TCONS_00034918 (transcript) - C. hemisphaerica

Overview
NameTCONS_00034918
Unique NameTCONS_00034918
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length783

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00034918 ID=TCONS_00034918|Name=TCONS_00034918|organism=Clytia hemisphaerica|type=transcript|length=783bp
taaagatGGTTTTTGATCCAACGAGCATTGATCTGACACCTGCATCGTAC
GCCTGTCCACACATGTCACACAACGCGTTTGTTTTGCGTCCGAACATTTC
TTCAACTTTGCATTATAACGACACTAAGGAAAATGAGaggcagAACTACG
CAATTAGTGATCATCTCCCAATGCCACAAGAAGGTCAAAGAGGCGTGGAC
GCACTTTCAAGAGCTGCTTTCAATAGCTTCCATAACAGAGATTATGCTAG
CTTTTCAACGTTCAGAAGTGCGCCGAATTTAGCTAACtacgcaaaattaa
gttccaaCAACCCAACAGTTGGTGACAGTGAGAGAACATACTCGCTTCCA
ACAAAATACGATTACTAGAAGTGATGGCGATATGTATGGTAAAAGGATAG
ACTAGTGTGTTTAGTACGCTTCAAAGCCAAccatataaattattttattt
tcatcactACGTACTCTTAGAACTGGAACTTATCCTATATAataaatacc
ttaagtggataaattttgacgtgaatttaacaaaattcgccaaattcgcc
aaatttaatccccgccaaaatttatccacttaaaggctctgaccatagtc
ggaaaatttattttagtatttgaacataaaagttttgttttaggttcttt
aacacttttaacaaagaattacctttataaatttctttttaaccctttaa
gtgccgatgtcgtatatatacgacatgggctatataggagggcgaagccc
tcctgtaatgcccagtttgagttagaaatcgtt
Run BLAST on NCBI

protein sequence of TCONS_00034918-protein

>TCONS_00034918-protein ID=TCONS_00034918-protein|Name=TCONS_00034918-protein|organism=Clytia hemisphaerica|type=polypeptide|length=121bp
KMVFDPTSIDLTPASYACPHMSHNAFVLRPNISSTLHYNDTKENERQNYA
ISDHLPMPQEGQRGVDALSRAAFNSFHNRDYASFSTFRSAPNLANYAKLS
SNNPTVGDSERTYSLPTKYDY
Run BLAST on NCBI

transcript from alignment at sc0001231:52851..70776+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00034918 ID=TCONS_00034918|Name=TCONS_00034918|organism=Clytia hemisphaerica|type=transcript|length=17926bp|location=Sequence derived from alignment at sc0001231:52851..70776+ (Clytia hemisphaerica)
taaagatGGTTTTTGATCCAACGAGCATTGATCTGACACCTGCATCGTAC
GCCTGTCCACACATGTCACACAACGCGTTTGTTTTGCGTCCGAACATTTC
TTCAACTTTGCATTATAACGACACTAAGGAAAATGAGGtatgatcattta
tttattcTTCCAACTTGATCATATAAAATTCCCTGAAATTTTGCTTTCCT
CTACAAAAATGTTGCGTCTCTTTGTATTAAAGTCTTCACGATTCGAAAAC
ACGcgggaaatttgttcgagttaaaataAAACTTGTTTATAGGGTTTGCT
ATCTTAAATCCGCTGATAAACCTGGAAGTTATTCGAGTTAAGGATACATA
TTCGAGCTATAGAGTTTCGAGTTCTGGAGACTCTACTGTGCTTGCTTACC
TTTCCCCAACTGCCTACCACCCATACAGCACATGGTGGACTGCAGATTTT
TTCTTGGATCGGCTTTGGGCGTTTCTTTTCACAGTGGCGGTGCAAGGTTT
