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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029575 ID=TCONS_00029575|Name=TCONS_00029575|organism=Clytia hemisphaerica|type=transcript|length=1630bp
CTGATTTACGTGACAGTAAGGATGACGATGAAAATGAGTTGAGAGCAGGT
GATCATGTGGTAGTCATCGATTGCAAGACCTTTGTACCTGAACATATTCC
AGTGGTGAAAGCGTTAGAAGATCTTCAACTACTGTCGACTTTACCTTTCA
ATGACGGTGCCTTGTTGAATATTTCAGTCAATGGCACAACCACACCCATC
GACTTCGATAAAGAATTCCGAAAGTTGTCGGCCAGAAAACGGCATATTCG
GAGGGATTCATTTGGTGAAATTTCTTCTTCTGATTGTGATTATGATagtg
aaacagatgaaaatAAATCATATCAGATGCCAAGCATTGACAAACTTGTT
GATTTCATGGTTGATCAAAGCAAGTTGGAGCCGTTGATTCAAATCAGGAG
AGATGCCCCAGAGAAAGATCTCAAGCTTCTTAAACAACAGCTGTATCGTT
TGATGAAAGAAACAACGCTTGATCGTGAGCAGCTCAAAAGCTTCATCGAA
TCTTTTGTAGAACCTGTTCATTTAACACAAGGGCCACCGGGGACAGGCAA
ATCGTATCTCGGAGTCGTCATTGTCCGTGCCTTGATTATGATCCGTCAAG
TATGGATTAAGTTCTCAGAACATGTTTCAGAGATGCCGATTTTGGTTTTG
TCATACAAAAATCACGCCATTGATGAATTCCTTGTTGATTTATTGAAAGC
AGAAGGTGAAATGTCATCTTTGttaaggattggatcgagtgaGAATCCAA
AGCTTTCTCGTTATCTAGAGAAgaatcaaaaaagttacaagAATGATACC
CAGCAGTATAAAACCACGCTGAAAAGTCTATATCAGCAGACAACTATCTA
TCAACAGATCAAAGATGATTTGTCCCCATTGAGTGAACATCAGGCTCTGA
AGGATTCACAACCAACTTCAAATGCGGAAGTGGCTAGTAAGAAGAAAGCA
AGCTACGCTGCTGCAACTTATCTATGCAACGTCATTGCTCGTGTGCAGAA
GATTGAAAGCTTCTTGGAGAAGGAAGAACAAGATGTAGAATCAGATGCTG
AATCTGAAGACTCTGGATACAGTGATTGCAACATTACCAACCTTTGGAAT
GATCTGTTTCCTATAAATCATCAAAATAACACGGAAACTGGCCAAAGAAA
GACATCTGGAAATCTACAGTTGGAGAAGAAGAACGTTGAAGCACTTTCGT
CCAGAGTTGCACACACTAATATACCTATTCCTGAGATTCTGTTTCAATGG
ATCGTTGGAGAAAATCCTTTACCGAAATGTGGCATGGATGATTGTTCTAA
AGATGTTTTTAAAAGTGGTTTTGTTTATTGCAAGCAGCATATGTGCGTTT
ATGTTACTGAGGAAGAAGGTAAGTATATTTGCAATAACTTTCGTCTGACT
ACAAAGCAATTCTTCTGTGAAAACCATGCTTGCAAATACAAAGGAGAAGA
GGTATGCAACGCTGCTAAAATGGATCCACCACAGATCTTTTGTGAAGACC
ATGCTTGTTTTGTTTGCGTTCAAAATGCACCAGACAAAATTGCCAATGCT
GCTGAAGACGAAGAACCAAGGAACACGTGTACTGACCACCCACTATGTAA
TGCAATGATTGATGAAGACTTCTGCTCAAA Run BLAST on NCBI transcript from alignment at sc0000756:51050..52945- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029575 ID=TCONS_00029575|Name=TCONS_00029575|organism=Clytia hemisphaerica|type=transcript|length=1896bp|location=Sequence derived from alignment at sc0000756:51050..52945- (Clytia hemisphaerica)
CTGATTTACGTGACAGTAAGGATGACGATGAAAATGAGTTGAGAGCAGGT
GATCATGTGGTAGTCATCGATTGCAAGACCTTTGTACCTGAACATATTCC
AGTGGTGAAAGCGTTAGAAGATCTTCAACTACTGTCGACTTTACCTTTCA
ATGACGGTATGTTAAATTCTATTCTACCGTGTTTCTATCTTTAATGGAAA
TTCAACTACCTTCCTTGTTCTCGTTCTCGTTCTCGTTCTCGTTCTCGTTC
TCGTTCTCGTTCTCGTTCTCGTTCTCGTTCTCGTTCTCGTTCTCGTTCTC
GTTCTCGTTCTCGTTCTTGTTCTCGTTCTCGTTCTCGTTCTCGTTCTCGT
TCTCGTTCTCGTTTGCGTTCGTGTTTCAATCGAAGAATAACAACAACACA
