TCONS_00029745 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029745
Unique NameTCONS_00029745
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length787

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029745 ID=TCONS_00029745|Name=TCONS_00029745|organism=Clytia hemisphaerica|type=transcript|length=787bp
CTAGAATATGCATAACATAGTATACACATGATAAACAAGGAGAAAAACAA
AACgaggaaataaaataattttagaaaTCAATAATGGTGATGCCCACGAC
GTGATATATGCTTTCTGAATCCAGTGCGCTAGGATGCCCTTCAAATTCAG
TTTTTGCGGGAAGGCTGAAAAAGAGCTTTTCCATGTGTTGGATTACAGCC
ACAAAAACTTGCTAAATGTACCAACAGAGATTTACGAACATGCTCAAGCG
CTAGAAGATCTTTATTTGGATGCCAATCAATTAAAGGATTTACCAAAGgC
CCTTTTCACTTTGCAACATTTGAGAACATTGAACATCAGCGATAATGAAA
TCATTTCACTACCGTCAAACGTCTCCAATCTCATCCATCTTATTGAGTTT
GACCTCAGCAAAAATGggtTCCTTGAACTACCGGACAACATCAAAGGGAT
GAAATCCTTGGAACATTTCGACCTCAGTGTGAACCCGCTAGGAAGgcTAC
CAGATGGTTTTACTATGCTGTTGAATTTGACACATGTTTACTTGAATGAT
ACTTTCCTGGACTTTTTGCCGGCCAATATTGGAAGAATGTCAAAATTGGA
AGTTCTGGAAGTCAGAGATAACCACTTGACCATGATCCCAAAATCCATGA
GCCGATTGCAGAGTCTGCGGAGACTCGACTTAGGAAATAATGAATTTAAC
GATATGCCTGAGGTAATAGGAACGTTTACCAATCTTGAAGAATTATGGCT
GGATggcaacaaaatcaaacaagTCCCTCCTGTAATT
Run BLAST on NCBI

transcript from alignment at sc0000768:92001..99031-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029745 ID=TCONS_00029745|Name=TCONS_00029745|organism=Clytia hemisphaerica|type=transcript|length=7031bp|location=Sequence derived from alignment at sc0000768:92001..99031- (Clytia hemisphaerica)
CTAGAATATGCATAACATAGTATACACATGATAAACAAGGAGAAAAACAA
AACGAGGAAATAAAATAATTTTAGAAATCAATAATGGTGATGCCCACGAC
GTGATATATGCTTTCTGAATCCAGTGCGCTAGGATGCCCTTCAAATTCAG
TTTTTGCGGGAAGGCTGAAAAAGAGCTTTTCCATGTGTTGGATTACAGCC
ACAAAAACTTGCTAAATGTACCAACAGAGATTTACGAACATGCTCAAGCG
CTAGAAGATCTTTATTTGGATGCCAATCAATTAAAGGATTTACCAAAGGT
AAAACATATTTTAAGGTTGTTTTTCACAGTATCTTTGTTTCAATGTTTAC
AAAAACTGTTGTGGAAATTGTTTTTTTCGAAGAACTACAGCTTGTCACTA
AAATGTAAAAATGTGGTTTCAGTGTGCTTAAAATTTGTATTTCAACAGGC
TTCATAAGGGCAAGTACCTTCACTGATAAGTCTCCACTGGTCCAACACAG
TGTGTTTTAAAATGTTGGATTTATGACATGATTTTAAGAAGAGCGGTATT
AGAGGCCCAGTGTGTTGCCTAACTGTAAAAACTTTATAATAATTTTTTTC
TATGGTTATGAAATTCTGTTGAATGAAGGTACATTATATTTTATCAATCA
GTCATCAGGTTAATTAACATACCTCATTTAATTAGGTATCTAAACGAAAA
TTAAAACCTAAAGTTCATTTACACTGACCTATTAATTCTGTGTATAATTA
CTATCCTATTACTCAATATTAATAGAGTTTTGCAATAAGACTGTTAGCCT
CTCAAAAATTTTTGTGAGTTTTGGAAAGAAGGTCTTATTAATTAATCCAA