CTTCCCCGCTCTCTTTTTGACAATTCACCGTTCTCGTTCGTATTCCATCA
CAGGTAGTCGATGAACACTAAAGAAAGGGTAAAGGTTGTGTATAAGGTTT
TGATCttcaaaagtcacttttaaaGGGGAAAGATAGTCCTCAGTCCCTGA
GCccgcttttttatgatttttctcaCGAGAAGATTTTTACCACATACAtc
cagtaaaataaaaaatgtgggGCATAAAGAATCTCTAAAGAATAATACAT
GATTTACTTTACTCACCTACAAAACATACAGTTAAATACTTTCGTACAAA
AGCGAAGCTCAATCAATTACCTCACTCCAATTTCCGATCTTCCAATCAGC
TATTACCGGACATTCTTTATTTCCACATAATATCGATCCGATTGGTTTCT
CGTCTGCCGGACATTTAGAGTCATCTAGCATTTTCAGTTCGGTCCGTGAA
ATACACATGACAGGCCTTGATCTAACGCCCCGTCCACACGTTGTTGTGCA
TTGTCCAAACTCTTCGGATTTAAACCAATAACCTTCGTATAGTTTCAAGG
CTTGTGGTCTATGGAGGAAGGAAATCAAATATCAAAGCCTAACTATTGAC
TAAAACATAAGATTAAAGCTAAGATGCGGCTTACGGCAGTAAAGAGTTAT
CGGTAATATCGGTGCTTTAAAGATTCTTTCATATCACGCATtgaagtata
agcccaaagggctagaatcgaatctccttggtagaaTTTGAAGCCTACCA
AATCCTGCTGAAGTTGCGTGGCCTAGCGCGGtgcgcctggtttttacaca
aatgacagatttaaactaaaaattgtgcttaaatttcgaaaaaaatacca
ctcgaaaacaaaggaatcgctagattcaatccgtggTCAAAAAttcggcg
catattttaaggcttcatttttttgccagagaaaggttagagattgaccc
ctagcccttcgggcttatacttcattgatatCACGAATGTTAGCCTCGGA
TTCTAGAAATTTAGTTTTCTAGTGACTGattcaaactagcttagatttct
aggctagctCAGTACATAGTTAAAGTCAAAGATCATAACGATAAATTTTA
AGTGAAGTAGATTTGGCTCATGGTGGTCAATGGCTACTATTTAAGTTATT
CATATTTTGAGCatatcaaaaacttttcattatAAGATAAGAAAGTGAAA
ATTCGCTTCCTCGAAGTTACCTTAGTATTGAAGCTTGGCAATGAATTCCA
TAGTTACAGGCTTTCtctaaatgaaattttgtgtatCCAGTACAAAATCT
TTCATTGACAAACTTCTCTTGAAGAATATCAAAACAACCGAATACTGCTT
TCTTTGAACCTGGAAATCAGAGATGAgtgaatttttattcatttttcaag
aCCTCTTGCATTTATCGTTGCTCTCACGTTTCTTATGTACTCAAAATACg
agttactctcgggtacctaatagccattttcccaaaaattaattagcggg
ggggggtgGAGTAGTGAGTAATTACAAAGATTGTGAAACTGTGTACTTGA
CTTTTCGGACAAAAAAGCAGGCTGAGTAGAAATTTTTCTAGCCCTGAATT
AGACCACTCTCCGTCTTTTCTACCCAATCAAGTCTTCCAATTTGCGACTT
TTTCTAATGTTTTTAGCTCAGGCTTTCGGACTCAAAACATTAGATGTTTT
GACGttactttaaacttttgaagctcttgcagtagGGAAAATCGAGTTTG
CGTCAggacacttgaaaggcttcgtTTTCtagaaaatcatcaaagttgAA
TTCACCAAGAAACGAGACGAAAATTCCGGTTTTTTGCGAGGTGCTCGTTA
ATATTCTTCAAACTTCGATTTAATTTGCCTTTAACCAAAGGTATACAATA
TGTCTAGCCTCGATTTACCTAATGACTTTATTTTAAAGGTATAGAATTTT
AAGATTTCTTAGGTACTTGCTGTTCCAAATGAGATATTTCTGAACATATT
TTACTGACCTCCTTGGCATGTTCTTGAGCAAGGTGTCCAGGACTGAAGTT
TCCACAAATGTTGACTCCATACAGAAGTGGTGAAAGGGATTAGAAACACT
TCGATAATCAACAAACTCCTTGAAAGCTAGAAATATGTAAATATCAATTC
TGTGAGCCCAAGTTGTAACAGATTGGGGAAATGGCAACCTTATTAAAAGC
CTCTGGGTCGATCAGACTTgataatttcttaggaaaagttcgttaaggtt
