TCONS_00029737 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029737
Unique NameTCONS_00029737
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1072

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029737 ID=TCONS_00029737|Name=TCONS_00029737|organism=Clytia hemisphaerica|type=transcript|length=1072bp
NNTGTTCTGGAAGTAGAGATCGCGTGATCCTAATGAGAGACATAAGGTGT
CCATCTACGTCACAAAAGGAATTGGTGGGCCATCGACAGGAGGTTTGCGG
TTTGAAATGGTCGCCAGATAAGAAACTTCTTGCCTCTGGTGGCAATGACA
ACAAGCTACTAGTATGGAATTTATCGAGCACTACGCCTTACCAAAGTTAC
AACGACCACTCAGCGGCCGTCAAAGCCATCGCTTGGTCTCCTCATCAGCA
TGGTTTACTAGCGTCGGGTGGTGGTACGATGGACAAAACCATTCGATTCT
GGAACACCTTGACTGGACAACCTCTACACCACGTCGATACGGGCTCACAG
GTTTGTAACCTTGCCTGGTCGAAACACTCAAACGAATTGGTCAGTACACA
CGGTTACTCGCAGAATCAAGTTCTTGTGTGGAAGTACCCCAGTCTAACGC
AAGTGGCAAAGCTAACAGGACATTCGCTTCGAGTATTATATCTGTCGATG
TCACCGGACGGAGAGTCAGTAGTGACAGGTGCTGGTGATGAGACGTTGAG
GTTTTGGAATATCTTCAGTAAAAACACTACACAAAAGGAAACAAGATCGC
AACTTGATTTATTTTCACACATTCGTTGATGGTGGAAATGCCGAACTACG
CATGCGTATGATAAGCTATCTTTATCATTTCTTTAGAAtcactttgtttt
cttttctgttGTTGTTTCATTCGTAGATTCTTTTTCATGACACTAATTAA
ATTGTCTGCTCGACCTCTAataatttgaaaactgaaagaTTTTAGCTTCT
AAAGCACAGCTGCAAACGTGtcatgaaatttttgaatttcttttattgtt
gttttcaaccagaatcacacatatattttacttttgaatcccctttttta
aaattaataacaaattattcaatttttgtGTAATTATTTTTTAGTCAGAT
AGAAtttagttttgtattttttgattttttctcctTCCGAAACCGTCCAT
CCTCTCAAAGCCTGCGATTGACGCACGAAATCTCGGATAACTCTCTCATT
TTGTCATTGCACCAGGGGGGGG
Run BLAST on NCBI

protein sequence of TCONS_00029737-protein

>TCONS_00029737-protein ID=TCONS_00029737-protein|Name=TCONS_00029737-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
CSGSRDRVILMRDIRCPSTSQKELVGHRQEVCGLKWSPDKKLLASGGNDN
KLLVWNLSSTTPYQSYNDHSAAVKAIAWSPHQHGLLASGGGTMDKTIRFW
NTLTGQPLHHVDTGSQVCNLAWSKHSNELVSTHGYSQNQVLVWKYPSLTQ
VAKLTGHSLRVLYLSMSPDGESVVTGAGDETLRFWNIFSKNTTQKETRSQ
LDLFSHIR
Run BLAST on NCBI

transcript from alignment at sc0000768:29775..35265-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029737 ID=TCONS_00029737|Name=TCONS_00029737|organism=Clytia hemisphaerica|type=transcript|length=5491bp|location=Sequence derived from alignment at sc0000768:29775..35265- (Clytia hemisphaerica)
NNTGTTCTGGAAGTAGAGATCGCGTGATCCTAATGAGAGACATAAGGTCA
GTGAGATAAAATGAATTCTTCAACCGATTTTGAATGAATAATTCGTTTTC
TTTTCGAAGAATTGAAAGACTTCTAGCCCTTTTATTCGAAAAGTTTTTAC
