTTCCATGGGAAATGA
AAACTAACAAGATCAACAAGAAAAATGCGTTACCGTTTTATGACGTCAAG
AAAAGCGAACTTCCTTTTTATATGGCGAAAAAAAGCGAACTTCCTTTCTA
TATGGCAAAGAAGGAAGCCTTACCTTGGTATAGTCAAGCAAATAAGAAGG
ATGCATTGCCGTTCTACATAGCAAAGAAAAGTGAGCTCCCATTTTACATG
GCGAAAAAAAGTGCACTTCCATTTTATATGGCAAAGAAAAATGCTCTACC
CGTGAAATTTTTCTTGTCAAAGAAAAACGCGTTACCGTTTTACATGTCCA
AGAAAGACGAGCTACCTTTCTACATGAAAAAGTCAGCTCTCCCGTTTTAC
ATGGCTAAAAAAGAAGCTCTTCCTTTCTATATGAAGAAATCTACGTTACC
ATTTTATATGGCTAAAAAAGAATCATTACCGTTTTACAACACAAAGAAGT
CCGCATCTCAAGCTTTACCCTTCTATGATGTTAAGAAGTCCGCCCTACCT
TTTTACAGTGCAAAGAAGTCCGCCCTCCCATTTGATGGTGTCAAAAAGAG
TACCCTCCCCTTTTACCACGCCAAGAAATCAGCCCTTCCTTTCTATATTG
CTAAAAAAAGCGAGTTACCGTTTTACAGCTCGAAGAAATCCGCCCTACCG
TTTTATGACGTCAAGAAATCCGCCCTACCGTTTTATGACGTAAAGAAGGA
AACTCTGCCATTTTACATGGCCTAGGAAAATACTTTCCCATTCTTCTCGA
AGGAGAGTCAACCTTTTGCTTTATAATAACATATTAAACGCTGTATTGAA
AATAACGGttcaaaataattaaaacaCTTAAGAAGAATAAGAAGATTCTG
AAGACATTCTTAGAACATTCTTAGCTTATTCTCCgttaaaatattttggt
tttgtAATCAAAGAtcctagaaattttcaaatttgatgttttatttttga
atattcaGTGGAATATACTCATTATATCTTAAGAGTATATATTTTCGTCG
CGAAtcgcgaatttttttttgagaaacgTGTTTCGCGAGTTCTAATTTAC
GCGATTGCGACTTTCcacgtgtattaaatttcgtgaACCACTAAATTCGA
TATTATCAAACAAGAGTATTAAAAAAGCAAGAAAAGGATTGCTTTTGCCT
GAATCACAACGTGATAGGTGcaaaaaaggtgtcaaaattGCGGAATAAAA
TGGTGACAAAAAGTAAGCCATTGGGAAAATACTTTGGcgtattttcaagg
tttttcacgtctatcatttttgcaatttttgaaagtcaaacagtactaaa
ttttgcgaaattttacCTAAAAACTCACGGAATCAAGTACACGCGAAAAC
TTAGTACCCAGGAAAACAAATACGCTTaaggtatttttgtttttttattt
ttcaagcaCTAACACTATAATCGTCCCTGTGGGGATGCTATTAGGCCCGT
GGGGgtggggtactagggttgcgagctgacggggagGTGCCACCTGACTT
TCGATcctggacccttaccgggactaaaaagcaaaaaacaatggacaatt
ttgtaaattttacgacccttattaggaaaaatttttccgaccctcAGTGG
GACtgatatttgattttctgaattttctgacccttagcgggactttggaa
atccaaaaaaggcaccctcaaaggcggca Run BLAST on NCBI transcript from alignment at sc0001410:56317..58954- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036077 ID=TCONS_00036077|Name=TCONS_00036077|organism=Clytia hemisphaerica|type=transcript|length=2638bp|location=Sequence derived from alignment at sc0001410:56317..58954- (Clytia hemisphaerica)
AATACTCTGAAAGAATATCTTCGATATAAAACGGAAATCTGCTGGAATAC
AATATCTCAATCTTGAGACACTGAACGAAATTACAAAGTCTGAAACTTTT
TAATATTGTGGCTGAGTCATCTACCGAGAATACACAATGAACTCCATTGT
GGTTCTAACCACGCTGCTATTTCTACTGGTATCTACATCGTATGGTGAGA
TCGATGCTGAAAACAAACGCGAATCTGTTGTTGTTGATTCATCAAATTCA
AACAATGCTTTAGAAGAGATCAAAAAAGTTGCTGACAAAGCTATTGAAAC
ATTGGAAAAAGAACTTTTAAAGAAAAAATCTTCTTTAATTAACACTGGTG
ATGCATCCAAAGAAGTCCAACAAAATGAAAATGCTGACATCAACAAAAAG
AAGAATTCAGTTGTAACCAAGGACGAGGGAAAGGATATTGTTGTTAAGGA
AATAAAAAACACTGCAGCAATGACTACAGATACCGGAATGGATGAAAAGC
GTTCTGCCGACAGACCATGGATCAAATTAAAGAAAGAATCTAACCTACCC
TGGAATGCCGCTGAAAGTAAAAAAGAATCACTACCTTTCTACATGTCCAA
AAAGAAAGGTAAAAAGGAATATCAACGCCAACACCTTCCATGGGAAATGA
AAACTAACAAGATCAACAAGAAAAATGCGTTACCGTTTTATGACGTCAAG
AAAAGCGAACTTCCTTTTTATATGGCGAAAAAAAGCGAACTTCCTTTCTA
TATGGCAAAGAAGGAAGCCTTACCTTGGTATAGTCAAGCAAATAAGAAGG
ATGCATTGCCGTTCTACATAGCAAAGAAAAGTGAGCTCCCATTTTACATG