ACTTGTGAGCGAAGCAGTTTTGCTATATTGTGCACGTACCTTTAACTTCT
ATCCCAAGCGAAAACTTGCTATAAAATTTGCTATATAAATCACATCTTCA
AACCGATGATTTTATCAAAATGACCTTGAATGGTTTGGCTTGAAGCCACA
AAAACTTTCTCGGTTTGGTAGCTAGGACTGCGAAAAATGCCGTTTTAAAA
TGGTGTACCCTAGCAGTAAACAGCAACAAAATTACCGGAAGCCGAAACAC
GGACTTGGAATCTGAACTCGTGAAGTTGATCAAATTACCGCGTGGGCATC
TAAGCAATATAAGCAGTGGTTCTTCGGTTTTTAATGTTTATTTTGCTGTT
AAATGGAAAAAAAATAGTTTGAACGGTGACAGAAAGGATCTTCATCATCC
CTTGACTTTTAACAGCAAGTATCAAGTATCAAATAAGGTCAATCAATGAG
AGGTTTTTGCAAGTCGCGGGGCGGGAGGAGTGCTCTTTGAACGAAACTTA
CCTTGCAAAACCAAGTGGATATTCTATGATAAAGAAGTACGAAGGTAATC
AAATTTGTCGAGTTTGTCAAGAAATAAATCAAAACTGCTGAAGAACCAAC
AAGCCATCTTTGTACATTTTTGTTTTTGTTTTATTTTTATGTTTTGTGAT
GATTTCGACGGACGATTCGTGATTCGAATAAAAATGTTCGATCGTTCGAC
AAATATCGTTCGATTTTATTAAGGCACCGTTTACACTAGAATAACTAGAA
GGAAAACAAAAGAGCGATGCTCGCAGGGCAGCGGCGGATGTTGTGCCGCC
GTGGATTATGAAATGTGTTCGGGCATTAAGGCTCTTACGACCCTGTCTCT
ATAGCGGCTTTATTAGAAGAGGGATTTTTAGAGAGTCTCTTATTTTGCTA
GCAACTTGCGAATTGAGGTGGAGTCTTAACTTGTTATTTTAATTGGTTAT
CTGTTATTGAAACTTTTCCCTCATTTTAAAGAATATTAAAGAAATATTAA
ACCCCAAACTTGATGGACCCTTTGTTATAATATCCCTATTTGATATAATT
GAATGTTAAATGAAATTTTATGGGAAAAGAAAATATTTGCCTTATCTGAA
TTTCGTATCATGATGTAAAATGATCTTGCTGCTCAAAAATGAAATGAAAT
TTGATACCAGTGGCATTTTATTAAGAAAGATTTGGTCATTCAAGAGTACA
ATACGTCATACTTCCTTTAAAAAGAAACTTATGTTTTAAAAATAGAGTTA
CAGCTTAGAATGACCATTTGAAAAAATTCTTCAAATATTTAGCACCTATG
AAATCTTAACAGCGTGGACCCCCTTTTGAGTGGACTGGTATTGAGTTTAT
TTGTAGAAAATATTTCTCGGTACAAATTTTAAGAATAAGGGGTATTAAGA
CAAAGCAATAAATTTCCTTTAAAATTGTTACCAGTCTTGTCTCGAACTGA
AAATTTCATTCATATTATTATAATATATATTATTACTATATAATTCATAT
TTTGATCTTTCAGGCCCTTTTCACTTTGCAACATTTGAGAACATTGAACA
TCAGCGATAATGAAATCATTTCACTACCGTCAAACGTCTCCAATCTCATC
CATCTTATTGAGTTTGACCTCAGCAAAAATGGTATGTAATATAAATAAAT
ATTATCTTTTAAATGTTCTACATTCCATTTTATCTCCATACAGGGGGTAG
ACAAACATTTCCAGGGGGTAATCTGAGAAGAATTTAGGGGGTATTCTCAC
ATTTCCACAAATTTTATATTGGCTTAAAAAGGTTCGTAAACCCCATGCAC
GGATTTTTAATGGAACATTTTTGCAATTTCTTCTGTATCAACTCTAGACA
ATTTTAAGCCCATTAAATCTATTCTGTTGGCTGGTCAGAAGACAATTATA
TATTGACTGAATTTACCTAGAGGCTAGACTTAAAAAATTCTTGGTTTGCC
GTCACCTGACCCTACATTTTGGGGATGGTTGGTCGGTCTGAAAATTTTTT
TATTTTGATCATTCATGGAATTTTTGTCTATATTTTGTAATTTTTGAAGA
AAAAAAAATTCTCTTCGTCGAAATAGCAATAAAAGTTTTTTGGTCGTCAA
GTTTTGAGAAGAGTTTTGGTTGGCTGACGGCAAACCAACATTTTTTTTTA
GTTCAGCCTGATTACGTTATACAAAATGAATGATAATTCAAAGGGTACTG
CTAACAAACACAGAAGCTCAACATACAACTTTACTCTTGACATATTTACT