tttttttccttttttaaaattCTACCTTTGAAAGCAAGTTAGCAAGTGAG
TGCGTGTGCGCTAGATCCATCACATtgactttcaaaattaaatttattta
caaaGCAAATTGTAAGTCCTTCACGTCTTAAAGGGGTAGTAGAACTTCCA
ATAGAATAGAATCTTTTAGGGGTCTGAATACTGCCCTATTATGGGTCGGT
CTACCCAGCGCTACCCTGGTCTCTCTtgctgaaatattttcaaaagtaga
ATAAATCAAACCTTTTACCTTCCGAAACATAGTTTTATCAATTTTACTTC
TAGCtttaataaaaattgaattttctttaTCCTCAAAATTTTTAGTATCG
TCAATAAAAAATGACCACATTTTATCCTGTGAAAATTTACCACTTACCCC
CTGATTTTGACAGTCTTTTCGATGATTCTCTAGTTGTTAGCTTCATTTTT
CAGGGGGTTTATTCAATTTCAATGGCTGATATTTATTACACCGCATAGGT
TTTGAAacgtaaatgtttttaaataacttttttattaCATCTGTCATCAA
GTCGAGTTTCAGCTGATTTTTAttctcaaaacatttttttctgctTTAAG
CGTCATATGAATCAATTTGGCACAATTCCTTTTTTTGGTCCATTGAACCG
CTAAAATAAAGCCATGCCGATCCGTAAAGATTGGTTTTGTGAcccagatt
tttcttgtaaagaagtcccggggggggggtacttaggcaaaaatggatgc
tgGGTATGTACagataagggtcggtttttttcgcctttcaaagtctctct
aacgGGTTGCCAAAACCAGAAAGTTTtcaattagtctctctaagggtcgg
ttttcggaggttcCGTCCGCGCATACCCTCATTCACCTAGATTTGAGTTT
GAAACTCTCTCTGGGTTCTGGTCAccaaattttcgaattttccttTTCTT
ATTAGCTGGAATAAAGGCTGTTAGATTTTTAACAGGGTTGAAAAGAATTC
TTACAAAATATATAGCTCAAATATAgtagaaaatagcaaaaacgtCAGGC
ATTTACAGGCATATCTTTCGATTGAACAAATATTCCTTGAAAGATTCTCT
GCTTTGATTGTCTAAGACACTTCTTTCCGgatgggggtaaaaataaagga
ccaaaactcgatggggattgatattcccatatgtttttttatggctgggg
atttaaattccattgttttcgaggcagaaaattcagtggggatggaaaaa
atagcaaagcATTTTGCagtgattttcttatttgataattttcagcgTGG
ACAAAACTTTGAGTACAATtttcaccggggacgatattttgaccaactgt
tccagtgggaaggggtcccagttgGTCTATGGAAAAGGGGGTATTCTAAG
GTAGCAGATTAACTGACGTAAAAATTGTAATCTTAGCAGGATTGTAAaag
gagattttttttcaattttcatcttcgttttttaaaaaatttaaacaata
tacacgtttttcgactgaagtcgcgcggtcaggcgtgtgccattttatta
tatttaatttaccaccctaaacttgATCCGatccttttttaaactttttc
tattgtctttaggtgcgaaaaaagactgggacggttttagggtggttaAA
CGGACAAAATAATGCCCGCGCTGGAATTGGCGGCTACGGAAAGGTGTATT
CTCACaattagcgagcacctcaccaaaaaccgggatttttcattccgttt
cttggtgagttccacttcgatgattttccaaaaatagaagACTTTCAAAT
GTATTGAcgaaaattctattttttgctactgcaggagcttcaaaagttta
aagtgacgtcaaaaaaaagtttcttagtGGAATAGGCGTTAATTGCGTTG
GAAAAACGCGAGTGACGTCTAGtattagcctatactagacgccacccgcg
tttttttatgcaattaacgtctattccactttgcgactttttttaatgtt
ttgagcccgggttttcgggctctaaacattcgattttttgacgtcacttt
taattttcgaagctcctgcagtagcaaaatagTCGAATTTGCGTctggct
tctatttttcgaaaatcgtccaagtggaactcactaagaaacgagatgaa
aaatcccggtttttagtgagatGCTCGCTAGTCTAGTATAGGTTAACTCA
CGGTTATCTTttctaattaaaattcaaagggTATATTCGCATACGTATTT