TGCAAAGTTGGTACTGTCAAGACACAGAATTCCACTAATCCAACACACTG
CAAGATTTTCAACAATTAAAAATCACCCGTGTTGGCTTGGTTTGGTACAT
CAGCTATCCCTGAGCTAATTTTTTCTGCGATTTTGTATCGGATTAGTAAA
ATAAGAAAGTGACAGTTGTCCTAGTTAAAAGATGTGTCACTGCAAGTGTT
TGGTTTATTAAAAGTAAGTCTGTCTGATTTTAACTTATAGATGCTTTTTA
CACCTCAATACAGTTTAGACAAGTTCCTAATAATTAAATCATAATTTTTT
ATTTCTACAGGTGTCCATCTACGTCACAAAAGGAATTGGTGGGCCATCGA
CAGGAGGTATAATTTACTCTTAATCAATCCTTGAATAAGAAAGCAAAACG
TATCTAAACAGTTGCGCTCCACTATTTTCATTGGAACGGGACTGTTCCGT
TCTCTTGCTTTGAAACGTTCCTAAACCAACATGAACACTGCTTATCACTA
ATAATACCATGATGCCGAAGCGATGCTAAATTGTATTGAACATTGTCTTA
GTCTTTCTAGGTTGATTTACAAAGAAAAGATCGAATTAAATTATATTAGC
ATAAAACCTAGAGAAATTGTCTTTACTCTCAACATTTATCGAAATAGTGT
TCTTCTCAAGTGTTAGTTGTATATAATAATGGCTCCTATACGTTTATCCT
TCTAGGTTTGCGGTTTGAAATGGTCGCCAGATAAGAAACTTCTTGCCTCT
GGTGGCAATGACAACAAGGTTCGATATATGTTTTTTTTATTAGGATATTC
CCTTTTGTTAGTTTCATTGTCTTGTTAACTTAAGCGCTTCCACACTATTA
TACTTTTGGACTGATTTTGTCTATTCGTGAGGCAATCATAATGTGCTTCC
TGATAATAGAGTAACAAAGATGTAGAAATATAAGACTAAGTACTGCACTA
GTACCAGTTTTGATTTAGGAAAAATGGAAAGTTTTAAGTCGATAAAACGA
TCATTTTATCACTATTTTTACTATTTTTGTCTAGCTACTAGTATGGAATT
TATCGAGCACTACGCCTTACCAAAGTTACAACGACCACTCAGCGGCCGTC
AAAGCCATCGCTTGGTCTCCTCATCAGGTATGTAAATATATTGCGTTGAA
AGTTCTTCAGTCGCAGGTAGATTGCCATCTCAGTTGAGTATATAAAGAGG
CTTTTTCGTCTCTAAATTCTGCATAATTCAACCAACAAATTAATTTCAAA
AACGTGTGTTGATGTGCTGTGTAAAATCCATGTTATGTCTGAGACGAGAA
AACTTTCCTTTAGCGACTGATAATGAATGATTGTTTTAGAGTTTGTGGTT
ACCCCATAGTTCATATTCTACCTCGATTAATACGGTTCCGCATTGCCTGG
TATTGCTCTGAAACAAGAATTTGGCACTTACATCATTTCTTATAATAAGT
TGGTATTTATCGACCCAGTGATATTCATATCTACGTTTCTAGATCTTCCC
CGGGCAAAATGTAGAAATGTTTTCTCTCTACTATTTACATCCTCTTTCTG
ATTCCAAACAGAGATCTCGTCCGATCCAACCTATGAACAATTTCCAATAT
AAACAAATTATAAGCTTCATTTTGATGAGTAACCGTAATTCATGATACTC
ACGACGTAATGTTTTACATGGAAACACACCGGTTTTTGCCAATGGTGGTA
AATTTAAAACAATTATTTTCTTGTTTAAATTTGCCACTACATAAAAATTC
GGGGTGTTTCCATAAATAACTTACATAATAAACGTTATGAGCACATGAGC
GTGGTCTTAATTAATCCACCTTCTTCATCATTGACAGCATGGTTTACTAG
CGTCGGGTGGTGGTACGATGGACAAAACCATTCGATTCTGGAACACCTTG
ACTGGACAACCTCTACACCACGTCGATACGGGCTCACAGGTTTGCGACTT
GATTTTATTCCTCTCCCAGTCAGGTAGCAAGTACCTCGACCTAATCTGGG
TTTGTTTATTCCGTTTCTTGGACGAGAGTTTCGAAAGTTCGACATGAAAA
ATCGAATGTTTAGACCCATAAAGTGGAATAGCTGTTACTACGCTTCCAAG
TGTCAGGATTTGCGTTTTATTTCGCTATACAGAGAGTTAAACTATTGCCT
TGTCCATTTTTTTAAGAGTTGTAAATTTTGGAGTACCTCTATTGATTTAA
TTTTAACGCATTGGGCTGCACGGTCATCACTACGTGATATATTTGATGCT