CTTGACATATTTACAGGGTTCCTTGAACTACCGGACAACATCAAAGGGAT
GAAATCCTTGGAACATTTCGACCTCAGTGTGAACCCGCTAGGAAGGTAAA
AACTTATTTCTTTAATGGACTACAAAAAAAATATTTAATTTCCTGAACAA
CAAAGTTTGTAAAAAATTCTCTCAATCGTATTTTTAAAAAGATGTTGTTT
TGTGTTAATGTTAGCCCTATATTGATATGATATGTGTTTAATTTTTACCA
ATGCTTAATTTTTCTCCTCTTGAACATGAGCTATTATAGTCTAAAGTCCT
TACTTTGTAGAGGTGCTAACGAGGCGCTCATTGAAAGCTTCTTGAAAGTT
GCAAAAATGTGAAAATTGCAACTCAACCAAATGGAAATAAAAGCAAAACC
ATCTATTTTTCTTTTAAGGCTACCAGATGGTTTTACTATGCTGTTGAATT
TNCAGTGGCATTTTATTAAGAAAGATTTGGTCATTCAAGAGTACAATACG
TCATACTTCCTTTAAAAAGAAACTAATGTTTTAAAAATAGAGTTACAGCT
TAGAATGACCATTTGAAAAAATTCTTAAAATATTTAGCACCTATGAAATC
TTAACAGCGTGGACCCCCTTTTGAGTGAGTTTATTTGTAGAAAATATTTC
TCGGTACAAATTTTAAGAATAAGGGGTATTAAGACAAAGCAATAAATTTC
CTTTAAAATTGTTACCAGTCTTGTCTCGAACTGAAAATTTCATTCATATT
ATTATAATATATATTATTACTATATAATTCATATTTTGATCTTTCAGGCC
CTTTTCACTTTGCAACATTTGAGAACATTGAACATCAGCGATAATGAAAT
CATTTCACTACCGTCAAACGTCTCCAATCTCATCCATCTTATTGAGTTTG
ACCTCAGCAAAAATGGTATGTAATATAAATAAATATTATCTTTTAAATGT
TCTACATTCCATTTTATCTCCATACAGGGGGTAGACAAACATTTCCAGGG
GGTAATCTGAGAAGAATTTAGGGGGTATTCTCACATTTCCACAAATTTTA
TATTGGCTTTAAAAGGTTCGTAAACCCCATGCACGGATTTTTAATGGAAC
ATTTTTGCAATTTCTTCTGTATCAACTCTAGACAATTTTAAGCCCATTAA
ATCCATTCTGTTGGCTGGTCAGAAGACAATTATATATTGACTGAATTTAC
CTGAGGCTAGACTTAAAAAATTCTTGGTTTGCCGTCACCTCACCCTACAT
TTTGGAGATGGTTGGTCGGTCTGAAAATTTTTTTATTTTGATCATTCATG
GAATTTTTGTCTATATTTTGTAATTTTTGAAGAAAAAAAAATTCTCTTCG
TCGAAATAGCAATAAAAGTTTTTTGGTCGTCAAGTTTTGAGAAGAGGTGG
TTTGCTGACGGCAAACCAACATTTTTTTTAGTTCAGCCTGATTACGTTAT
ACAAAATGAATGATAATTCAAAGGGTACTGCTAACAAACACAGAAGCTCA
ACATACAACTTTACTCTTGACATATTTACTCTTGACATATTTACAGGGTT
CCTTGAACTACCGGACAACATCAAAGGGATGAAATCCTTGGAACATTTCG
ACCTCAGTGTGAACCCGCTAGGAAGGTAAAAACTTATTTCTTTAATGGAC
TACAAAAAAAATATTTAATTTCCTGAACAACAAAGTTTGTAAAAAATTCT
CTCAATCGTATTTTTAAAAAGATGTTGTTTTGTGTTAATGTTAGCCCTAT
ATTGATATGATATGTGTTTAATTTTTACCAATGCTTAATTTTTCTCCTCT
TGAACATGAGCTATTATAGTCTAAAGTCCTTACTTTGTAGAGGTGCTAAC
GAGGCGCTCATTGAAAGCTTCTTGAAAGTTGCAAAAATGTGAAAATTGCA
ACTCAACCAAATGGAAATAAAAGCAAAACCATCTATTTTTCTTTTAAGGC
TACCAGATGGTTTTACTATGCTGTTGAATTTGACACATGTTTACTTGAAT
GATACTTTCCTGGACTTTTTGCCGGCCAATATTGGAAGAATGTCAAAATT
GGAAGTTCTGGAAGTCAGAGATAACCACTTGACCATGATCCCAAAGTAAG
AGAACTATGGTTTTCCCTGATTCTTCAATAAGAAGAAAGAAATCTTTACT
CAACACCATCAGTATTTATCAGTATTTTTCCTTGGCATTCTAAATTCTTA
TAACAAATACACTGTTGTACTCTATAAATTCTAGTAACTGAATATATAAT
