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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035790 ID=TCONS_00035790|Name=TCONS_00035790|organism=Clytia hemisphaerica|type=transcript|length=990bp
AGACAATTGACAATAATGTATTAATGGATTCATTGCAGTGTATGGATTCA
TTTTCATTGGATACTAGTTTAAGTATGATCATAACTTGGATAGATTCAAC
TGGGTGTTTGGATATCTGTATCTCTCTGGAGGCAATTGATGGACATGACG
TGTTGATAGATTCATCAAGTGGTGCGAGCATGACTTCATCTGATGCTAGT
TCAGTTGGAGTGTCATCTGAAGGTTTGatggtttgttttttatcttgttc
acgattaaaaaaTGAGATAGTGTTCCCCGGTATTGATGGTAATAGTTGCA
ATGACTTGGTTTGGTTATCACAGCCAACTTGGCTTGGTAGACACGTTCAA
GTTTATAAAGTTCTAAACATTTTCTATTGACATTCTCCATATGTTGCAAA
AGTGATGTATTGACAGTAGTTGGTAGTTTCAGCAATTGTTCTTCCATTGC
ACTTATTTCAGGATACAATTTTGGTGCCTCAGATTTAAGAATAAGAATTT
GAGAACCATTTAATGAACTCAAATCTCTTGTAAGTGTTTCATTGAGTTTT
GACACAACCTTTTCAATTTTGTCCAAGGTGTGTTGTAAGTTTTGCTCGAT
AGCGTCAAGTTCTATGTTGTTGCTAGCTTGGTTCAATAAACGAAGATGGT
TGCTGGCTGGgatgatgaactttttgatGGATGGGATGAAATCGTTAATA
TGGTTAGTGAGCTGAATATGTTCATCATCGGTGGTAGACAAGTTTGATCG
ATATTGTCGTAAGGTAAGACGGTCATTTCTCAGCTTTTTGATAATGTTGG
TGAGCTCTTCTTTTGAGCTTTGGTATATGTCCACGACTCTTAGTGTGTAC
TTGATCTTTTCCAGTAGTAGGGTAGCTTTGGAGTGATAGTCTGCCATGAT
TAGTATTCGAGTTACAGTAGACGATATTGATAGAATGATCACAATTCTGT
TGTTGATCGACAACAAATCAGAACAATGGGTGATCGATGA Run BLAST on NCBI protein sequence of TCONS_00035790-protein >TCONS_00035790-protein ID=TCONS_00035790-protein|Name=TCONS_00035790-protein|organism=Clytia hemisphaerica|type=polypeptide|length=264bp
SSITHCSDLLSINNRIVIILSISSTVTRILIMADYHSKATLLLEKIKYTL
RVVDIYQSSKEELTNIIKKLRNDRLTLRQYRSNLSTTDDEHIQLTNHIND
FIPSIKKFIIPASNHLRLLNQASNNIELDAIEQNLQHTLDKIEKVVSKLN
ETLTRDLSSLNGSQILILKSEAPKLYPEISAMEEQLLKLPTTVNTSLLQH
MENVNRKCLELYKLERVYQAKLAVITKPSHCNYYHQYRGTLSHFLIVNKI
KNKPSNLQMTLQLN Run BLAST on NCBI transcript from alignment at sc0001362:25135..26124 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035790 ID=TCONS_00035790|Name=TCONS_00035790|organism=Clytia hemisphaerica|type=transcript|length=990bp|location=Sequence derived from alignment at sc0001362:25135..26124 (Clytia hemisphaerica)
TCATCGATCACCCATTGTTCTGATTTGTTGTCGATCAACAACAGAATTGT
GATCATTCTATCAATATCGTCTACTGTAACTCGAATACTAATCATGGCAG
ACTATCACTCCAAAGCTACCCTACTACTGGAAAAGATCAAGTACACACTA
AGAGTCGTGGACATATACCAAAGCTCAAAAGAAGAGCTCACCAACATTAT
CAAAAAGCTGAGAAATGACCGTCTTACCTTACGACAATATCGATCAAACT
TGTCTACCACCGATGATGAACATATTCAGCTCACTAACCATATTAACGAT
TTCATCCCATCCatcaaaaagttcatcatcCCAGCCAGCAACCATCTTCG
