TCONS_00030616 (transcript) - C. hemisphaerica

Overview
NameTCONS_00030616
Unique NameTCONS_00030616
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length676

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00030616 ID=TCONS_00030616|Name=TCONS_00030616|organism=Clytia hemisphaerica|type=transcript|length=676bp
TAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAACTCCATGC
CATGGAGATTAAATTATGAACTCTATGCCGAGCCGAAGATGGAAAATACT
CCATCCCTCACAAAAGAAACGGAAACAAACACAGCCACGGAAACCAATAT
ACCATCAGTACAGCCAACTACATTGCAAGCTGATCAGGAAAATGCAATAA
CCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATACGATTAAG
ATTGAAGATGACAACCaagatgaagaaaatgataTTGTGCCACCTACCCC
ACTTAAAAAGAATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAA
GTGAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAGGATA
CTGACAAAAGATGTCATGAGAAATCAAATCGTCAGCTGTGAAGACATAGT
CAAAGCTGCGATTAAACAACCAGACTACAAGTTCAACATGTCCCCAATTA
CAATAgaagattattttcaaaatgcaaGTACATCCATGACAATGaagaaa
tattttcgaaatcCAAGTACATTTCCAAAAGCATCAAGTTATCTCATATC
AAATGGACTTGCTCTcgtaagaaaaaaaagatttacaaaggaagatttga
aaacagaTGAAGAAAATTACGAAGag
Run BLAST on NCBI

protein sequence of TCONS_00030616-protein

>TCONS_00030616-protein ID=TCONS_00030616-protein|Name=TCONS_00030616-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
RYDYNFGSSQVDTNSMPWRLNYELYAEPKMENTPSLTKETETNTATETNI
PSVQPTTLQADQENAITKVHFDVVYRLSNNTIKIEDDNQDEENDIVPPTP
LKKNEVYKESIIQSSLSESSAQLTLTNSSPPRILTKDVMRNQIVSCEDIV
KAAIKQPDYKFNMSPITIEDYFQNASTSMTMKKYFRNPSTFPKASSYLIS
NGLALVRKKRFTKEDLKTDEENYEE
Run BLAST on NCBI

transcript from alignment at sc0000832:104022..108738-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00030616 ID=TCONS_00030616|Name=TCONS_00030616|organism=Clytia hemisphaerica|type=transcript|length=4717bp|location=Sequence derived from alignment at sc0000832:104022..108738- (Clytia hemisphaerica)
TAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAACTCCATGC
CATGGAGATTAAATTATGTAAGTTTAAATTTTAATAAAAGATATTTTTCT
TTTTAAAAAATATAGTACGACAGCAGCCCTGGCAATTCAAATTTGTTTGC
CTCGGCATTTTTTTGCCGAAGCAAAAGGTTAAATTTGCTATTTGCCTCCG
CAGAATAGGATTCTGCCTCGGCAATTTTTACTCACGGAGAGGGGACATCT
CTGCTTCAACAGTTATCTATTTTTCTTAGAAATTTTTGCCTCGACATTTT
TTTGGCCGAGGCAAACACACTATAAACTAATTTGCCTCAGCTTTTACCTC
GGCATTTGCCGTATGCCGACGCCAATTGCCAGGACTGGACAGGAGCAAAA
ATAATACAATTTTCGAATTGAAATTGCAACCTACTTGATTAGTCTGACCA
AATTGTAAAATTAAAAAAGCTAATTTGCAAAGATTTACCAACTAGCATAA
TATGTGAAAAGCCCAGAAAAGCCATCTTTGAAGTCAAATATCTTCAAATC
AGTACAGAATTTGGCCATACTTTATACTTGCTTAAAAGAGTTCTATTTAC
TTTTTTGGAGAGCTTACATGTGGTATAGATTATTTTTGTTAGAAATGGTT
TTAAACGTTTTTTTTAGCCTCTGAAAATGTTTTTCCTAAGAGCCTCAAGC
CTCCCTATGTTAATCTAAATAAAATTTTGATATTGTCTAGTATATACCTT
AAGTGGAGAAATTTTGGCGCAGATTTAATTTGGCGCACAGCGGATTTGAA