TTTTACGTTTTTGTAAAGCATTAAGGAATAACATGTTATCATTGTTTTCT
TTTAGATCCATGAGCCGATTGCAGAGTCTGCGGAGACTTGACTTAGGAAA
TAATGAATTTAACGATATGGTATGTCTTTAAACTTCTTTTGTTCAAAATC
TATCACTTAAGGTCCAAGAAATAAACTGAAATAAATTCGTTCTTTTGCAA
TTGGGTAACCGAATTCCTTGATTATTTTTGCGTTTAGTTTTAAAATCTGG
TTTAATCCTTGTATATTCTTTTCTTTTTCTTCGTTTACAGCCTGAGGTAA
TAGGAACGTTTACCAATCTTGAAGAATTATGGCTGGATGGCAACAAAATC
AAACAAGTCCCTCCTGTAATTATTGAAAATTACTTTTAAACTCTTTTACT
TGTTCTGCTTTTTTTTTTCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTAGTTCAGCCTG
ATTACGTTATACAAAATGAATGATAATTCAAAGGGTACTGCTAACAAACA
CAGAAGCTCAACATACAACTTTACTCTTGACATATTTACTCTTGACATAT
TTACAGGGTTCCTTGAACTACCGGACAACATCAAAGGGATGAAATCCTTG
GAACATTTCGACCTCAGTGTGAACCCGCTAGGAAGGTAAAAACCTATTTC
TTTAATGGACTACAAAAAAAATATTTAATTTCCTGAACAACAAAGTTTGT
AAAAAATTCTCTCAATCGTATTTTTAAAAAGATGTTGTTTTGTGTTAATG
TTAGCCCTATATTGATATGATATGTGTTTAATTTTTACCAATGCTTAATT
TTTCTCCTCTTGAACATGAGCTATTATAGTCTAAAGTCCTTACTTTGTAG
AGGTGCTAACGAGGCGCTCATTGAAAGCTTCTTGAAAGTTGCAAAAATGT
GAAAATTGCAACTCAACCAAATGGAAATAAAAGCAAAACCATCTATTTTT
CTTTTAAGGCTACCAGATGGTTTTACTATGCTGTTGAATTTGACACATGT
TTACTTGAATGATACTTTCCTGGACTTTTTGCCGGCCAATATTGGAAGAA
TGTCAAAATTGGAAGTTCTGGAAGTCAGAGATAACCACTTGACCATGATC
CCAAAGTAAGAGAACTATGGTTTTCCCTGATTCTTCAATAAGAAGAAAGA
AATCTTTACTCAACACCATCAGTATTTATCAGTATTTTTCCTTGGCATTC
TAAATTCTTATGACAAATACACTGTTGTACTCTATAAATTCTAGTAACTG
AATATATAATTTTTACGTTTTTGTAAAGCATTAAGGAATAACATGTTATC
ATTGTTTTCTTTTAGATCCATGAGCCGATTGCAGAGTCTGCGGAGACTCG
ACTTAGGAAATAATGAATTTAACGATATGGTATGTCTTTAAACTTCTTTT
GTTCAAAATCTATCACTTAAGGTTCAAGAAATAAACTAAAATAAATTCGT
TCTTTTGCAGTTGGGTAACCGAATTCCTTGATTATTTTTGCGTTTAGTTT
TAAAATCTGGTTTAATCCTTGTATATTCTTTTCTTTTTCTTCGTTTATAG
CCTGAGGTAATAGGAACGTTTACCAATCTTGAAGAATTATGGCTGGATGG
CAACAAAATCAAACAAGTCCCTCCTGTAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016993XLOC_016993Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029745-exon-sc0000768-1575043694:98734..99031TCONS_00029745-exon-sc0000768-1575043694:98734..99031Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1575043694:95017..95134TCONS_00029745-exon-sc0000768-1575043694:95017..95134Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1575043694:94307..94385TCONS_00029745-exon-sc0000768-1575043694:94307..94385Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1575043694:92527..92673TCONS_00029745-exon