ACTGACAGCTAATTTgacagctaatttgaaataaaccCCACACACTCCCA
TAGAAATCTGATTATGacataaaatttttatcaatgaatttcttttgttc
tgtAAAACGTGATCACAAAAATCAACTACAGTATGGTATTAAGTATATTA
GTAACAATTAAAAAATCATATCGTGTTAAATTTTccactatttttttctt
ttaaaacaagACAACTAAGACAAATCAAAAGACGCTCAAGATTAGCAGAT
TAATAACAAATTTCTCCTTATAAATTTCTACTCGTCTTCAATTTTGATTT
CGATGAATAGGCAATCATCTTTGACGAAGCCTTCATCAACTAACCGATCA
ATCTCAATAAACTTCGGTAATCCATGTGGCAAATTCATGTCATTGATTGG
TTTCTTAAAACACGGTGAATCTGCATCAGGGGTGATACATTCCACCAAAT
CATTGCAACGGTCTTGCTGGTTTATCAAACTGagttgaattttcttttga
aaaggcCACGTTTGGATATTATCATATTCAGACTTCATCAGTATGAAATA
TAACGACAAATAATCTCTTGCTCCGAGTCCATCACCGTCTGGATGGAGCC
TTAAACAGTACTTGTATCCATATTTATCCGTGAAGCAGGGTGCACTGTGT
AAGGCTTTAGTTACACCTGATTTAGCTTCTGTAAATCTTCGTTTCAAGCT
ATCAATTTTCCAAACAAAATGACCATTCGTCGTGCCACATTCAAAGAGTT
TGAATTGTAATTTTAATTGGTTATTCTCTGATTGGAGTCGTTTGATTTTA
CTCTCAAGCGCCTTGATTCGTACTTCTTGTCCTTGTTCTGTTGGGCTTCC
TAAACTCATAATCTTTGGAGACATATGGAATTTCTTCACAGTTGATTCCT
TGTGTCAAGTGGGCCAGTGTTTGTTCCAGAATGATCTACATGTAGAGGAA
AAAACCATATTAGAGTAGTTGTTTATTTGAACATATGATGAACATATGAC
ATGTGTCATTTTTGCTGTTCTTAAGCATCAGGATAAAAATATAATGAGGA
TAAAATAGAAATGTTTTCGATCCTCTGGCTTTCGTTTTGTCTCAAAACTA
TTTTATGATGAATCTAGGGAAATTGATTACTTGCTTGTTTTTGACACACC
TATGATGATCAGCTTATATAAAGTTAAGAAAAGTCTATTATCTCTAGCCT
TGAATGAAAATAGATTTATAGCAGATGATGATACAGGCGATGATCGTCAT
GGAATATTAACAAAAACGCTTATGAATGTTTTTTATTGTTGTGGGAAAAT
ACCACCCACATATAAacaattctttaggaaaaaTTACTCTAAATTGATTA
TCCTTCAAAATTTAGATCGAAAATATATGCAGATGGAATCACTATTTGAT
GACCAATAGTGATTGTGCGAAAAAAACAAAGTACCGATTGCCTATGTATT
TTTATGCCTATGCACATATGCTcgcttttttaaataagaatacactttat
aagaacccagctgacacacgacgtttttcaacgtttttctaacgttccca
acgtccatataacgttagatgaacgttgaaacaacgttgtgtgccagctg
ggaatgtCCATGGTGAAAATGGCCAACAAATTAAGAAtgtgctaagaata
tcaccatcatggaagtTTGCTACTCAaactaagaatgccatttttagagc
actttcaattataaattgtcaattacccccaagtaaggctcactcctttc
acaaaaatgccatcttatgcttgagacgtatgtactaaatgttNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNcgtatgtactaaatgttaaatctagtctg
aattaggaccctaacctaagaatatgctgtaagaatattttaggatgatt
ttcccaaaaaagttgagaataatcatgatgaaattgatttacaccattct
tattaaaaaaaaagcgtgtaaaaggCCTAGGCATGGAAATTACATGCTCG
ATTGAATAAATCCCAAATATTTCCATCAGAATTCAaagtatttctaaaat
ttgatgcATCACCGTTATATTATggtcacatttttttcattcaaaatgaa
aaggaaaaaattgcATAACAATTTATACAGTCAAGACATCattcgaaaag
aaaaacaaatgcaTATACTGTACCTCGTTTGATATCCTCAGCAGTTTCTA
GCAGTTTCTAGCAACGTTATTTTCGTGGAATAGTAATGTTATTTTATTAG
