TCONS_00029635 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029635
Unique NameTCONS_00029635
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029635 ID=TCONS_00029635|Name=TCONS_00029635|organism=Clytia hemisphaerica|type=transcript|length=225bp
TCTTTACCAGAGAGTATCTGCTTGTTCTCTAAAATCAGCCTCAGCTTGAC
AACCAGCAGCAAAACAGCTGATTCTTGACTCGAGAACGTCATCCAGCCCA
AAATCACGTCTAGCCAGTAAAACATTTAATTGACCAATGCACCAAACGAA
TAAACATCAGTCGAAAAACTGACTGGCGAGCCTGTGAATACCTCAGGAGC
AAAATGTCTCTGTTCAGGGAATTTT
Run BLAST on NCBI

transcript from alignment at sc0000760:87734..87958

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029635 ID=TCONS_00029635|Name=TCONS_00029635|organism=Clytia hemisphaerica|type=transcript|length=225bp|location=Sequence derived from alignment at sc0000760:87734..87958 (Clytia hemisphaerica)
AAAATTCCCTGAACAGAGACATTTTGCTCCTGAGGTATTCACAGGCTCGC
CAGTCAGTTTTTCGACTGATGTTTATTCGTTTGGTGCATTGGTCAATTAA
ATGTTTTACTGGCTAGACGTGATTTTGGGCTGGATGACGTTCTCGAGTCA
AGAATCAGCTGTTTTGCTGCTGGTTGTCAAGCTGAGGCTGATTTTAGAGA
ACAAGCAGATACTCTCTGGTAAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016936XLOC_016936Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029635-exon-sc0000760-1491911889:87734..87958TCONS_00029635-exon-sc0000760-1491911889:87734..87958Clytia hemisphaericaexon
TCONS_00029635-exon-sc0000760-1510915933:87734..87958TCONS_00029635-exon-sc0000760-1510915933:87734..87958Clytia hemisphaericaexon
TCONS_00029635-exon-sc0000760-1575043694:87734..87958TCONS_00029635-exon-sc0000760-1575043694:87734..87958Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000760supercontigsc0000760:87734..87958 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	20.051	25.595	8.82266	15.1427	3.85519	3.58146	5.79375	5.33202	5.32461	1.5799	3.89668	3.48478	3.43437	2.64009	4.86324	3.81677	1.10582	0	0	0	0	2.19187	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029635 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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