ATATTTGGCGCGGATTTAATTTGGCGCAGCAAGGATTTTTTTTAATTTGG
TGCATACAAAAGTTTTTCAGACCTTAGCCAGTCATGCCAGCTGTCATGAC
AAGGCTGATAAGAAAAATAATAACGGCAATATGACCATTGACTAGATATT
TCGTATTTTATTGATTTCGTTGGTAAAAGTTTAGAAAAAAACTTAATATT
CGTTTAAAATTTACTTTTTCGTAATAAAAAAAAAATTGAATTTGGCGGTT
TTTGGTATTTTGCGCCAATTGCGCCAAATTTTCTCTGCGCCAAAATTTCT
CCACTTAAGGTAACCTAAGACCTAANCTTGGCGCGTATTTAATTTGGCGC
AGCTTAAAAAAAACTTGAATTTGGCGGTTTTTGGTATTTTGCGCCAATTG
CGCCAAATTTTCTCTGCGCCAAAATTCCTCCACTTAAGGTAACCTAAGAC
CTAGGGCCTTAGAAAACAACCAAAGTGATTTGCACTGTTGCTCACTGAAG
AAGAAAGGTGATCTTTGTTCCATGGGATATGGCTACCTCGCACAAAATCC
TTCTTTGAGTCAGTTTTGTAATTTTTTAAATTAATTAACTTAGCCCTGTA
TGGTAATTTACATAATTCTACAACTTTAAATTGTCAAATGTTTTTGATTC
CACAGAAGAGTACACACAGAAACATTTGGAAATTTATATCAGTTGTCCAC
TTCAACTTTGGGAAATGTAAAAAAAGCAAGAAGTGTGTTTTGCAATGCTC
TTACCAGGCAACCAGAAAAATAACTAATAAAGTGATTTTTAAAGAAAGAT
TGTGATTAAATTTCTTTTCACTTTTAGGAACTCTATGCCGAGCCGAAGAT
GGAAAATACTCCATCCCTCACAAAAGAAACGGTAACAATTGTTTTAAAAT
CTGACTGGAACTCTCCATCCTGTTGGATCTCCATATCATTTTAAAAACTT
AAAAGTAAATTGTGCATATACAATGCAATTACAGGTGAAGGTTGGATTCA
AATGAATAAATTAAGTTCTCTATAATGTTCATAAGTTGAATTAAAATATT
TTGTAGATTTCTTTATTTTTAGTATACCCTATAATTTAATAGTGATTCTT
TATCTTCGTCAAGGAAACAAACACAGCCACGGAAACCAATATACCATCAG
TACAGCCAACTACATTGCAAGCTGATCAGGTACAAGAATATTTGTGATTA
TTATCTTCAAAAAGAAAATCTTAGTACTTCCAAGAACCAAAATATTTGGT
ATAGAGATCCTGTAATGTCCTGTACTGTAGGGTAATAATTAGAATTCAAT
TAATATAAACTTGAACAAGGGTCTTTAGTTCTTGGATAATGTAGTAAGAT
TTGACTAGTCTTTTATTATTATCGTTAGGTCATCTAATAAAGTTATTGTT
CCAGATCTGCGGCCGGGTGAAAACTTTTTTACAAGTCAATCGGTCGGTTG
GTCGGTGTTAAAAAGTATTTATTGGATTGTAAAAAGTCTGACAACCATGC
TTAATTTCAACAAAAATCATATGTTTAATTTGCTTGTTTCTAAAGATTGA
TTACATTACTAAAGAGACTGATTTAACTAGAGAAACTAAAATACGGCAAT
TGAGCTTGAATTTTACAAAAAAAAATATTGATCGCCTGGGTGGAAGAAAT
TTTTCTCACCTAATTTTCTACAGATGGCCTTATCCAGGTAAGTCCCCTAA
TTCTATGACTTCCAAATCAATAAGTATGTAATTATCTTCACTTAGGAAAA
TGCAATAACCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATA
CGATTAAGATTGAAGATGACAACCAAGATGAAGAAAATGATATTGTGCCA
CCTACCCCACTTAAAAAGGTACATATGAGACAAAAGGCTCTCCATATAAT
TTCCCCAATGTTCACTCTAGCAAAGACTCACCTAAGAATTTAAGTCCTCG
CTAAACCATATTCCCACCTGGAATCCAATAGCTTTTAAAATCCCATCTGA
AGACAGATTATCTAACTTAGCAATTCCCTCACCGCCAATGTATTGTTTTT
AGAATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAAGGTAGGCA
AAATTAATTATAAGATGATACTGCAAAACCATTCATGAAACAACTTGTGT
GTCGTTTTTCGCTAGTTCGGACTCTTGCCAAAGATATAGAAGAGGGTTAT
GCAACTCATTATATGCAAACCTGGAATAATAATATGTTCGAATGAGTTGA
TAAGGAATAGATTAATGTTATAATTCATTCATTTATTTATTTCGTTTAGT
GAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAGGTATAC
AAAGTTGAAAAGACAAGTCATTTCAAACAAGCGAAGCTGAGTCTATTGGC
TTCAAGTGCTTTACACCCTCTGTTTGGGATAATGAGCTTTTTATATCTGA
GAGACATGCACGCTAACTTTATTCTTATAAAGTAGAAGTATGTAACAATG
AAAACTTTTCAGGTTTTTTATTTGTCTCTATTGCTGTAATGATGAACACT