ATTGCACCATTTTTATAGGGGAcaatgggaaattcccttttgtcataagg
aaatttttgaattcatttGAGTGTATTTACAATGAGGTTTCCCTTTACAC
TGATCATTCATTGTATTTGTTATGATCAATAATTGATCTGTTCGTTTAGA
AAAGTCCCCTTGTCAAAGGGGAATAACCTAGAGGGGAAATATCTACTGAA
CACAAACATGTTGACAATGATAAGTTAACCTTTCCAACCTcacagtttta
ttttttatttaattttatgtACGTAGCTCACTTATTGTGTAGTGAATATA
AAAGATAGCCGAGTCACCAACAATTCATCCCCTTCTAATTCTATTTTGAC
CCATTTTCCAACAATTGCCAAGAAAATTCCCGTTTATAAATACAGTTAcg
gctctctaattcgatttttaaggggaatggattttcatcaaacaagggag
cgtatcgaattgTATAGCGTCGTTTATTAGATTTATTCtcgttgacggtg
actttcaatattatcgaataagggagtgtatcgaataatagaacgtcaaa
ttagagagtgtcaactgtagaTTTCTATTCTAAAGTACATCTCGACATAA
TGTTTTTATGCATTTctcaaagcctaaaaatatttcaagaggtCATAGAT
AGATGCGGAAGTTCTGTTGACAAAGCAGAGATGacaataaagattttttt
ttcaaaatctgtgcTTGTGCGGTACTGTAAGCTGAAAAaaagttcttcat
tttttttgaaaatgctgtgtaagAAATTTGTAGAAGATACGTTGATGGTT
TCGAGTTTCTTTAGGGGCGGTAAAACTTCTCTATCAAGAACCAAAAAGCT
TCAATAGGCTTGAGTCCCGAGAGACTTTCGTATCTTTAAAGAGACCCAAA
AGGGGAAAATTCTAACCCTTACAGAAACCTTACGTTGTTTTTGTATCCCT
TACAGAGGTAAAAAAGCCGACCCTTacaacaccccttctcacacaGACCC
AGTAAGTTGGGATAAATATTTAAAGccaaaattcgaatttttatttcatt
gttttcgggCCAGATTTGATTATTCTCAGTTGcgacaaaaataagaatat
aatcttccactagattcgatattttggccaatttttcaagtgggaagggg
tcccaatGGGTTAGGCTTCAGCTCATCCTCTAAGGAAAAGTCTCTTATAG
AAATATAGGAAGtgtatctatagaggtctgcgattcagactaccaaCGGG
TCTGCGAAAAGGGGTGTCTCTCAGAGGTAAAGAAACCGTCCCTTACCGTC
TGCACATGCTCAACACCTATTCTTCCtcaagtaccccccccccctgggac
tGAGTAAACCCACAGTATTTTTACTTTACCTTTATGAATGTATTTCACCG
CGAGCTTGGTTGATTCTTCAGTTTTTTGATCCCTCATATGGTCTGATCGA
TCAGCGTCTGACTTgaagttttacttttttgctcaTCTGGGCCAAAATTA
CTATCAGAGATTTACTATCAATATTCCAAAGTTTGTTCAACCCTGAATGT
GAAGTTTAAACTTGAATGCCTTGATTTATAACAAATTATGACTCTTGGAG
TCTTTTCGAGATCATTAATGTGTTGATATAATTAGGgcatttgaaatttt
tacatcttttaaGCTAACAGCAGGCACCTAAtaatgaaagaaagaaagga
aaataaaaatggaatagGAATAACCAGTTGCCAAATCTGATTAAATTCTT
GATAATCATGACACAATCCTCTATACAGAAATAAGCCATAGTCATCCGAA
CTTTGCTACAcgcacgctttttttataagattggtgttttttcatttcat
gatggatattcttaactttttggggaaaatatATTATTACGGTATATTCC
TAGATAAGGATCCAACCGAGTCTAAATCTAGCTTGTAATACATACCACGa
gccccggggggggtactacccttgtcgaccaacgggggtgctccgctgag
gttcgaaaaatggaccctacgtgggactcgaaatttgcgaaaaaagtgaN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcctgggactcgtggag
gttaaaaaaggtaccctgaccagcggagcatccccgtaacccatcttgcc
ctagtaccccccccgggccaCGAGCAAAGATattgcatttttgtgaaagc
ttTTAGCATTGCTGGAGGATAATTggaaatttacagaaaaaatgctctaa
