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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035388 ID=TCONS_00035388|Name=TCONS_00035388|organism=Clytia hemisphaerica|type=transcript|length=933bp
GTAAAAACGTGGAATTTACGTTATTTCTAAATCTTCCAAGCTATTGGGGA
TTTGATCTTTCAACAATAATGGAAAGTTACAAGAAAGGTTTGAAATCTGA
AATTCTTTCCAAACAGCTGAAAGTTCTAATTCCCACAAGTAATTAGAAGT
TATATAATTAGTGACAAGTTGTGTTTCTTGCTATTAAGGCTACTAATTTA
AGagtaaaattttgactaataaaatatttcataattatatGCTTTTACAT
CGATAAGTTAAAAGCCACTTAACCATGCATGtgatatggaaataaaatct
aaaGTACACAGTTTTCATAAGAATTACATAAATCCGGGAAagcctcaaat
ttttcaatttttaaaatatctttcatttaatCGTCAAAATTTTCTCTATT
CAACTACCAAGTATTGTCTCAAACGTGAGAAAAAGAGGAAGAAGGAAACA
AGAACTAATAATTTCAAAAGCCCAAGAATAATTCTAAGCCTTGTTTATTT
TATGAATGGAAGACAAATaaattttaactgaaaaatattttgagtctCAG
CATAATTCTTAAAACATAAAAGTTTGCAAATATTTGAGTCTtgcgattct
tataaaaaaattaatctaatcacaaataataatttgaaagaattaaaaat
ggTGAGGAAGAAAGCTTGAGAAATCAAATTCAGCTACCATAAACCAGATT
TTAACTTCATATATTGAGGgttacaatgtatagcaatgtgccctcccggt
tattaccataatagCTTAATGGCAATGATGGCTCTATATTGAgggttatt
tttttctaaaatgtttagaaaactctaaggttgcaaaaaaaatcattttc
aatcttGCCTGGACACTCTCAAAAAGCTTTAGAGTATAATGATAAATCAT
TTTGATGATCTAAAAtactaataaataaataat Run BLAST on NCBI transcript from alignment at sc0001306:32401..33333 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035388 ID=TCONS_00035388|Name=TCONS_00035388|organism=Clytia hemisphaerica|type=transcript|length=933bp|location=Sequence derived from alignment at sc0001306:32401..33333 (Clytia hemisphaerica)
attatttatttattagtaTTTTAGATCATCAAAATGATTTATCATTATAC
TCTAAAGCTTTTTGAGAGTGTCCAGGCaagattgaaaatgattttttttg
caaccttagagttttctaaacattttagaaaaaaataacccTCAATATAG
AGCCATCATTGCCATTAAGctattatggtaataaccgggagggcacattg
ctatacattgtaacCCTCAATATATGAAGTTAAAATCTGGTTTATGGTAG
CTGAATTTGATTTCTCAAGCTTTCTTCCTCAccatttttaattctttcaa
attattatttgtgattagattaatttttttataagaatcgcaAGACTCAA
ATATTTGCAAACTTTTATGTTTTAAGAATTATGCTGagactcaaaatatt
tttcagttaaaatttATTTGTCTTCCATTCATAAAATAAACAAGGCTTAG
AATTATTCTTGGGCTTTTGAAATTATTAGTTCTTGTTTCCTTCTTCCTCT
TTTTCTCACGTTTGAGACAATACTTGGTAGTTGAATAGAGAAAATTTTGA
CGattaaatgaaagatattttaaaaattgaaaaatttgaggctTTCCCGG
ATTTATGTAATTCTTATGAAAACTGTGTACtttagattttatttccatat
caCATGCATGGTTAAGTGGCTTTTAACTTATCGATGTAAAAGCatataat
tatgaaatattttattagtcaaaattttactCTTAAATTAGTAGCCTTAA
TAGCAAGAAACACAACTTGTCACTAATTATATAACTTCTAATTACTTGTG
GGAATTAGAACTTTCAGCTGTTTGGAAAGAATTTCAGATTTCAAACCTTT
CTTGTAACTTTCCATTATTGTTGAAAGATCAAATCCCCAATAGCTTGGAA
GATTTAGAAATAACGTAAATTCCACGTTTTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035388-exon-sc0001306-1491911889:32401..33333 | TCONS_00035388-exon-sc0001306-1491911889:32401..33333 | Clytia hemisphaerica | exon |
| TCONS_00035388-exon-sc0001306-1510915933:32401..33333 | TCONS_00035388-exon-sc0001306-1510915933:32401..33333 | Clytia hemisphaerica | exon |
| TCONS_00035388-exon-sc0001306-1575043694:32401..33333 | TCONS_00035388-exon-sc0001306-1575043694:32401..33333 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001306 | supercontig | sc0001306:32401..33333 . |
Blast
The following BLAST results are available for this feature:
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