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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029625 ID=TCONS_00029625|Name=TCONS_00029625|organism=Clytia hemisphaerica|type=transcript|length=942bp
NacgttttggtcaaaatatgctGAGAACATGAGATCATTGTTTGAAAAAC
CTAGTTTATGACCTGAATCAtcacaaacttttttcagcTCTTTCAAATGA
TCTATTGAAGCTCTGTAGGACGAATTTGTAGATGGAAAGAAATCTAGATC
AAGAGTCGGATACTtcaaacattttaagaaaagtcTGAGACAATGATCAT
AATCAAGATATGAGATTGATGGAAGTGGACCAAAATAAGGAGCAGCAAAT
TTTGTAGCCCCATTTCCAAGCGTCAAATACTTGActtttaacttcaaaag
ctCAGGGTTAGGAGACATTAGAGCAACTGATGCTGCAAGCTGAAAGCCTG
CAGAATCAGTTGCATGGCCAATCAATTTGACAGGATTATCTTTCAAACTA
TTTTCTTGTTcatcaaaaaaacattttgaacgtACAACATCCCACAATTT
TAACACATGCTTCCCTTGGTAACCTTTGTTAGGAGTAGGCCAAACAAGGT
ATACTAATGGTTTACTGTAAAGACCAGACAAGGCAGAAAGATTATGGACA
CCTGCATCTTTTGATAGTTTGTTATTTTCAATCGTAGTATCTATGTAAGA
CTTTAGTGCAGAAAATTCATCTTCAAAAGATTTGTCTGAAATAATGTTGT
CAAGTAAAACTTTAGAATCATTCCAATTAGAAAAATCAGGATTGTATGAC
TCACCAACCAGCTCAATTTTTCCCTCTTCATTTAGAACAGGTGAGATAAA
TCTTAGAAGACGGGCTTCATCAGTCGAGTCAATCACTGGACCTCCATCAT
AAAGTATTTGAgcagtttcaaaaaaatcattaaaaccgATTTTCAGATTA
TTGGTTTGAACATGGGCTTTTGCACATGTTTTTCCTGGAAgggcaaaaat
tttctgaaacatGGAGTACTCAGTTTGTCCTAATTTGTTAAT Run BLAST on NCBI protein sequence of TCONS_00029625-protein >TCONS_00029625-protein ID=TCONS_00029625-protein|Name=TCONS_00029625-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
INKLGQTEYSMFQKIFALPGKTCAKAHVQTNNLKIGFNDFFETAQILYDG
GPVIDSTDEARLLRFISPVLNEEGKIELVGESYNPDFSNWNDSKVLLDNI
ISDKSFEDEFSALKSYIDTTIENNKLSKDAGVHNLSALSGLYSKPLVYLV
WPTPNKGYQGKHVLKLWDVVRSKCFFDEQENSLKDNPVKLIGHATDSAGF
QLAASVALMSPNPELLKLKVKYLTLGNGATKFAAPYFGPLPSISYLDYDH
CLRLFLKCLKYPTLDLDFFPSTNSSYRASIDHLKELKKVCDDSGHKLGFS
NNDLMFSAYFDQNX Run BLAST on NCBI transcript from alignment at sc0000760:15548..16489 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029625 ID=TCONS_00029625|Name=TCONS_00029625|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at sc0000760:15548..16489 (Clytia hemisphaerica)
ATTAACAAATTAGGACAAACTGAGTACTCCatgtttcagaaaatttttgc
ccTTCCAGGAAAAACATGTGCAAAAGCCCATGTTCAAACCAATAATCTGA
AAATcggttttaatgatttttttgaaactgcTCAAATACTTTATGATGGA
GGTCCAGTGATTGACTCGACTGATGAAGCCCGTCTTCTAAGATTTATCTC
ACCTGTTCTAAATGAAGAGGGAAAAATTGAGCTGGTTGGTGAGTCATACA
ATCCTGATTTTTCTAATTGGAATGATTCTAAAGTTTTACTTGACAACATT
ATTTCAGACAAATCTTTTGAAGATGAATTTTCTGCACTAAAGTCTTACAT
AGATACTACGATTGAAAATAACAAACTATCAAAAGATGCAGGTGTCCATA
ATCTTTCTGCCTTGTCTGGTCTTTACAGTAAACCATTAGTATACCTTGTT