-sc0000768-1575043694:92527..92673Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1575043694:92253..92316TCONS_00029745-exon-sc0000768-1575043694:92253..92316Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1575043694:92001..92081TCONS_00029745-exon-sc0000768-1575043694:92001..92081Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1510915933:98734..99031TCONS_00029745-exon-sc0000768-1510915933:98734..99031Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1510915933:95017..95134TCONS_00029745-exon-sc0000768-1510915933:95017..95134Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1510915933:94307..94385TCONS_00029745-exon-sc0000768-1510915933:94307..94385Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1510915933:92527..92673TCONS_00029745-exon-sc0000768-1510915933:92527..92673Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1510915933:92253..92316TCONS_00029745-exon-sc0000768-1510915933:92253..92316Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1510915933:92001..92081TCONS_00029745-exon-sc0000768-1510915933:92001..92081Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1491911889:98734..99031TCONS_00029745-exon-sc0000768-1491911889:98734..99031Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1491911889:95017..95134TCONS_00029745-exon-sc0000768-1491911889:95017..95134Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1491911889:94307..94385TCONS_00029745-exon-sc0000768-1491911889:94307..94385Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1491911889:92527..92673TCONS_00029745-exon-sc0000768-1491911889:92527..92673Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1491911889:92253..92316TCONS_00029745-exon-sc0000768-1491911889:92253..92316Clytia hemisphaericaexon
TCONS_00029745-exon-sc0000768-1491911889:92001..92081TCONS_00029745-exon-sc0000768-1491911889:92001..92081Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000768supercontigsc0000768:92001..99031 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.51417	4.36293	4.89757	3.56248	75.7315	57.8437	52.506	66.0695	37.6548	40.3258	26.6012	26.0182	32.7979	34.263	20.4849	8.24521	41.41	45.2382	23.2145	35.1296	34.6888	8.68152	14.7539	23.0323	31.965	31.2877	38.7979	28.6979	41.3862	17.7744
Blast
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BLAST of TCONS_00029745 vs. Swiss-Prot (Human)
