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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035364 ID=TCONS_00035364|Name=TCONS_00035364|organism=Clytia hemisphaerica|type=transcript|length=1508bp
GAAGTAACGAAGAGTACTCGTGTAAAATTTACCATACATCGTTTTTGATC
GGGGAATCAGGAAGCCGTACGCTTGGATTTACGCTCGAATCTCTCCCATT
GAATCTTCTACTTCGCTGGTTACTGGAAACTTCGATTTTATACACCTCAC
AGAAAGACACCTCATCACAGAAAGGAAAACTTGCATAATTTAATTATCAA
TTGGTGCTTTCCAAACCAGGCTTGCGTCAACATGAAACCTGACAATCAGA
GTCTTTACAACAGCAGCTATCATCATCGATCAATCAATATGCGAGATCGA
CATCATAATCCAAAGGAAAAACGCCCTAACTCCAAGTGGTACACCCTCAA
TTTTAACGCCCTCCCGTTGAAACTGGCCTACTTTATATACGGGTTACATC
GAATGTCATACAAACCCTTCTTAATCGTCTTTTTCAGTAGTATTGGGCTT
AACAAAGCTGAAGCAGGGCTCTTAGTCGGTCTTATGCCtttaggatcgat
catcgggaATCCGTTTTGGGGCATCGTTGCCGATAAAACTAAACGTCATC
GCACGATTTTAACGATTCAGTTTATAGGAGCTATCTTGTTGATGTCGTCG
CAACCGTTCATTGCGAAGTATCTCGGAGATCCGATCAAGAATACGTGTCC
CTTAAAGAAGACGTCGGACAGCTTCCGTGGTACTAATTCAGATCCGATTG
ACGAGCTTTTTCACTTACTGAATAATACTGGCGGCGGTAATCGGACTACA
CCTGTTTTCAACATGTCAGTAAGCAGAAATACCAGTGTTAATCCTTACTT
TAAATCAACTATCTTCAGAACTAATGTGACTGACTTTTATGAaggaaatt
cgatttttaataCACCTTTCAATACCAATAACTCCCTACCATCTCCGCTA
GCAGACAAAAACATCATTGAACCTCCAATGGAAACAGCTGAAGACAAAAG
TCACAGACAACTTTTATTTACAACTCTACTCATTTTCATTATCTTACAAG
ATTTTTTCCAAGGTAGTTATCTGTCATTTACCGATTCGGCTGTTATGCGG
TACATTGAACAGCAACCTTATATTATGGATTATGGTTTTCAACGTATGAT
CTCTGGTCCCGGCGCTGCACTTGGTGTACCGTTGGTCAACTTATGGTTAG
AGCTCATCAATACATTGAATTTGGATTTGAGTATTTCTTGCTACGTTGTA
ATGCATACTCAATACGTCATAGCTAGTATAATGTACTTAACCATTCTTGT
ATTCCTCTATGGTCGTATATCACCTACAGAACAAGGCTACGAATGTTTAG
ACCAAACTTCAAATGGCGCCCGACGTAAGCCAAACAATCAGAAAATCCAC
ATTGCTGTCTTCAAGAAATTAACCGAAGTCAAAGTCGTATTTTTACTGGT
AACTCTTCTACTAGCTGGTATCAGTTTGACCCTCTTCTCATCTTTCACTA
TGGCTTATATGATTGAACTTGGAGCTTCAAGGACTTTGTTATCTTTGGCG
TACTCCNC Run BLAST on NCBI protein sequence of TCONS_00035364-protein >TCONS_00035364-protein ID=TCONS_00035364-protein|Name=TCONS_00035364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
MKPDNQSLYNSSYHHRSINMRDRHHNPKEKRPNSKWYTLNFNALPLKLAY
FIYGLHRMSYKPFLIVFFSSIGLNKAEAGLLVGLMPLGSIIGNPFWGIVA
DKTKRHRTILTIQFIGAILLMSSQPFIAKYLGDPIKNTCPLKKTSDSFRG
TNSDPIDELFHLLNNTGGGNRTTPVFNMSVSRNTSVNPYFKSTIFRTNVT