TATTTGGATTATAATATTGTTCTTTACTCAGGATACTGACAAAAGATGTC
ATGAGAAATCAAATCGTCAGCTGTGAAGACATAGTCAAAGCTGCGATTAA
ACAACCAGACTACAAGTAAATATTTTATGTTGATATACACAATTTTTGAT
ACCATAAACAAACTAATTTTGGCAGATTTTCCAAATTAAGTTCCCGCCAG
ATTTAATATTTTCCGCCATTTTATGGTTAAAATTTTCAGCAATTACCAAA
TTAAATTCATGCCGAAACTAGTTCCTTTAAGTGATATACCTTATTAAGGG
AAGGGAATTTTGCGGGAAGAAATTTTTGCGGCATTTAATTTTGCGGTTTA
GACCTTGCAAATTAAATATTTCGCGGAAATTAATTTTACGGTTGAGGGCA
TTTTTAGTCCAAATTATAACCTAATTTGGCCTAAAAGTGCCAATTTTAGG
AGTAAAATTTCAAAATTCAAGATTCAATGTGTTTCGCAGAATTTAATTTC
ACGGTTGTCACCGGGAAAATTAAATGCCGCAAAAATTTCTTCCCTTAAGG
TACCCTAGCTTCTATAAGAGTATTCGGGTTAAAATTGCCCAAATTGTGAG
AATTATTATATTCCCAGGAGAATTTTTATCAACCACAAAACTAATATATT
TATTGATATGCAATAACTTTGAATTCGAAAATGAGAATGCGATGGCTGGA
ACACAATACTGTAGTATAAAATAATATCAACTTGAAATACTACCACATTC
TTCTTTTAGGTTCAACATGTCCCCAATTACAATAGAAGATTATTTTCAAA
ATGCAAGTACATCCATGACAATGAAGAAATATTTTCGAAATCCAAGTACA
TTTCCAAAAGCATCAAGGTTTTTATTCATGATTTAATATTACAGTTTCTT
AGTCTGAACCACTTTTTTTGAGGGGATTATTTCCATAACTTATGTAAAAT
ATTGAGACACTTTTGTACACAATCAGTTATTTCCTGGTATTTTTGTCAAT
CATGATTCTTGTTTTTACATAAGCGTGATAAAACATAACTACATATTAAA
GAACATTATGAAGTAGGAAAAATAATTTATTTTCTCAGTTATCTCATATC
AAATGGACTTGCTCTCGTAAGAAAAAAAAGATTTACAAAGGTATTATATT
TTTTCAGAAATTATTTGCAATTTTGATGAGATTTTGTAGCAACTTTATAC
GCTAATTTTGCTTAGACAGATCAAGTTTAAGGCGTAATTATTTTGTAAAC
TGATGTCACAGAAAGGCTTTGTTTTGTTCTGTTTTTTTCTTTTCTATTTA
TCAATTTTTGTTCATGCTTATTATTTTTCAGGAAGATTTGAAAACAGATG
AAGAAAATTACGAAGAG

Coding sequence (CDS) from alignment at sc0000832:104022..108738-

>TCONS_00030616 ID=TCONS_00030616|Name=TCONS_00030616|organism=Clytia hemisphaerica|type=CDS|length=6750bp|location=Sequence derived from alignment at sc0000832:104022..108738- (Clytia hemisphaerica)
GAAGATTTGAAAACAGATGAAGAAAATTACGAAGAGTTATCTCATATCAA
ATGGACTTGCTCTCGTAAGAAAAAAAAGATTTACAAAGGTTCAACATGTC
CCCAATTACAATAGAAGATTATTTTCAAAATGCAAGTACATCCATGACAA
TGAAGAAATATTTTCGAAATCCAAGTACATTTCCAAAAGCATCAAGGATA
CTGACAAAAGATGTCATGAGAAATCAAATCGTCAGCTGTGAAGACATAGT
CAAAGCTGCGATTAAACAACCAGACTACAATGAAAGCAGCGCACAATTGA
CTTTAACCAACAGCTCACCTCCAAGAATGAAGTGTATAAAGAAAGCATCA
TTCAATCAAGTTTAAGGAAAATGCAATAACCAAAGTTCATTTTGATGTGG
TTTATCGATTATCAAACAATACGATTAAGATTGAAGATGACAACCAAGAT
GAAGAAAATGATATTGTGCCACCTACCCCACTTAAAAAGGAAACAAACAC
AGCCACGGAAACCAATATACCATCAGTACAGCCAACTACATTGCAAGCTG
ATCAGGAACTCTATGCCGAGCCGAAGATGGAAAATACTCCATCCCTCACA
AAAGAAACGAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAA
CTCCATGCCATGGAGATTAAATTATGAAGATTTGAAAACAGATGAAGAAA
ATTACGAAGAGTTATCTCATATCAAATGGACTTGCTCTCGTAAGAAAAAA
AAGATTTACAAAGGTTCAACATGTCCCCAATTACAATAGAAGATTATTTT
CAAAATGCAAGTACATCCATGACAATGAAGAAATATTTTCGAAATCCAAG
TACATTTCCAAAAGCATCAAGGATACTGACAAAAGATGTCATGAGAAATC
AAATCGTCAGCTGTGAAGACATAGTCAAAGCTGCGATTAAACAACCAGAC
TACAATGAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAG
AATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAAGGAAAATGCA
ATAACCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATACGAT
TAAGATTGAAGATGACAACCAAGATGAAGAAAATGATATTGTGCCACCTA
CCCCACTTAAAAAGGAAACAAACACAGCCACGGAAACCAATATACCATCA
GTACAGCCAACTACATTGCAAGCTGATCAGGAACTCTATGCCGAGCCGAA
GATGGAAAATACTCCATCCCTCACAAAAGAAACGAGATATGACTATAATT
TTGGTTCCAGTCAGGTAGATACCAACTCCATGCCATGGAGATTAAATTAT
GAAGATTTGAAAACAGATGAAGAAAATTACGAAGAGTTATCTCATATCAA
ATGGACTTGCTCTCGTAAGAAAAAAAAGATTTACAAAGGTTCAACATGTC
CCCAATTACAATAGAAGATTATTTTCAAAATGCAAGTACATCCATGACAA
TGAAGAAATATTTTCGAAATCCAAGTACATTTCCAAAAGCATCAAGGATA
CTGACAAAAGATGTCATGAGAAATCAAATCGTCAGCTGTGAAGACATAGT
CAAAGCTGCGATTAAACAACCAGACTACAATGAAAGCAGCGCACAATTGA
CTTTAACCAACAGCTCACCTCCAAGAATGAAGTGTATAAAGAAAGCATCA
TTCAATCAAGTTTAAGGAAAATGCAATAACCAAAGTTCATTTTGATGTGG
TTTATCGATTATCAAACAATACGATTAAGATTGAAGATGACAACCAAGAT
GAAGAAAATGATATTGTGCCACCTACCCCACTTAAAAAGGAAACAAACAC
AGCCACGGAAACCAATATACCATCAGTACAGCCAACTACATTGCAAGCTG
ATCAGGAACTCTATGCCGAGCCGAAGATGGAAAATACTCCATCCCTCACA
AAAGAAACGAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAA
CTCCATGCCATGGAGATTAAATTATGAAGATTTGAAAACAGATGAAGAAA
ATTACGAAGAGTTATCTCATATCAAATGGACTTGCTCTCGTAAGAAAAAA
AAGATTTACAAAGGTTCAACATGTCCCCAATTACAATAGAAGATTATTTT
CAAAATGCAAGTACATCCATGACAATGAAGAAATATTTTCGAAATCCAAG
TACATTTCCAAAAGCATCAAGGATACTGACAAAAGATGTCATGAGAAATC
AAATCGTCAGCTGTGAAGACATAGTCAAAGCTGCGATTAAACAACCAGAC
TACAATGAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAG
AATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAAGGAAAATGCA
ATAACCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATACGAT
TAAGATTGAAGATGACAACCAAGATGAAGAAAATGATATTGTGCCACCTA
CCCCACTTAAAAAGGAAACAAACACAGCCACGGAAACCAATATACCATCA
GTACAGCCAACTACATTGCAAGCTGATCAGGAACTCTATGCCGAGCCGAA
GATGGAAAATACTCCATCCCTCACAAAAGAAACGAGATATGACTATAATT
TTGGTTCCAGTCAGGTAGATACCAACTCCATGCCATGGAGATTAAATTAT
GAAGATTTGAAAACAGATGAAGAAAATTACGAAGAGTTATCTCATATCAA
ATGGACTTGCTCTCGTAAGAAAAAAAAGATTTACAAAGGTTCAACATGTC
CCCAATTACAATAGAAGATTATTTTCAAAATGCAAGTACATCCATGACAA
TGAAGAAATATTTTCGAAATCCAAGTACATTTCCAAAAGCATCAAGGATA
CTGACAAAAGATGTCATGAGAAATCAAATCGTCAGCTGTGAAGACATAGT
CAAAGCTGCGATTAAACAACCAGACTACAATGAAAGCAGCGCACAATTGA
CTTTAACCAACAGCTCACCTCCAAGAATGAAGTGTATAAAGAAAGCATCA
TTCAATCAAGTTTAAGGAAAATGCAATAACCAAAGTTCATTTTGATGTGG
TTTATCGATTATCAAACAATACGATTAAGATTGAAGATGACAACCAAGAT
GAAGAAAATGATATTGTGCCACCTACCCCACTTAAAAAGGAAACAAACAC
AGCCACGGAAACCAATATACCATCAGTACAGCCAACTACATTGCAAGCTG
ATCAGGAACTCTATGCCGAGCCGAAGATGGAAAATACTCCATCCCTCACA
AAAGAAACGAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAA
CTCCATGCCATGGAGATTAAATTATGAAGATTTGAAAACAGATGAAGAAA
ATTACGAAGAGTTATCTCATATCAAATGGACTTGCTCTCGTAAGAAAAAA