GCGAAAAAAAGTGCACTTCCATTTTATATGGCAAAGAAAAATGCTCTACC
CGTGAAATTTTTCTTGTCAAAGAAAAACGCGTTACCGTTTTACATGTCCA
AGAAAGACGAGCTACCTTTCTACATGAAAAAGTCAGCTCTCCCGTTTTAC
ATGGCTAAAAAAGAAGCTCTTCCTTTCTATATGAAGAAATCTACGTTACC
ATTTTATATGGCTAAAAAAGAATCATTACCGTTTTACAACACAAAGAAGT
CCGCATCTCAAGCTTTACCCTTCTATGATGTTAAGAAGTCCGCCCTACCT
TTTTACATGAAGAAGTCCGCCCTACCATTTTACATGAAGAAGTCCGCCCT
ACCATCTTACAATGCGAAGAAGTCCGCCCTGCCTTTTTACGTGAAGAAGT
CCGCCCTACCTTTTTACATGAAGAAGTCCGCCCTACCTTTTTACATGAAG
AAGTCCACTTTACCATTTTACATGAAGAAGTCCGCCCTCCCATTTTACAA
TGCAAAGAAGTCCACCCTACCATTTTACACTGCGAAGAAGTCTACCCTAC
CATTTTACATGAAGAAGTCCGCCCTACCATTTTACATTGCAAAGAAGTCC
GCCCTAACATTTTACAGTGCAAAGAAGTCCGCCCTCCCATTTGATGGTGT
CAAAAAGAGTACCCTCCCCTTTTACCACGCCAAGAAATCAGCCCTTCCTT
TCTATATTGCTAAAAAAAGCGAGTTACCGTTTTACAGCTCGAAGAAATCC
GCCCTACCGTTTTATGACGTCAAGAAATCCGCCCTACCGTTTTATGACGT
AAAGAAGGAAACTCTGCCATTTTACATGGCCTAGGAAAATACTTTCCCAT
TCTTCTCGAAGGAGAGTCAACCTTTTGCTTTATAATAACATATTAAACGC
TGTATTGAAAATAACGGTTCAAAATAATTAAAACACTTAAGAAGAATAAG
AAGATTCTGAAGACATTCTTAGAACATTCTTAGCTTATTCTCCGTTAAAA
TATTTTGGTTTTGTAATCAAAGATCCTAGAAATTTTCAAATTTGATGTTT
TATTTTTGAATATTCAGTGGAATATACTCATTATATCTTAAGAGTATATA
TTTTCGTCGCGAATCGCGAATTTTTTTTTGAGAAACGTGTTTCGCGAGTT
CTAATTTACGCGATTGCGACTTTCCACGTGTATTAAATTTCGTGAACCAC
TAAATTCGATATTATCAAACAAGAGTATTAAAAAAGCAAGAAAAGGATTG
CTTTTGCCTGAATCACAACGTGATAGGTGCAAAAAAGGTGTCAAAATTGC
GGAATAAAATGGTGACAAAAAGTAAGCCATTGGGAAAATACTTTGGCGTA
TTTTCAAGGTTTTTCACGTCTATCATTTTTGCAATTTTTGAAAGTCAAAC
AGTACTAAATTTTGCGAAATTTTACCTAAAAACTCACGGAATCAAGTACA
CGCGAAAACTTAGTACCCAGGAAAACAAATACGCTTAAGGTATTTTTGTT
TTTTTATTTTTCAAGCACTAACACTATAATCGTCCCTGTGGGGATGCTAT
TAGGCCCGTGGGGGTGGGGTACTAGGGTTGCGAGCTGACGGGGAGGTGCC
ACCTGACTTTCGATCCTGGACCCTTACCGGGACTAAAAAGCAAAAAACAA
TGGACAATTTTGTAAATTTTACGACCCTTATTAGGAAAAATTTTTCCGAC
CCTCAGTGGGACTGATATTTGATTTTCTGAATTTTCTGACCCTTAGCGGG
ACTTTGGAAATCCAAAAAAGGCACCCTCAAAGGCGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036077-exon-sc0001410-1575043694:57799..58954 | TCONS_00036077-exon-sc0001410-1575043694:57799..58954 | Clytia hemisphaerica | exon |
| TCONS_00036077-exon-sc0001410-1575043694:56317..57489 | TCONS_00036077-exon-sc0001410-1575043694:56317..57489 | Clytia hemisphaerica | exon |
| TCONS_00036077-exon-sc0001410-1510915933:57799..58954 | TCONS_00036077-exon-sc0001410-1510915933:57799..58954 | Clytia hemisphaerica | exon |
| TCONS_00036077-exon-sc0001410-1510915933:56317..57489 | TCONS_00036077-exon-sc0001410-1510915933:56317..57489 | Clytia hemisphaerica | exon |
| TCONS_00036077-exon-sc0001410-1491911889:57799..58954 | TCONS_00036077-exon-sc0001410-1491911889:57799..58954 | Clytia hemisphaerica | exon |
| TCONS_00036077-exon-sc0001410-1491911889:56317..57489 | TCONS_00036077-exon-sc0001410-1491911889:56317..57489 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001410 | supercontig | sc0001410:56317..58954 - |
Blast
The following BLAST results are available for this feature:
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