DFYEGNSIFNTPFNTNNSLPSPLADKNIIEPPMETAEDKSHRQLLFTTLL
IFIILQDFFQGSYLSFTDSAVMRYIEQQPYIMDYGFQRMISGPGAALGVP
LVNLWLELINTLNLDLSISCYVVMHTQYVIASIMYLTILVFLYGRISPTE
QGYECLDQTSNGARRKPNNQKIHIAVFKKLTEVKVVFLLVTLLLAGISLT
LFSSFTMAYMIELGASRTLLSLAYS Run BLAST on NCBI transcript from alignment at sc0001302:45715..47222 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035364 ID=TCONS_00035364|Name=TCONS_00035364|organism=Clytia hemisphaerica|type=transcript|length=1508bp|location=Sequence derived from alignment at sc0001302:45715..47222 (Clytia hemisphaerica)
GNGGAGTACGCCAAAGATAACAAAGTCCTTGAAGCTCCAAGTTCAATCAT
ATAAGCCATAGTGAAAGATGAGAAGAGGGTCAAACTGATACCAGCTAGTA
GAAGAGTTACCAGTAAAAATACGACTTTGACTTCGGTTAATTTCTTGAAG
ACAGCAATGTGGATTTTCTGATTGTTTGGCTTACGTCGGGCGCCATTTGA
AGTTTGGTCTAAACATTCGTAGCCTTGTTCTGTAGGTGATATACGACCAT
AGAGGAATACAAGAATGGTTAAGTACATTATACTAGCTATGACGTATTGA
GTATGCATTACAACGTAGCAAGAAATACTCAAATCCAAATTCAATGTATT
GATGAGCTCTAACCATAAGTTGACCAACGGTACACCAAGTGCAGCGCCGG
GACCAGAGATCATACGTTGAAAACCATAATCCATAATATAAGGTTGCTGT
TCAATGTACCGCATAACAGCCGAATCGGTAAATGACAGATAACTACCTTG
GAAAAAATCTTGTAAGATAATGAAAATGAGTAGAGTTGTAAATAAAAGTT
GTCTGTGACTTTTGTCTTCAGCTGTTTCCATTGGAGGTTCAATGATGTTT
TTGTCTGCTAGCGGAGATGGTAGGGAGTTATTGGTATTGAAAGGTGtatt
aaaaatcgaatttcctTCATAAAAGTCAGTCACATTAGTTCTGAAGATAG
TTGATTTAAAGTAAGGATTAACACTGGTATTTCTGCTTACTGACATGTTG
AAAACAGGTGTAGTCCGATTACCGCCGCCAGTATTATTCAGTAAGTGAAA
AAGCTCGTCAATCGGATCTGAATTAGTACCACGGAAGCTGTCCGACGTCT
TCTTTAAGGGACACGTATTCTTGATCGGATCTCCGAGATACTTCGCAATG
AACGGTTGCGACGACATCAACAAGATAGCTCCTATAAACTGAATCGTTAA
AATCGTGCGATGACGTTTAGTTTTATCGGCAACGATGCCCCAAAACGGAT
tcccgatgatcgatcctaaaGGCATAAGACCGACTAAGAGCCCTGCTTCA
GCTTTGTTAAGCCCAATACTACTGAAAAAGACGATTAAGAAGGGTTTGTA
TGACATTCGATGTAACCCGTATATAAAGTAGGCCAGTTTCAACGGGAGGG
CGTTAAAATTGAGGGTGTACCACTTGGAGTTAGGGCGTTTTTCCTTTGGA
TTATGATGTCGATCTCGCATATTGATTGATCGATGATGATAGCTGCTGTT
GTAAAGACTCTGATTGTCAGGTTTCATGTTGACGCAAGCCTGGTTTGGAA
AGCACCAATTGATAATTAAATTATGCAAGTTTTCCTTTCTGTGATGAGGT
GTCTTTCTGTGAGGTGTATAAAATCGAAGTTTCCAGTAACCAGCGAAGTA
GAAGATTCAATGGGAGAGATTCGAGCGTAAATCCAAGCGTACGGCTTCCT
GATTCCCCGATCAAAAACGATGTATGGTAAATTTTACACGAGTACTCTTC