AAGATTTACAAAGGTTCAACATGTCCCCAATTACAATAGAAGATTATTTT
CAAAATGCAAGTACATCCATGACAATGAAGAAATATTTTCGAAATCCAAG
TACATTTCCAAAAGCATCAAGGATACTGACAAAAGATGTCATGAGAAATC
AAATCGTCAGCTGTGAAGACATAGTCAAAGCTGCGATTAAACAACCAGAC
TACAATGAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAG
AATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAAGGAAAATGCA
ATAACCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATACGAT
TAAGATTGAAGATGACAACCAAGATGAAGAAAATGATATTGTGCCACCTA
CCCCACTTAAAAAGGAAACAAACACAGCCACGGAAACCAATATACCATCA
GTACAGCCAACTACATTGCAAGCTGATCAGGAACTCTATGCCGAGCCGAA
GATGGAAAATACTCCATCCCTCACAAAAGAAACGAGATATGACTATAATT
TTGGTTCCAGTCAGGTAGATACCAACTCCATGCCATGGAGATTAAATTAT
GAAGATTTGAAAACAGATGAAGAAAATTACGAAGAGTTATCTCATATCAA
ATGGACTTGCTCTCGTAAGAAAAAAAAGATTTACAAAGGTTCAACATGTC
CCCAATTACAATAGAAGATTATTTTCAAAATGCAAGTACATCCATGACAA
TGAAGAAATATTTTCGAAATCCAAGTACATTTCCAAAAGCATCAAGGATA
CTGACAAAAGATGTCATGAGAAATCAAATCGTCAGCTGTGAAGACATAGT
CAAAGCTGCGATTAAACAACCAGACTACAATGAAAGCAGCGCACAATTGA
CTTTAACCAACAGCTCACCTCCAAGAATGAAGTGTATAAAGAAAGCATCA
TTCAATCAAGTTTAAGGAAAATGCAATAACCAAAGTTCATTTTGATGTGG
TTTATCGATTATCAAACAATACGATTAAGATTGAAGATGACAACCAAGAT
GAAGAAAATGATATTGTGCCACCTACCCCACTTAAAAAGGAAACAAACAC
AGCCACGGAAACCAATATACCATCAGTACAGCCAACTACATTGCAAGCTG
ATCAGGAACTCTATGCCGAGCCGAAGATGGAAAATACTCCATCCCTCACA
AAAGAAACGAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAA
CTCCATGCCATGGAGATTAAATTATGAAGATTTGAAAACAGATGAAGAAA
ATTACGAAGAGTTATCTCATATCAAATGGACTTGCTCTCGTAAGAAAAAA
AAGATTTACAAAGGTTCAACATGTCCCCAATTACAATAGAAGATTATTTT
CAAAATGCAAGTACATCCATGACAATGAAGAAATATTTTCGAAATCCAAG
TACATTTCCAAAAGCATCAAGGATACTGACAAAAGATGTCATGAGAAATC
AAATCGTCAGCTGTGAAGACATAGTCAAAGCTGCGATTAAACAACCAGAC
TACAATGAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAG
AATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAAGGAAAATGCA
ATAACCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATACGAT
TAAGATTGAAGATGACAACCAAGATGAAGAAAATGATATTGTGCCACCTA
CCCCACTTAAAAAGGAAACAAACACAGCCACGGAAACCAATATACCATCA
GTACAGCCAACTACATTGCAAGCTGATCAGGAACTCTATGCCGAGCCGAA
GATGGAAAATACTCCATCCCTCACAAAAGAAACGAGATATGACTATAATT
TTGGTTCCAGTCAGGTAGATACCAACTCCATGCCATGGAGATTAAATTAT
GAAGATTTGAAAACAGATGAAGAAAATTACGAAGAGTTATCTCATATCAA
ATGGACTTGCTCTCGTAAGAAAAAAAAGATTTACAAAGGTTCAACATGTC
CCCAATTACAATAGAAGATTATTTTCAAAATGCAAGTACATCCATGACAA
TGAAGAAATATTTTCGAAATCCAAGTACATTTCCAAAAGCATCAAGGATA
CTGACAAAAGATGTCATGAGAAATCAAATCGTCAGCTGTGAAGACATAGT
CAAAGCTGCGATTAAACAACCAGACTACAATGAAAGCAGCGCACAATTGA
CTTTAACCAACAGCTCACCTCCAAGAATGAAGTGTATAAAGAAAGCATCA
TTCAATCAAGTTTAAGGAAAATGCAATAACCAAAGTTCATTTTGATGTGG
TTTATCGATTATCAAACAATACGATTAAGATTGAAGATGACAACCAAGAT
GAAGAAAATGATATTGTGCCACCTACCCCACTTAAAAAGGAAACAAACAC