TATATTTTTTCGTTTAGGTTTGTAACCTTGCCTGGTCGAAACACTCAAAC
GAATTGGTAAGACTCTCTTACGATTTCTAAAAATANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGAAGTTAAAATTCACTTTTC
GAAAAGTGTGAAAAACACGTAATAAAAGGGTATTAAATTAAGCATTTTTA
AGCGTTTTCGATAAGAATTTTTTTCAAATTTTTCTAAAAACTGACAATTT
ACTAAAAACTGACTATGTTGTAAACGAAAACTGCTTTTAAAAGTATTTTA
ACAATTAATTATGTCGTAAAAGTCGTTAAATAAGTCAAATACTGAGCTAT
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTAACTTCAAAAGCTTATAACTTGACAACTACTTGACCAA
ACTTAAAAAGTTATACCGCAAAATTTAAGTTAGCATGTCCTCTTTCTAAT
AAAAGTAGTTTTGAGTCTAGACAAGACTTTGTTCGGCCTCAGTGGCTCGC
CAAACGTCCAAAGTTTTTTCTGACGCACCCGGTAGCAACGTTCAATTATT
AAACCAAGGAGTTTTAACTTTTCAGAGCAGAACTTTTCGGATTATACACC
CAAATACATTATATCAAAACTTGGTGAAAATTTTGAATAGGACCGGATTC
TATCTCGATATCCCAAGTGCGTAACCAGTGCTTAGATAACAGTTATTTTC
TTCTCAAAGTCATATATAGCCTATAACTAAACAAGCCACTCTGGGATTGA
TTCTATCTATATTCTATCTATTATAATTTCAGGTCAGTACACACGGTTAC
TCGCAGAATCAAGTTCTTGTGTGGAAGTACCCCAGTCTAACGCAAGTGGC
AAAGCTAACAGGACATTCGCTTCGAGTATTATATCTGGTATGTTTGAAAC
ATTAAAAATGGACGAACAAATTATTTTTTCATGAGATTACACAGTAATAT
AGGATTTTCATCTTTGGCTTTGTTATAATTCTTTGAGCTGTGAACTGAAC
ATGAAACATTCTAGATTAAAGGCCGGCGCAAATGTATCCAACATTCAATC
CAACATTTCCAATTCATTGTTGGACGAAATGTTGGAAGAAAAGTCACGTG
GAAAAATTCGAAAAGTTGCATGAAAATTCATTTACGCAAAAAAGTCAAAC
ATTTTCATCCAACATGATTACGCGAATGCATCCAACATTAAAACCAACAT
AAAAGTGACGTCAATCTCATTAAAAAATGCTAGATGAAAAGTTTGACGGT
GATCAAACTTTATCCAACATGATTTCCAACAATAATGTTGGATCAAATGT
TGGATTCATTTGCGCCGGCCTTAAGACTTCAGTTTTCGGTATCACTCAAT
GCTGTTTTTCTTTATAGATCCTTTTCGTAACTTTTGTGTTTTCTTTTCTC
TAGAGGAAATAGTTGATAAAAATACTTGAAAGAATATAAAAAGGAAGAAC
TTTAATAGACGGGTATAATTTTTCGTCCGGAAAAATCTTTTTGCAAACGT
CACTTTTATGAAAAATCTTAGTCACCTTGTATCCTCCTTTAAACAGTTAA
TCTACTTTGTATCGTTTAGTCGATGTCACCGGACGGAGAGTCAGTAGTGA
CAGGTGCTGGTGATGAGACGTTGAGGTTTTGGAATATCTTCAGTAAAAAC
ACTACACAAAAGGTATGTTTCTTCACTTCTCTCTCTCTCCATCCTTGATT
ATTCATCTCAGTAGTCTTGTAACCGCAGTCGGAGACGACCCAAAAGGCTC
CTATTTCAATAGCTGTCTACCCGAAGGTAGGGGGAAACGCCACTCTTTCT
CCTCGGATTGCTCCATTAACCCTTCATTGGACTTTAAGTACTGTTTTGGA
GTCTTTGGTATGGCCCGGCTAGGGATTTTTAACTCCCGACCTTGAACATC
GTAACTGAATGCCCTTCATTAGTACTACGGGTCAATTCATCTCATGATCG
ACCTCTAAAGTCCCTTTCCGTGTTTAAAAAGTCCAAAATGGAGCTTTCTC
TAAGATTTACCTAAAGCTTTGAACATTGAAATGAGCTTTCGCCAAAATAT
TTGTAGTCACATTTAAAATCCTGATTAATTATCCCTGATACACCCCCCGA
AAGGTTATCTAAATCGTGTTATCTTATTTCCATTTTCGTTTTCCTTTCTT
CTATAGGAAACAAGATCGCAACTTGATTTATTTTCACACATTCGTTGATG