GTTACTTC Coding sequence (CDS) from alignment at sc0001302:45715..47222 >TCONS_00035364 ID=TCONS_00035364|Name=TCONS_00035364|organism=Clytia hemisphaerica|type=CDS|length=1275bp|location=Sequence derived from alignment at sc0001302:45715..47222 (Clytia hemisphaerica)
GGAGTACGCCAAAGATAACAAAGTCCTTGAAGCTCCAAGTTCAATCATAT
AAGCCATAGTGAAAGATGAGAAGAGGGTCAAACTGATACCAGCTAGTAGA
AGAGTTACCAGTAAAAATACGACTTTGACTTCGGTTAATTTCTTGAAGAC
AGCAATGTGGATTTTCTGATTGTTTGGCTTACGTCGGGCGCCATTTGAAG
TTTGGTCTAAACATTCGTAGCCTTGTTCTGTAGGTGATATACGACCATAG
AGGAATACAAGAATGGTTAAGTACATTATACTAGCTATGACGTATTGAGT
ATGCATTACAACGTAGCAAGAAATACTCAAATCCAAATTCAATGTATTGA
TGAGCTCTAACCATAAGTTGACCAACGGTACACCAAGTGCAGCGCCGGGA
CCAGAGATCATACGTTGAAAACCATAATCCATAATATAAGGTTGCTGTTC
AATGTACCGCATAACAGCCGAATCGGTAAATGACAGATAACTACCTTGGA
AAAAATCTTGTAAGATAATGAAAATGAGTAGAGTTGTAAATAAAAGTTGT
CTGTGACTTTTGTCTTCAGCTGTTTCCATTGGAGGTTCAATGATGTTTTT
GTCTGCTAGCGGAGATGGTAGGGAGTTATTGGTATTGAAAGGTGtattaa
aaatcgaatttcctTCATAAAAGTCAGTCACATTAGTTCTGAAGATAGTT
GATTTAAAGTAAGGATTAACACTGGTATTTCTGCTTACTGACATGTTGAA
AACAGGTGTAGTCCGATTACCGCCGCCAGTATTATTCAGTAAGTGAAAAA
GCTCGTCAATCGGATCTGAATTAGTACCACGGAAGCTGTCCGACGTCTTC
TTTAAGGGACACGTATTCTTGATCGGATCTCCGAGATACTTCGCAATGAA
CGGTTGCGACGACATCAACAAGATAGCTCCTATAAACTGAATCGTTAAAA
TCGTGCGATGACGTTTAGTTTTATCGGCAACGATGCCCCAAAACGGATtc
ccgatgatcgatcctaaaGGCATAAGACCGACTAAGAGCCCTGCTTCAGC
TTTGTTAAGCCCAATACTACTGAAAAAGACGATTAAGAAGGGTTTGTATG
ACATTCGATGTAACCCGTATATAAAGTAGGCCAGTTTCAACGGGAGGGCG
TTAAAATTGAGGGTGTACCACTTGGAGTTAGGGCGTTTTTCCTTTGGATT
ATGATGTCGATCTCGCATATTGATTGATCGATGATGATAGCTGCTGTTGT
AAAGACTCTGATTGTCAGGTTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035364-exon-sc0001302-1491911889:45715..47222 | TCONS_00035364-exon-sc0001302-1491911889:45715..47222 | Clytia hemisphaerica | exon |
| TCONS_00035364-exon-sc0001302-1510915933:45715..47222 | TCONS_00035364-exon-sc0001302-1510915933:45715..47222 | Clytia hemisphaerica | exon |
| TCONS_00035364-exon-sc0001302-1575043694:45715..47222 | TCONS_00035364-exon-sc0001302-1575043694:45715..47222 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001302 | supercontig | sc0001302:45715..47222 . |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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