aaatcggcattcttaggttcagttgccaaatcTCATGATGTtgttattct
tagcatattcctAATTTATTTGGCCAATTTTATCAtgtacattcttataa
agtatactcTTAAAAAACAACGCGTGTACTTTAAATTCTAACAATAATGT
TTGACAAATTCCGACTTGAATGAGGGATTTTCTAGTTCAGTTTTTTAAAA
CCCAAAGTTCAATTCGAAGTTCAATTGATTGTAAATTAATCTAAAGCTTT
GACATTGAGAAAATGTCCTTAATAAAATTCCCTTCCCTACAACCAATGAA
CTTTATTTTCAGTATTGGTCacgttttttttgttgttgtttgtatTCATT
ATATGGTCATCAAAAAGATGATGGGGCATGGGAAAACTCCAACTTCGATA
TATAGTATGAGTGGTGTTTCGGTAACTCATAAAACACGCAGaaatttagc
aaacagtgcaaaactgagcaggaaagtttatttttcgcgaaaaaaacttc
GCGTTTTTCAGATTTAATTtgttacctggcagaaactttcgcaaaaaagg
atcaaaatcgcgaaaaacgcgaaagtttctgcctcTAAAGTATCCAGATT
TGAATCCTTAATAATTCAGAAAGGTAGGGTGATTCTTATGATCAcataga
ctggcacgccagtcgggctggaacggtatcacgcgggaaaagtgagcgta
gtaagaaattttgtcggcggcaagggctgaaagcccttaatcagcagcct
ctcaccaacttttactcgttctcctacgcagctcctattctagcaaacgc
ctgtcgcctttatgttcccgccctctgacatgattaagtAACAGAatagt
ttgctagtctaatgATCACAACTCTACTTTAATAGGGTATTACATCTGGT
CAAAATCTTGTGATCAGTCACTAGTGGGGATAGAATGAAGGGACCAAATG
TCAATAGATTGGGAaaatctgtatttttataaaaacgcgATAGATAGGGT
TTTCGAAAATTACAACGGCTCAAATTTTGTTAATGAACGGTTTTTATCAA
CGCGAGGGTAAGCTATTCGTATTAATAGCCTGAGTAAGAAGTGTGATAAG
GTAGAATCTTTTGACAAGCTATTTCACTACAGCTAACCTGAAAACAGATC
TTGGTGAAAACTTGAAGAATAAGCACTAGAAAAGACTTGAAATCACAATA
AAGTAGTGTGATTGTCCGTATCAGAATATTTATGCCGTATCATATCATAC
CATCTATATTTAGGCTTAATCACAGCTATCTGTTATGTTcattaagcttt
tttcacatgtacgtaaaattttaagACCTTGAAGGGTGGGAATTCCCCTA
AacttacgtagtgttttaaaGCCTTGTGTAGAGTTTGCTTAcgctcaaaa
agttttgaatgaaaggaaaagtcacgtaagaccctcttaatcaacccttt
aactgccgttcgcattttttaaggttcgacctatttgccacgagaaaaaa
agaagattcgACCTATTTGCCTATTTTAAGACCTTGAAGGGTGGGAATTC
CCCTAAacttacgtagtgttttaaaGCCTTGTGTAGAGTTTGCTCAcgct
caaaaagttttgaatggaaggaaaagtcacgtaagaccctcttaatcaac
cctttaactgccgttcgcattttttaaggttcgacctatttgccacgagA
AAAAAAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNttttttcatttcaaaccatctaatacgaaatctttgtagaagt
gttaaatttggcggtaaaggaatggaaagtgcacatgtcggcaaatcccg
acatcggcaaagaaatcgaaaatgctcatgtcggcatatgccgacatcgg
cagttaaagggttaattaacaaaaactctacataatgtcggggaaattcc
caaaagacagccttacgaacgattttcTGTAAGGTCTAAAGGCCCCATTA
CACCTAAGAATAAGGGGGAAGAATATATCTCTGCAGCTGTTACGATTCGT
AAATTCTTGTTCTAGATACacgtaaaaatattcaaaaatggaANNNNNNN
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TTCTTGGATATTCTTGATTGATTGATACACGTGATGCAAAAATGCAGACA
TTATTTTATGGCTTGGTGTTTACTATTGCATTGGGAACATTAAAGTAGAT