GTGGAAATGCCGAACTACGCATGCGTATGATAAGCTATCTTTATCATTTC
TTTAGAATCACTTTGTTTTCTTTTCTGTTGTTGTTTCATTCGTAGATTCT
TTTTCATGACACTAATTAAATTGTCTGCTCGACCTCTAATAATTTGAAAA
CTGAAAGATTTTAGCTTCTAAAGCACAGCTGCAAACGTGTCATGAAATTT
TTGAATTTCTTTTATTGTTGTTTTCAACCAGAATCACACATATATTTTAC
TTTTGAATCCCCTTTTTTAAAATTAATAACAAATTATTCAATTTTTGTGT
AATTATTTTTTAGTCAGATAGAATTTAGTTTTGTATTTTTTGATTTTTTC
TCCTTCCGAAACCGTCCATCCTCTCAAAGCCTGCGATTGACGCACGAAAT
CTCGGATAACTCTCTCATTTTGTCATTGCACCAGGGGGGGG

Coding sequence (CDS) from alignment at sc0000768:29775..35265-

>TCONS_00029737 ID=TCONS_00029737|Name=TCONS_00029737|organism=Clytia hemisphaerica|type=CDS|length=5643bp|location=Sequence derived from alignment at sc0000768:29775..35265- (Clytia hemisphaerica)
GAAACAAGATCGCAACTTGATTTATTTTCACACATTCGTTGATCGATGTC
ACCGGACGGAGAGTCAGTAGTGACAGGTGCTGGTGATGAGACGTTGAGGT
TTTGGAATATCTTCAGTAAAAACACTACACAAAAGGTCAGTACACACGGT
TACTCGCAGAATCAAGTTCTTGTGTGGAAGTACCCCAGTCTAACGCAAGT
GGCAAAGCTAACAGGACATTCGCTTCGAGTATTATATCTGGTTTGTAACC
TTGCCTGGTCGAAACACTCAAACGAATTGCATGGTTTACTAGCGTCGGGT
GGTGGTACGATGGACAAAACCATTCGATTCTGGAACACCTTGACTGGACA
ACCTCTACACCACGTCGATACGGGCTCACAGCTACTAGTATGGAATTTAT
CGAGCACTACGCCTTACCAAAGTTACAACGACCACTCAGCGGCCGTCAAA
GCCATCGCTTGGTCTCCTCATCAGGTTTGCGGTTTGAAATGGTCGCCAGA
TAAGAAACTTCTTGCCTCTGGTGGCAATGACAACAAGGTGTCCATCTACG
TCACAAAAGGAATTGGTGGGCCATCGACAGGAGTGTTCTGGAAGTAGAGA
TCGCGTGATCCTAATGAGAGACATAAGGAAACAAGATCGCAACTTGATTT
ATTTTCACACATTCGTTGATCGATGTCACCGGACGGAGAGTCAGTAGTGA
CAGGTGCTGGTGATGAGACGTTGAGGTTTTGGAATATCTTCAGTAAAAAC
ACTACACAAAAGGTCAGTACACACGGTTACTCGCAGAATCAAGTTCTTGT
GTGGAAGTACCCCAGTCTAACGCAAGTGGCAAAGCTAACAGGACATTCGC
TTCGAGTATTATATCTGGTTTGTAACCTTGCCTGGTCGAAACACTCAAAC
GAATTGCATGGTTTACTAGCGTCGGGTGGTGGTACGATGGACAAAACCAT
TCGATTCTGGAACACCTTGACTGGACAACCTCTACACCACGTCGATACGG
GCTCACAGCTACTAGTATGGAATTTATCGAGCACTACGCCTTACCAAAGT
TACAACGACCACTCAGCGGCCGTCAAAGCCATCGCTTGGTCTCCTCATCA
GGTTTGCGGTTTGAAATGGTCGCCAGATAAGAAACTTCTTGCCTCTGGTG
GCAATGACAACAAGGTGTCCATCTACGTCACAAAAGGAATTGGTGGGCCA
TCGACAGGAGTGTTCTGGAAGTAGAGATCGCGTGATCCTAATGAGAGACA
TAAGGAAACAAGATCGCAACTTGATTTATTTTCACACATTCGTTGATCGA
TGTCACCGGACGGAGAGTCAGTAGTGACAGGTGCTGGTGATGAGACGTTG
AGGTTTTGGAATATCTTCAGTAAAAACACTACACAAAAGGTCAGTACACA
CGGTTACTCGCAGAATCAAGTTCTTGTGTGGAAGTACCCCAGTCTAACGC
AAGTGGCAAAGCTAACAGGACATTCGCTTCGAGTATTATATCTGGTTTGT
AACCTTGCCTGGTCGAAACACTCAAACGAATTGCATGGTTTACTAGCGTC