AGCCACGGAAACCAATATACCATCAGTACAGCCAACTACATTGCAAGCTG
ATCAGGAACTCTATGCCGAGCCGAAGATGGAAAATACTCCATCCCTCACA
AAAGAAACGAGATATGACTATAATTTTGGTTCCAGTCAGGTAGATACCAA
CTCCATGCCATGGAGATTAAATTATGAAGATTTGAAAACAGATGAAGAAA
ATTACGAAGAGTTATCTCATATCAAATGGACTTGCTCTCGTAAGAAAAAA
AAGATTTACAAAGGTTCAACATGTCCCCAATTACAATAGAAGATTATTTT
CAAAATGCAAGTACATCCATGACAATGAAGAAATATTTTCGAAATCCAAG
TACATTTCCAAAAGCATCAAGGATACTGACAAAAGATGTCATGAGAAATC
AAATCGTCAGCTGTGAAGACATAGTCAAAGCTGCGATTAAACAACCAGAC
TACAATGAAAGCAGCGCACAATTGACTTTAACCAACAGCTCACCTCCAAG
AATGAAGTGTATAAAGAAAGCATCATTCAATCAAGTTTAAGGAAAATGCA
ATAACCAAAGTTCATTTTGATGTGGTTTATCGATTATCAAACAATACGAT
TAAGATTGAAGATGACAACCAAGATGAAGAAAATGATATTGTGCCACCTA
CCCCACTTAAAAAGGAAACAAACACAGCCACGGAAACCAATATACCATCA
GTACAGCCAACTACATTGCAAGCTGATCAGGAACTCTATGCCGAGCCGAA
GATGGAAAATACTCCATCCCTCACAAAAGAAACGAGATATGACTATAATT
TTGGTTCCAGTCAGGTAGATACCAACTCCATGCCATGGAGATTAAATTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017554XLOC_017554Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030616-proteinTCONS_00030616-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030616-exon-sc0000832-1575043694:108672..108738TCONS_00030616-exon-sc0000832-1575043694:108672..108738Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:107058..107111TCONS_00030616-exon-sc0000832-1575043694:107058..107111Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:106760..106825TCONS_00030616-exon-sc0000832-1575043694:106760..106825Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:106071..106193TCONS_00030616-exon-sc0000832-1575043694:106071..106193Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:105846..105886TCONS_00030616-exon-sc0000832-1575043694:105846..105886Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:105595..105639TCONS_00030616-exon-sc0000832-1575043694:105595..105639Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:105274..105357TCONS_00030616-exon-sc0000832-1575043694:105274..105357Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:104522..104629TCONS_00030616-exon-sc0000832-1575043694:104522..104629Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:104249..104300TCONS_00030616-exon-sc0000832-1575043694:104249..104300Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1575043694:104022..104057TCONS_00030616-exon-sc0000832-1575043694:104022..104057Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:108672..108738TCONS_00030616-exon-sc0000832-1510915933:108672..108738Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:107058..107111TCONS_00030616-exon-sc0000832-1510915933:107058..107111Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:106760..106825TCONS_00030616-exon-sc0000832-1510915933:106760..106825Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:106071..106193TCONS_00030616-exon-sc0000832-1510915933:106071..106193Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:105846..105886TCONS_00030616-exon-sc0000832-1510915933:105846..105886Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:105595..105639TCONS_00030616-exon-sc0000832-1510915933:105595..105639Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:105274..105357TCONS_00030616-exon-sc0000832-1510915933:105274..105357Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:104522..104629TCONS_00030616-exon-sc0000832-1510915933:104522..104629Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:104249..104300TCONS_00030616-exon-sc0000832-1510915933:104249..104300Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1510915933:104022..104057TCONS_00030616-exon-sc0000832-1510915933:104022..104057Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:108672..108738TCONS_00030616-exon-sc0000832-1491911889:108672..108738Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:107058..107111TCONS_00030616-exon-sc0000832-1491911889:107058..107111Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:106760..106825TCONS_00030616-exon-sc0000832-1491911889:106760..106825Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:106071..106193TCONS_00030616-exon-sc0000832-1491911889:106071..106193Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:105846..105886TCONS_00030616-exon-sc0000832-1491911889:105846..105886Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:105595..105639TCONS_00030616-exon-sc0000832-1491911889:105595..105639Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:105274..105357TCONS_00030616-exon-sc0000832-1491911889:105274..105357Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:104522..104629TCONS_00030616-exon-sc0000832-1491911889:104522..104629Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:104249..104300TCONS_00030616-exon-sc0000832-1491911889:104249..104300Clytia hemisphaericaexon
TCONS_00030616-exon-sc0000832-1491911889:104022..104057TCONS_00030616-exon-sc0000832-1491911889:104022..104057Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000832supercontigsc0000832:104022..108738 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.227908	0.740822	0.172033	0	0.614694	0.890523	1.17205	0.731505	0.768216	1.82382	1.07754	1.21429	1.4147	2.30871	1.72552	2.77762	2.2812	1.5198	1.53439	4.22533	1.10177	1.39726	0.783946	1.26706	0	0.0727949	1.14586	2.22344	1.18048	0.601363
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00030616 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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