TGGCCTACTCCTAACAAAGGTTACCAAGGGAAGCATGTGTTAAAATTGTG
GGATGTTGTacgttcaaaatgtttttttgatgAACAAGAAAATAGTTTGA
AAGATAATCCTGTCAAATTGATTGGCCATGCAACTGATTCTGCAGGCTTT
CAGCTTGCAGCATCAGTTGCTCTAATGTCTCCTAACCCTGagcttttgaa
gttaaaagTCAAGTATTTGACGCTTGGAAATGGGGCTACAAAATTTGCTG
CTCCTTATTTTGGTCCACTTCCATCAATCTCATATCTTGATTATGATCAT
TGTCTCAgacttttcttaaaatgtttgaAGTATCCGACTCTTGATCTAGA
TTTCTTTCCATCTACAAATTCGTCCTACAGAGCTTCAATAGATCATTTGA
AAGAgctgaaaaaagtttgtgaTGATTCAGGTCATAAACTAGGTTTTTCA
AACAATGATCTCATGTTCTCagcatattttgaccaaaacgtN Coding sequence (CDS) from alignment at sc0000760:15548..16489 >TCONS_00029625 ID=TCONS_00029625|Name=TCONS_00029625|organism=Clytia hemisphaerica|type=CDS|length=942bp|location=Sequence derived from alignment at sc0000760:15548..16489 (Clytia hemisphaerica)
ATTAACAAATTAGGACAAACTGAGTACTCCatgtttcagaaaatttttgc
ccTTCCAGGAAAAACATGTGCAAAAGCCCATGTTCAAACCAATAATCTGA
AAATcggttttaatgatttttttgaaactgcTCAAATACTTTATGATGGA
GGTCCAGTGATTGACTCGACTGATGAAGCCCGTCTTCTAAGATTTATCTC
ACCTGTTCTAAATGAAGAGGGAAAAATTGAGCTGGTTGGTGAGTCATACA
ATCCTGATTTTTCTAATTGGAATGATTCTAAAGTTTTACTTGACAACATT
ATTTCAGACAAATCTTTTGAAGATGAATTTTCTGCACTAAAGTCTTACAT
AGATACTACGATTGAAAATAACAAACTATCAAAAGATGCAGGTGTCCATA
ATCTTTCTGCCTTGTCTGGTCTTTACAGTAAACCATTAGTATACCTTGTT
TGGCCTACTCCTAACAAAGGTTACCAAGGGAAGCATGTGTTAAAATTGTG
GGATGTTGTacgttcaaaatgtttttttgatgAACAAGAAAATAGTTTGA
AAGATAATCCTGTCAAATTGATTGGCCATGCAACTGATTCTGCAGGCTTT
CAGCTTGCAGCATCAGTTGCTCTAATGTCTCCTAACCCTGagcttttgaa
gttaaaagTCAAGTATTTGACGCTTGGAAATGGGGCTACAAAATTTGCTG
CTCCTTATTTTGGTCCACTTCCATCAATCTCATATCTTGATTATGATCAT
TGTCTCAgacttttcttaaaatgtttgaAGTATCCGACTCTTGATCTAGA
TTTCTTTCCATCTACAAATTCGTCCTACAGAGCTTCAATAGATCATTTGA
AAGAgctgaaaaaagtttgtgaTGATTCAGGTCATAAACTAGGTTTTTCA
AACAATGATCTCATGTTCTCagcatattttgaccaaaacgtN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029625-exon-sc0000760-1491911889:15548..16489 | TCONS_00029625-exon-sc0000760-1491911889:15548..16489 | Clytia hemisphaerica | exon |
| TCONS_00029625-exon-sc0000760-1510915933:15548..16489 | TCONS_00029625-exon-sc0000760-1510915933:15548..16489 | Clytia hemisphaerica | exon |
| TCONS_00029625-exon-sc0000760-1575043694:15548..16489 | TCONS_00029625-exon-sc0000760-1575043694:15548..16489 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000760 | supercontig | sc0000760:15548..16489 . |
Blast
The following BLAST results are available for this feature:
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