GGGTGGTGGTACGATGGACAAAACCATTCGATTCTGGAACACCTTGACTG
GACAACCTCTACACCACGTCGATACGGGCTCACAGCTACTAGTATGGAAT
TTATCGAGCACTACGCCTTACCAAAGTTACAACGACCACTCAGCGGCCGT
CAAAGCCATCGCTTGGTCTCCTCATCAGGTTTGCGGTTTGAAATGGTCGC
CAGATAAGAAACTTCTTGCCTCTGGTGGCAATGACAACAAGGTGTCCATC
TACGTCACAAAAGGAATTGGTGGGCCATCGACAGGAGTGTTCTGGAAGTA
GAGATCGCGTGATCCTAATGAGAGACATAAGGAAACAAGATCGCAACTTG
ATTTATTTTCACACATTCGTTGATCGATGTCACCGGACGGAGAGTCAGTA
GTGACAGGTGCTGGTGATGAGACGTTGAGGTTTTGGAATATCTTCAGTAA
AAACACTACACAAAAGGTCAGTACACACGGTTACTCGCAGAATCAAGTTC
TTGTGTGGAAGTACCCCAGTCTAACGCAAGTGGCAAAGCTAACAGGACAT
TCGCTTCGAGTATTATATCTGGTTTGTAACCTTGCCTGGTCGAAACACTC
AAACGAATTGCATGGTTTACTAGCGTCGGGTGGTGGTACGATGGACAAAA
CCATTCGATTCTGGAACACCTTGACTGGACAACCTCTACACCACGTCGAT
ACGGGCTCACAGCTACTAGTATGGAATTTATCGAGCACTACGCCTTACCA
AAGTTACAACGACCACTCAGCGGCCGTCAAAGCCATCGCTTGGTCTCCTC
ATCAGGTTTGCGGTTTGAAATGGTCGCCAGATAAGAAACTTCTTGCCTCT
GGTGGCAATGACAACAAGGTGTCCATCTACGTCACAAAAGGAATTGGTGG
GCCATCGACAGGAGTGTTCTGGAAGTAGAGATCGCGTGATCCTAATGAGA
GACATAAGGAAACAAGATCGCAACTTGATTTATTTTCACACATTCGTTGA
TCGATGTCACCGGACGGAGAGTCAGTAGTGACAGGTGCTGGTGATGAGAC
GTTGAGGTTTTGGAATATCTTCAGTAAAAACACTACACAAAAGGTCAGTA
CACACGGTTACTCGCAGAATCAAGTTCTTGTGTGGAAGTACCCCAGTCTA
ACGCAAGTGGCAAAGCTAACAGGACATTCGCTTCGAGTATTATATCTGGT
TTGTAACCTTGCCTGGTCGAAACACTCAAACGAATTGCATGGTTTACTAG
CGTCGGGTGGTGGTACGATGGACAAAACCATTCGATTCTGGAACACCTTG
ACTGGACAACCTCTACACCACGTCGATACGGGCTCACAGCTACTAGTATG
GAATTTATCGAGCACTACGCCTTACCAAAGTTACAACGACCACTCAGCGG
CCGTCAAAGCCATCGCTTGGTCTCCTCATCAGGTTTGCGGTTTGAAATGG
TCGCCAGATAAGAAACTTCTTGCCTCTGGTGGCAATGACAACAAGGTGTC
CATCTACGTCACAAAAGGAATTGGTGGGCCATCGACAGGAGTGTTCTGGA
AGTAGAGATCGCGTGATCCTAATGAGAGACATAAGGAAACAAGATCGCAA
CTTGATTTATTTTCACACATTCGTTGATCGATGTCACCGGACGGAGAGTC
AGTAGTGACAGGTGCTGGTGATGAGACGTTGAGGTTTTGGAATATCTTCA
GTAAAAACACTACACAAAAGGTCAGTACACACGGTTACTCGCAGAATCAA
GTTCTTGTGTGGAAGTACCCCAGTCTAACGCAAGTGGCAAAGCTAACAGG
ACATTCGCTTCGAGTATTATATCTGGTTTGTAACCTTGCCTGGTCGAAAC
ACTCAAACGAATTGCATGGTTTACTAGCGTCGGGTGGTGGTACGATGGAC
AAAACCATTCGATTCTGGAACACCTTGACTGGACAACCTCTACACCACGT
CGATACGGGCTCACAGCTACTAGTATGGAATTTATCGAGCACTACGCCTT
ACCAAAGTTACAACGACCACTCAGCGGCCGTCAAAGCCATCGCTTGGTCT
CCTCATCAGGTTTGCGGTTTGAAATGGTCGCCAGATAAGAAACTTCTTGC
CTCTGGTGGCAATGACAACAAGGTGTCCATCTACGTCACAAAAGGAATTG
GTGGGCCATCGACAGGAGTGTTCTGGAAGTAGAGATCGCGTGATCCTAAT
GAGAGACATAAGGAAACAAGATCGCAACTTGATTTATTTTCACACATTCG
