TCONS_00035995 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035995
Unique NameTCONS_00035995
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length266

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035995 ID=TCONS_00035995|Name=TCONS_00035995|organism=Clytia hemisphaerica|type=transcript|length=266bp
CTCCTTCTTTTGATGTAGTCCaaactttctgtttatttttgcATACTTTA
ACAATTGGAATAGGCATGGCCAAAAGACGACCGTCAAAACTAGAGCAAAT
AAGGGGCGTTGAGACTAGAGCAAAAACGACATTTCTATTTGAAAACAACC
ACCAAAGTCTGTTATCCAGCCAACATCTTTAAATCATCTATCCAATAATT
AAAAGATTTCGGAATTCCAAGATTTGCTAAAGTTTGTTTATCAAGACACT
TGTTTCGTTTGAGTTG
Run BLAST on NCBI

transcript from alignment at sc0001399:20867..21132

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035995 ID=TCONS_00035995|Name=TCONS_00035995|organism=Clytia hemisphaerica|type=transcript|length=266bp|location=Sequence derived from alignment at sc0001399:20867..21132 (Clytia hemisphaerica)
CAACTCAAACGAAACAAGTGTCTTGATAAACAAACTTTAGCAAATCTTGG
AATTCCGAAATCTTTTAATTATTGGATAGATGATTTAAAGATGTTGGCTG
GATAACAGACTTTGGTGGTTGTTTTCAAATAGAAATGTCGTTTTTGCTCT
AGTCTCAACGCCCCTTATTTGCTCTAGTTTTGACGGTCGTCTTTTGGCCA
TGCCTATTCCAATTGTTAAAGTATgcaaaaataaacagaaagtttGGACT
ACATCAAAAGAAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021152XLOC_021152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035995-exon-sc0001399-1491911889:20867..21132TCONS_00035995-exon-sc0001399-1491911889:20867..21132Clytia hemisphaericaexon
TCONS_00035995-exon-sc0001399-1510915933:20867..21132TCONS_00035995-exon-sc0001399-1510915933:20867..21132Clytia hemisphaericaexon
TCONS_00035995-exon-sc0001399-1575043694:20867..21132TCONS_00035995-exon-sc0001399-1575043694:20867..21132Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001399supercontigsc0001399:20867..21132 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.80109	1.1709	0.679763	0	18.6214	7.03754	3.08745	2.89043	5.05915	3.75995	3.04125	3.99839	3.19427	0.41466	1.36363	2.56091	0.901382	3.69555	1.2764	0.667831	1.16093	1.69879	2.75346	4.38077	1.93375	0	0	1.75712	11.3281	8.14695
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035995 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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