CAAATCAAACAAATCTACAAATCTTTAAGGTTCCACTAGGATTTTATTTC
GCTTTTCTTACCGGGTCATGCTtctagtgtggtcgtgttacaaaaataca
ggctgtttgtaggaaaaaaataagatctagctgaaactttctccagacct
tctctataggatggttatgcttTTAAACGGTTAAGACTTTTAAACGGATT
TCCTTACctaaactcgagatatttcatgcgcaattTCCACTTTTCGCTAC
actttggtctaaaattgaccataaatagcatcttctgcgtaaattatctt
gagttaggtaatgaaatcggctatacccgtttaaaagtcttctatatagt
tttttgagagctttcgaatggtatacttgataatgtctgaaaatgagttt
gaaattttcaaaaattttgcccttatagggttttgcctggggaaaaaaga
aatgtccaaaaaaagggatgttccaccagtgggattttaggggatttttt
cctgaggcataaccatcctatagagaaggtctggagaaagtttcagctag
atcttatttttttcccgtaaattatgctaaacgaccctaCTATTCGGGAA
ATGTAATAAAAGAGTCGTAAAGGTGATGATATGATGTGGAATAAAGTTAT
CTGGTTATCGAAGCGAATTCGAAGTTAATTTTTCGCTCTCGAATTTCACT
ACGCAAGGGTAATTATAAATTTGCAGGGGAAATCAGAAATAacaaaaatt
tgtaaacaatttGACTATTGTAGAGCTTGTCCTCATGATCATATTTGTTT
AATTTCCCCCATCTTAAAACGTACTTTTAAAACTAACCTTAAATTTCGTA
CATAACGTTCTCTCTATACATATagaaaatgggattttttgaTGCAACGC
AACGGATTAGAGCTCACAGTTGATTAGATTTCCAGTATAAGAGGCAATAT
GTTTACTTAAGGAAatcaaacacaaagaaaattgtTAAAAGGAGGATCAT
CAAACAGACTTCGAGTGagtgtttttgattttgtggtGTTGTGTTTAAAA
AGCAAATTACCCTTAAATTCAGgtcttgattgattgattgattgattgat
tgattgattttcaTTAATAGGTCAACTGGCTCGAAAGTGGTTGTGGTAGC
ACCTTCATTCGACGATTTCAGCAATTACCTGTCGTCTACACACCAGAAGA
GTTATACAAACAAATTGATTTGTTATTTGCTATTATTGTACCTTTCTTCG
AGGGTCATTTTTCCATTAACAGAGATTGACAGAGGCTCACAAATACTTCG
ATTTAACTCAACCAATTTCGACGAGATAAAAGGACACTATGTCAACACAA
TTTTCGAAGCTATTTGCtaaatttttaaagaggcagAACTACGCAATTAG
TGATCATCTCCCAATGCCACAAGAAGGTCAAAGAGGCGTGGACGCACTTT
CAAGAGCTGCTTTCAATAGCTTCCATAACAGAGATTATGCTAGCTTTTCA
ACGTTCAGAAGTGCGCCGAATTTAGCTAACtacgcaaaattaagttccaa
CAACCCAACAGTTGGTGACAGTGAGAGAACATACTCGCTTCCAACAAAAT
ACGATTACTAGAAGTGATGGCGATATGTATGGTAAAAGGATAGACTAGTG
TGTTTAGTACGCTTCAAAGCCAAccatataaattattttattttcatcac
tACGTACTCTTAGAACTGGAACTTATCCTATATAataaataccttaagtg
gataaattttgacgtgaatttaacaaaattcgccaaattcgccaaattta
atccccgccaaaatttatccacttaaaggctctgaccatagtcggaaaat
ttattttagtatttgaacataaaagttttgttttaggttctttaacactt
ttaacaaagaattacctttataaatttctttttaaccctttaagtgccga
tgtcgtatatatacgacatgggctatataggagggcgaagccctcctgta
atgcccagtttgagttagaaatcgtt

Coding sequence (CDS) from alignment at sc0001231:52851..70776+

>TCONS_00034918 ID=TCONS_00034918|Name=TCONS_00034918|organism=Clytia hemisphaerica|type=CDS|length=732bp|location=Sequence derived from alignment at sc0001231:52851..70776+ (Clytia hemisphaerica)