TTGATCGATGTCACCGGACGGAGAGTCAGTAGTGACAGGTGCTGGTGATG
AGACGTTGAGGTTTTGGAATATCTTCAGTAAAAACACTACACAAAAGGTC
AGTACACACGGTTACTCGCAGAATCAAGTTCTTGTGTGGAAGTACCCCAG
TCTAACGCAAGTGGCAAAGCTAACAGGACATTCGCTTCGAGTATTATATC
TGGTTTGTAACCTTGCCTGGTCGAAACACTCAAACGAATTGCATGGTTTA
CTAGCGTCGGGTGGTGGTACGATGGACAAAACCATTCGATTCTGGAACAC
CTTGACTGGACAACCTCTACACCACGTCGATACGGGCTCACAGCTACTAG
TATGGAATTTATCGAGCACTACGCCTTACCAAAGTTACAACGACCACTCA
GCGGCCGTCAAAGCCATCGCTTGGTCTCCTCATCAGGTTTGCGGTTTGAA
ATGGTCGCCAGATAAGAAACTTCTTGCCTCTGGTGGCAATGACAACAAGG
TGTCCATCTACGTCACAAAAGGAATTGGTGGGCCATCGACAGGAGTGTTC
TGGAAGTAGAGATCGCGTGATCCTAATGAGAGACATAAGGAAACAAGATC
GCAACTTGATTTATTTTCACACATTCGTTGATCGATGTCACCGGACGGAG
AGTCAGTAGTGACAGGTGCTGGTGATGAGACGTTGAGGTTTTGGAATATC
TTCAGTAAAAACACTACACAAAAGGTCAGTACACACGGTTACTCGCAGAA
TCAAGTTCTTGTGTGGAAGTACCCCAGTCTAACGCAAGTGGCAAAGCTAA
CAGGACATTCGCTTCGAGTATTATATCTGGTTTGTAACCTTGCCTGGTCG
AAACACTCAAACGAATTGCATGGTTTACTAGCGTCGGGTGGTGGTACGAT
GGACAAAACCATTCGATTCTGGAACACCTTGACTGGACAACCTCTACACC
ACGTCGATACGGGCTCACAGCTACTAGTATGGAATTTATCGAGCACTACG
CCTTACCAAAGTTACAACGACCACTCAGCGGCCGTCAAAGCCATCGCTTG
GTCTCCTCATCAGGTTTGCGGTTTGAAATGGTCGCCAGATAAGAAACTTC
TTGCCTCTGGTGGCAATGACAACAAGGTGTCCATCTACGTCACAAAAGGA
ATTGGTGGGCCATCGACAGGAGTGTTCTGGAAGTAGAGATCGCGTGATCC
TAATGAGAGACATAAGGAAACAAGATCGCAACTTGATTTATTTTCACACA
TTCGTTGATCGATGTCACCGGACGGAGAGTCAGTAGTGACAGGTGCTGGT
GATGAGACGTTGAGGTTTTGGAATATCTTCAGTAAAAACACTACACAAAA
GGTCAGTACACACGGTTACTCGCAGAATCAAGTTCTTGTGTGGAAGTACC
CCAGTCTAACGCAAGTGGCAAAGCTAACAGGACATTCGCTTCGAGTATTA
TATCTGGTTTGTAACCTTGCCTGGTCGAAACACTCAAACGAATTGCATGG
TTTACTAGCGTCGGGTGGTGGTACGATGGACAAAACCATTCGATTCTGGA
ACACCTTGACTGGACAACCTCTACACCACGTCGATACGGGCTCACAGCTA
CTAGTATGGAATTTATCGAGCACTACGCCTTACCAAAGTTACAACGACCA
CTCAGCGGCCGTCAAAGCCATCGCTTGGTCTCCTCATCAGGTTTGCGGTT
TGAAATGGTCGCCAGATAAGAAACTTCTTGCCTCTGGTGGCAATGACAAC
AAGGTGTCCATCTACGTCACAAAAGGAATTGGTGGGCCATCGACAGGAGT
GTTCTGGAAGTAGAGATCGCGTGATCCTAATGAGAGACATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016989XLOC_016989Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029737-exon-sc0000768-1575043694:35220..35265TCONS_00029737-exon-sc0000768-1575043694:35220..35265Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:34760..34805TCONS_00029737-exon-sc0000768-1575043694:34760..34805Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:34348..34