TTTATTGAACCAAGCTAGCAACAACATAGAACTTGACGCTATCGAGCAAA
ACTTACAACACACCTTGGACAAAATTGAAAAGGTTGTGTCAAAACTCAAT
GAAACACTTACAAGAGATTTGAGTTCATTAAATGGTTCTCAAATTCTTAT
TCTTAAATCTGAGGCACCAAAATTGTATCCTGAAATAAGTGCAATGGAAG
AACAATTGCTGAAACTACCAACTACTGTCAATACATCACTTTTGCAACAT
ATGGAGAATGTCAATAGAAAATGTTTAGAACTTTATAAACTTGAACGTGT
CTACCAAGCCAAGTTGGCTGTGATAACCAAACCAAGTCATTGCAACTATT
ACCATCAATACCGGGGAACACTATCTCAttttttaatcgtgaacaagata
aaaaacaaaccatCAAACCTTCAGATGACACTCCAACTGAACTAGCATCA
GATGAAGTCATGCTCGCACCACTTGATGAATCTATCAACACGTCATGTCC
ATCAATTGCCTCCAGAGAGATACAGATATCCAAACACCCAGTTGAATCTA
TCCAAGTTATGATCATACTTAAACTAGTATCCAATGAAAATGAATCCATA
CACTGCAATGAATCCATTAATACATTATTGTCAATTGTCT Coding sequence (CDS) from alignment at sc0001362:25135..26124 >TCONS_00035790 ID=TCONS_00035790|Name=TCONS_00035790|organism=Clytia hemisphaerica|type=CDS|length=795bp|location=Sequence derived from alignment at sc0001362:25135..26124 (Clytia hemisphaerica)
TCATCGATCACCCATTGTTCTGATTTGTTGTCGATCAACAACAGAATTGT
GATCATTCTATCAATATCGTCTACTGTAACTCGAATACTAATCATGGCAG
ACTATCACTCCAAAGCTACCCTACTACTGGAAAAGATCAAGTACACACTA
AGAGTCGTGGACATATACCAAAGCTCAAAAGAAGAGCTCACCAACATTAT
CAAAAAGCTGAGAAATGACCGTCTTACCTTACGACAATATCGATCAAACT
TGTCTACCACCGATGATGAACATATTCAGCTCACTAACCATATTAACGAT
TTCATCCCATCCatcaaaaagttcatcatcCCAGCCAGCAACCATCTTCG
TTTATTGAACCAAGCTAGCAACAACATAGAACTTGACGCTATCGAGCAAA
ACTTACAACACACCTTGGACAAAATTGAAAAGGTTGTGTCAAAACTCAAT
GAAACACTTACAAGAGATTTGAGTTCATTAAATGGTTCTCAAATTCTTAT
TCTTAAATCTGAGGCACCAAAATTGTATCCTGAAATAAGTGCAATGGAAG
AACAATTGCTGAAACTACCAACTACTGTCAATACATCACTTTTGCAACAT
ATGGAGAATGTCAATAGAAAATGTTTAGAACTTTATAAACTTGAACGTGT
CTACCAAGCCAAGTTGGCTGTGATAACCAAACCAAGTCATTGCAACTATT
ACCATCAATACCGGGGAACACTATCTCAttttttaatcgtgaacaagata
aaaaacaaaccatCAAACCTTCAGATGACACTCCAACTGAACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035790-exon-sc0001362-1491911889:25135..26124 | TCONS_00035790-exon-sc0001362-1491911889:25135..26124 | Clytia hemisphaerica | exon |
| TCONS_00035790-exon-sc0001362-1510915933:25135..26124 | TCONS_00035790-exon-sc0001362-1510915933:25135..26124 | Clytia hemisphaerica | exon |
| TCONS_00035790-exon-sc0001362-1575043694:25135..26124 | TCONS_00035790-exon-sc0001362-1575043694:25135..26124 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001362 | supercontig | sc0001362:25135..26124 . |
Blast
The following BLAST results are available for this feature:
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