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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035181 ID=TCONS_00035181|Name=TCONS_00035181|organism=Clytia hemisphaerica|type=transcript|length=1388bp
TTCCCGTCGAAGCTTTGGCCTAGGCTTCTATTATTCTCaaacgaaaaaaa
cttcttacaggaagtatatctatagggTCTGTGAATCAGCTATTGTTTTT
CCTCAACTAAATTAAACCCTAAGATCTTTCACCCGAAAAGTAAGGGACTT
GCGAAAAGGTACTATGtagaattttttcttatttaataCAAACTGTTATT
TATTTGCAAACTTTCTGTTTTCTAAgcttttttgattgttttaagaCAAC
CAaatactactttaggcgtacagacTCGCAGACTTTcactggcagaaact
ttcgcgattttcacgAATTCtattttagcccttttcgccaaggtaaatgt
ctttgaaaattcttgacaaaataaaaaaatctgtaaaacgtctaacttaa
aataaaatgtaagatttatgACACTTTTTAGCCTATTAAAGTCTCATAAG
TCAAAAGGACATAAGTTTCAATCCAGTTCTAGAAGTATAtgctcgcgaaa
gtaaatgttgtaaATTTCGTGATTCTTCGAAAACTTTGCACGCCTCAACA
AGTACGCAAGTATTCAATTGCAATCTTTCATTTTCGacaataaaactgaa
aatcagagaaagatAGTGAAGCACGTTTCTAAGAGCGTGGGAAATTTATA
TCACGTAATAAACAttggaatgtcttctttttcttttgaatgttgcaaaa
aaggagaaaaaaatgttgctcAGTGGCGGCTTATCTGATCTTCATAAATG
ACACTGCattatcttctttttctttgcaaaGAGCAGAACTGGGAGTGAGC
GCAATGAAATACGCTACAAAGTGTATTTCGATAAATGATGAGCTTGACAT
GAACAAATGtatcaaattcaaataaaaaatgataatcaaGCATCATCTGA
TTATGGTCATTTCTCCCCAACATGTTGCTAAATAGAGAAACCAAGagaaa
aggagtgagcctatAAAAGtcattttccactaaataagGACAAAGTACTG
AGACATGTAAAAAAGGGAaacatttctttctttaaaactttatttataAG
TAGATACCTGTATTGGACTCGCCCGTGGTGATGACGATCTTTAATATGTT
CGAGACGGGAGTTATTAAAGTCAGCGCTTatttatgaaaatcaaatttaa
gaaaTCTTTGGGCCTTTTTATCGATTATCTTTCCAAGATTCGAATTCGTA
TGTCGCATActccattttgtttttgagatACTGCTCATAATGGTCAAGCT
TAAATACTGCTGTGGTGAAGTGTCTATCTTGATTTGAAAATTGTCACTCG
ATTTGTCTTTTGAAATTCACTAACCATGTCAAACGAAAGCGGCGTAAATT
AACCCACATTTAAGGTAATTTTGAACAATATCTTTGAG Run BLAST on NCBI transcript from alignment at sc0001269:26729..28116 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035181 ID=TCONS_00035181|Name=TCONS_00035181|organism=Clytia hemisphaerica|type=transcript|length=1388bp|location=Sequence derived from alignment at sc0001269:26729..28116 (Clytia hemisphaerica)
CTCAAAGATATTGTTCAAAATTACCTTAAATGTGGGTTAATTTACGCCGC
TTTCGTTTGACATGGTTAGTGAATTTCAAAAGACAAATCGAGTGACAATT
TTCAAATCAAGATAGACACTTCACCACAGCAGTATTTAAGCTTGACCATT
ATGAGCAGTatctcaaaaacaaaatggagTATGCGACATACGAATTCGAA
TCTTGGAAAGATAATCGATAAAAAGGCCCAAAGAtttcttaaatttgatt
ttcataaatAAGCGCTGACTTTAATAACTCCCGTCTCGAACATATTAAAG
ATCGTCATCACCACGGGCGAGTCCAATACAGGTATCTACTtataaataaa
gttttaaagaaagaaatgttTCCCTTTTTTACATGTCTCAGTACTTTGTC
cttatttagtggaaaatgaCTTTTataggctcactccttttctCTTGGTT
TCTCTATTTAGCAACATGTTGGGGAGAAATGACCATAATCAGATGATGCt
tgattatcattttttatttgaatttgataCATTTGTTCATGTCAAGCTCA
TCATTTATCGAAATACACTTTGTAGCGTATTTCATTGCGCTCACTCCCAG
TTCTGCTCtttgcaaagaaaaagaagataatGCAGTGTCATTTATGAAGA
TCAGATAAGCCGCCACTgagcaacatttttttctccttttttgcaacatt
caaaagaaaaagaagacattccaaTGTTTATTACGTGATATAAATTTCCC
ACGCTCTTAGAAACGTGCTTCACTatctttctctgattttcagttttatt
gtCGAAAATGAAAGATTGCAATTGAATACTTGCGTACTTGTTGAGGCGTG
CAAAGTTTTCGAAGAATCACGAAATttacaacatttactttcgcgagcaT
ATACTTCTAGAACTGGATTGAAACTTATGTCCTTTTGACTTATGAGACTT
TAATAGGCTAAAAAGTGTcataaatcttacattttattttaagttagacg
ttttacagatttttttattttgtcaagaattttcaaagacatttaccttg
gcgaaaagggctaaaataGAATTcgtgaaaatcgcgaaagtttctgccag
tgAAAGTCTGCGAgtctgtacgcctaaagtagtattTGGTTGtcttaaaa
caatcaaaaaagcTTAGAAAACAGAAAGTTTGCAAATAAATAACAGTTTG
tattaaataagaaaaaattctaCATAGTACCTTTTCGCAAGTCCCTTACT
TTTCGGGTGAAAGATCTTAGGGTTTAATTTAGTTGAGGAAAAACAATAGC
TGATTCACAGAccctatagatatacttcctgtaagaagtttttttcgttt
GAGAATAATAGAAGCCTAGGCCAAAGCTTCGACGGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035181-exon-sc0001269-1491911889:26729..28116 | TCONS_00035181-exon-sc0001269-1491911889:26729..28116 | Clytia hemisphaerica | exon |
| TCONS_00035181-exon-sc0001269-1510915933:26729..28116 | TCONS_00035181-exon-sc0001269-1510915933:26729..28116 | Clytia hemisphaerica | exon |
| TCONS_00035181-exon-sc0001269-1575043694:26729..28116 | TCONS_00035181-exon-sc0001269-1575043694:26729..28116 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001269 | supercontig | sc0001269:26729..28116 . |
Blast
The following BLAST results are available for this feature:
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