aagatGGTTTTTGATCCAACGAGCATTGATCTGACACCTGCATCGTACGC
CTGTCCACACATGTCACACAACGCGTTTGTTTTGCGTCCGAACATTTCTT
CAACTTTGCATTATAACGACACTAAGGAAAATGAGaggcagAACTACGCA
ATTAGTGATCATCTCCCAATGCCACAAGAAGGTCAAAGAGGCGTGGACGC
ACTTTCAAGAGCTGCTTTCAATAGCTTCCATAACAGAGATTATGCTAGCT
TTTCAACGTTCAGAAGTGCGCCGAATTTAGCTAACtacgcaaaattaagt
tccaaCAACCCAACAGTTGGTGACAGTGAGAGAACATACTCGCTTCCAAC
AAAATACGATTACTAGaagatGGTTTTTGATCCAACGAGCATTGATCTGA
CACCTGCATCGTACGCCTGTCCACACATGTCACACAACGCGTTTGTTTTG
CGTCCGAACATTTCTTCAACTTTGCATTATAACGACACTAAGGAAAATGA
GaggcagAACTACGCAATTAGTGATCATCTCCCAATGCCACAAGAAGGTC
AAAGAGGCGTGGACGCACTTTCAAGAGCTGCTTTCAATAGCTTCCATAAC
AGAGATTATGCTAGCTTTTCAACGTTCAGAAGTGCGCCGAATTTAGCTAA
CtacgcaaaattaagttccaaCAACCCAACAGTTGGTGACAGTGAGAGAA
CATACTCGCTTCCAACAAAATACGATTACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020321XLOC_020321Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034918-proteinTCONS_00034918-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034918-exon-sc0001231-1491911889:52851..52987TCONS_00034918-exon-sc0001231-1491911889:52851..52987Clytia hemisphaericaexon
TCONS_00034918-exon-sc0001231-1510915933:52851..52987TCONS_00034918-exon-sc0001231-1510915933:52851..52987Clytia hemisphaericaexon
TCONS_00034918-exon-sc0001231-1575043694:52851..52987TCONS_00034918-exon-sc0001231-1575043694:52851..52987Clytia hemisphaericaexon
TCONS_00034918-exon-sc0001231-1491911889:70131..70776TCONS_00034918-exon-sc0001231-1491911889:70131..70776Clytia hemisphaericaexon
TCONS_00034918-exon-sc0001231-1510915933:70131..70776TCONS_00034918-exon-sc0001231-1510915933:70131..70776Clytia hemisphaericaexon
TCONS_00034918-exon-sc0001231-1575043694:70131..70776TCONS_00034918-exon-sc0001231-1575043694:70131..70776Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001231supercontigsc0001231:52851..70776 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.69838	5.97864	4.92843	6.81554	0.757311	1.57695	6.11883	7.43293	5.96257	16.6326	2.84756	4.4686	7.73316	6.40841	3.12456	2.67452	5.14417	5.08686	3.79222	11.3673	2.53275	2.46796	6.48854	5.97087	4.04011	10.1734	15.5864	12.4129	5.02088	4.39506
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00034918 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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