CTTATATCTTTCTCCTTTTCAGGTGCCTTGTTGAATATTTCAGTCAATGG
CACAACCACACCCATCGACTTCGATAAAGAATTCCGAAAGTTGTCGGCCA
GAAAACGGCATATTCGGAGGGATTCATTTGGTGAAATTTCTTCTTCTGAT
TGTGATTATGATAGTGAAACAGATGAAAATAAATCATATCAGATGCCAAG
CATTGACAAACTTGTTGATTTCATGGTTGATCAAAGCAAGTTGGAGCCGT
TGATTCAAATCAGGAGAGATGCCCCAGAGAAAGATCTCAAGCTTCTTAAA
CAACAGCTGTATCGTTTGATGAAAGAAACAACGCTTGATCGTGAGCAGCT
CAAAAGCTTCATCGAATCTTTTGTAGAACCTGTTCATTTAACACAAGGGC
CACCGGGGACAGGCAAATCGTATCTCGGAGTCGTCATTGTCCGTGCCTTG
ATTATGATCCGTCAAGTATGGATTAAGTTCTCAGAACATGTTTCAGAGAT
GCCGATTTTGGTTTTGTCATACAAAAATCACGCCATTGATGAATTCCTTG
TTGATTTATTGAAAGCAGAAGGTGAAATGTCATCTTTGTTAAGGATTGGA
TCGAGTGAGAATCCAAAGCTTTCTCGTTATCTAGAGAAGAATCAAAAAAG
TTACAAGAATGATACCCAGCAGTATAAAACCACGCTGAAAAGTCTATATC
AGCAGACAACTATCTATCAACAGATCAAAGATGATTTGTCCCCATTGAGT
GAACATCAGGCTCTGAAGGATTCACAACCAACTTCAAATGCGGAAGTGGC
TAGTAAGAAGAAAGCAAGCTACGCTGCTGCAACTTATCTATGCAACGTCA
TTGCTCGTGTGCAGAAGATTGAAAGCTTCTTGGAGAAGGAAGAACAAGAT
GTAGAATCAGATGCTGAATCTGAAGACTCTGGATACAGTGATTGCAACAT
TACCAACCTTTGGAATGATCTGTTTCCTATAAATCATCAAAATAACACGG
AAACTGGCCAAAGAAAGACATCTGGAAATCTACAGTTGGAGAAGAAGAAC
GTTGAAGCACTTTCGTCCAGAGTTGCACACACTAATATACCTATTCCTGA
GATTCTGTTTCAATGGATCGTTGGAGAAAATCCTTTACCGAAATGTGGCA
TGGATGATTGTTCTAAAGATGTTTTTAAAAGTGGTTTTGTTTATTGCAAG
CAGCATATGTGCGTTTATGTTACTGAGGAAGAAGGTAAGTATATTTGCAA
TAACTTTCGTCTGACTACAAAGCAATTCTTCTGTGAAAACCATGCTTGCA
AATACAAAGGAGAAGAGGTATGCAACGCTGCTAAAATGGATCCACCACAG
ATCTTTTGTGAAGACCATGCTTGTTTTGTTTGCGTTCAAAATGCACCAGA
CAAAATTGCCAATGCTGCTGAAGACGAAGAACCAAGGAACACGTGTACTG
ACCACCCACTATGTAATGCAATGATTGATGAAGACTTCTGCTCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029575-exon-sc0000756-1575043694:52790..52945 | TCONS_00029575-exon-sc0000756-1575043694:52790..52945 | Clytia hemisphaerica | exon |
| TCONS_00029575-exon-sc0000756-1575043694:51050..52523 | TCONS_00029575-exon-sc0000756-1575043694:51050..52523 | Clytia hemisphaerica | exon |
| TCONS_00029575-exon-sc0000756-1510915933:52790..52945 | TCONS_00029575-exon-sc0000756-1510915933:52790..52945 | Clytia hemisphaerica | exon |
| TCONS_00029575-exon-sc0000756-1510915933:51050..52523 | TCONS_00029575-exon-sc0000756-1510915933:51050..52523 | Clytia hemisphaerica | exon |
| TCONS_00029575-exon-sc0000756-1491911889:52790..52945 | TCONS_00029575-exon-sc0000756-1491911889:52790..52945 | Clytia hemisphaerica | exon |
| TCONS_00029575-exon-sc0000756-1491911889:51050..52523 | TCONS_00029575-exon-sc0000756-1491911889:51050..52523 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000756 | supercontig | sc0000756:51050..52945 - |
Blast
The following BLAST results are available for this feature:
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