410TCONS_00029737-exon-sc0000768-1575043694:34348..34410Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:33989..34081TCONS_00029737-exon-sc0000768-1575043694:33989..34081Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:33177..33278TCONS_00029737-exon-sc0000768-1575043694:33177..33278Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:32810..32848TCONS_00029737-exon-sc0000768-1575043694:32810..32848Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:31529..31633TCONS_00029737-exon-sc0000768-1575043694:31529..31633Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:30754..30846TCONS_00029737-exon-sc0000768-1575043694:30754..30846Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1575043694:29775..30259TCONS_00029737-exon-sc0000768-1575043694:29775..30259Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:35220..35265TCONS_00029737-exon-sc0000768-1510915933:35220..35265Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:34760..34805TCONS_00029737-exon-sc0000768-1510915933:34760..34805Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:34348..34410TCONS_00029737-exon-sc0000768-1510915933:34348..34410Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:33989..34081TCONS_00029737-exon-sc0000768-1510915933:33989..34081Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:33177..33278TCONS_00029737-exon-sc0000768-1510915933:33177..33278Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:32810..32848TCONS_00029737-exon-sc0000768-1510915933:32810..32848Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:31529..31633TCONS_00029737-exon-sc0000768-1510915933:31529..31633Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:30754..30846TCONS_00029737-exon-sc0000768-1510915933:30754..30846Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1510915933:29775..30259TCONS_00029737-exon-sc0000768-1510915933:29775..30259Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:35220..35265TCONS_00029737-exon-sc0000768-1491911889:35220..35265Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:34760..34805TCONS_00029737-exon-sc0000768-1491911889:34760..34805Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:34348..34410TCONS_00029737-exon-sc0000768-1491911889:34348..34410Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:33989..34081TCONS_00