Match: LRRC7 (Leucine-rich repeat-containing protein 7 OS=Homo sapiens GN=LRRC7 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 4.242e-72
Identity = 114/211 (54.03%), Postives = 155/211 (73.46%), Query Frame = 2 
Query:  155 CGKAEKELFHVLDYSHKNLLNVPTEIYEHAQALEDLYLDANQLKDLPKALFTLQHLRTLNISDNEIISLPSNVSNLIHLIEFDLSKNGFLELPDNIKGMKSLEHFDLSVNPLGRLPDGFTMLLNLTHVYLNDTFLDFLPANIGRMSKLEVLEVRDNHLTMIPKSMSRLQSLRRLDLGNNEFNDMPEVIGTFTNLEELWLDGNKIKQVPPVI 787
            C + E+E+  VLDYSH +L  VP E++   + LE+LYLDANQ+++LPK LF  Q LR L+I DN++ +LP+ +++L++L E D+SKNG  E P+NIK  K L   + SVNP+ +LPDGFT LLNLT +YLND FL+FLPAN GR+ KL +LE+R+NHL  +PKSM +L  L RLDLGNNEF ++PEV+    NL ELW+D N ++ +P  I
Sbjct:   16 CFRGEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSI 226

HSP 2 Score: 95.5153 bits (236), Expect = 1.192e-21
Identity = 66/200 (33.00%), Postives = 108/200 (54.00%), Query Frame = 2 
Query:  179 FHVLDYSHKNLLNVPTEIYEHAQALEDLYLDANQLKDLPKALFTLQHLRTLNISDNEIISLPSNVSNLIHLIEFDLSKNGFLELPDNIKGMKSLEHFDLSVNPLGRLPDGFTMLLNLTHVYLNDTFLDFLPANIGRMSKLEVLEVRDNHLTMIPKSMSRLQSLRRLDLGNNEFNDMPEVIGTFTNLEELWLDGNKIKQVP 778
              +L+    +L  +P  +++ AQ LE L L  N+  +LP+ L  +Q+LR L + +N +  LP ++  L  L+  D+SKN    +  +I G ++LE   LS N L +LPD   +L  LT + ++D  L  LP  IG +S LE  +   N L  +P ++  L SLR L +  N   ++P  IG+  N+  + L  NK++ +P
Sbjct:  163 LRILELRENHLKTLPKSMHKLAQ-LERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLP 361

HSP 3 Score: 93.5893 bits (231), Expect = 5.271e-21
Identity = 64/169 (37.87%), Postives = 90/169 (53.25%), Query Frame = 2 
Query:  188 LDYSHKNLLNVPTEIYEHAQALEDLYLDANQLKDLPKALFTLQHLRTLNISDNEIISLPSNVSNLIHLIEFDLSKNGFLELPDNIKGMKSLEHFDLSVNPLGRLPDGFTMLLNLTHVYLNDTFLDFLPANIGRMSKLEVLEVRDNHLTMIPKSMSRLQSLRRLDLGNNE 694
            LD S   +  V  +I    +ALEDL L +N L+ LP ++  L+ L TL + DN++  LP+ + NL  L EFD S N    LP  I  + SL    +  N L  LP       N+T + L    L+FLP  IG+M KL VL + DN L  +P S ++L+ L  L L +N+
Sbjct:  235 LDMSKNRIETVDMDI-SGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQ 402
The following BLAST results are available for this feature:
BLAST of TCONS_00029745 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LRRC74.242e-7254.03Leucine-rich repeat-containing protein 7 OS=Homo s... [more]
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