029737-exon-sc0000768-1491911889:33989..34081Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:33177..33278TCONS_00029737-exon-sc0000768-1491911889:33177..33278Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:32810..32848TCONS_00029737-exon-sc0000768-1491911889:32810..32848Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:31529..31633TCONS_00029737-exon-sc0000768-1491911889:31529..31633Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:30754..30846TCONS_00029737-exon-sc0000768-1491911889:30754..30846Clytia hemisphaericaexon
TCONS_00029737-exon-sc0000768-1491911889:29775..30259TCONS_00029737-exon-sc0000768-1491911889:29775..30259Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029737-proteinTCONS_00029737-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000768supercontigsc0000768:29775..35265 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.86432	4.40974	2.0015	0.95631	40.2486	28.9574	44.5552	47.9466	26.7093	24.5876	25.5729	19.9592	21.6539	24.0211	13.3058	13.703	19.9979	19.1054	27.3129	19.3436	21.9405	24.2535	13.5279	18.2126	109.462	74.5295	11.6122	10.7685	4.60849	3.76556
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR024977Apc4_WD40_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00029737 vs. Swiss-Prot (Human)
Match: FZR1 (Fizzy-related protein homolog OS=Homo sapiens GN=FZR1 PE=1 SV=2)

HSP 1 Score: 338.191 bits (866), Expect = 1.172e-111
Identity = 164/211 (77.73%), Postives = 182/211 (86.26%), Query Frame = 3 
Query:    6 SGSRDRVILMRDIRCPS-TSQKELVGHRQEVCGLKWSPDKKLLASGGNDNKLLVWNLSSTTPYQSYNDHSAAVKAIAWSPHQHGLLASGGGTMDKTIRFWNTLTGQPLHHVDTGSQVCNLAWSKHSNELVSTHGYSQNQVLVWKYPSLTQVAKLTGHSLRVLYLSMSPDGESVVTGAGDETLRFWNIFSKNTTQK---ETRSQLDLFSHIR 626
            SGSRDR+IL RDIR P   S++ L GHRQEVCGLKWS D +LLASGGNDNKLLVWN SS +P Q Y +H AAVKAIAWSPHQHGLLASGGGT D+ IRFWNTLTGQPL  +DTGSQVCNLAWSKH+NELVSTHGYSQNQ+LVWKYPSLTQVAKLTGHS RVLYL+MSPDGE++VTGAGDETLRFWN+FSK  + K   E+ S L+LF+ IR
Sbjct:  286 SGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKVKWESVSVLNLFTRIR 496
The following BLAST results are available for this feature:
BLAST of TCONS_00029737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FZR11.172e-11177.73Fizzy-related protein homolog OS=Homo sapiens GN=F... [more]
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