TCONS_00029082 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029082
Unique NameTCONS_00029082
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1966

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029082 ID=TCONS_00029082|Name=TCONS_00029082|organism=Clytia hemisphaerica|type=transcript|length=1966bp
AAACAACATCTAAAAGTTCTGGATATGAGTTGATTGTTCGACATGAAAAG
CGAATTGACGAGAATTGATGACTACTTAGCTCCATTTTAACAGACTACCT
GGTTTTCCATTCATTCGTTCATTCATTCCTTCAAACGTTAACTTGTTGTC
TCGATTGAGAGAAGAGGAAAAGGGAGCAGCAACACACAGGCGGTGTTTCC
AACCATCATTCTGTGGTCACTTCTTCAAACGAAGACTTAGATCATCATTT
TAAAGTCAACAGTATCATCGAGAACCTACACGCAGCCTGCGATCGTGCAA
GTAGAGTGGAAAGCGCACAGTCTAGCGCAATGATTTCTCTTCTTCCTCCC
CCAGATCAACACCTCATCGCGCCACCTAACCCTCAACAATCATTCGACGA
TCTTCTTTCCAACGTGCAATCGAACCATAATCAGCCGTTCCAATCGCAAG
TCGATCATGTCTTAGCCCAATTCCCGCCGGACACTTTTAAAAACGCACAG
CTTCACTCCATGACGTTCGGTGGAAGTGGTCCGACCGGTGATCAAACGGA
CGCGGACTTGAACAACAACCATCCGGGAATGAATAATCGCCCGATCATGA
ACAACAACAATCAAACTAAACTCACCGACGATGAAGACGATTCTAGTGAT
GATATGGACCGCCCTTCAAAACAGAAACGCCATCGCACCCGTTTTTCACC
CGCCCAACTGAACGAGCTTGAGCGTTATTTCAGTAAAACACATTACCCTG
ACATCTTCGTGCGCGAGGAGTTGGCGATGCGCATTGGACTGACCGAATCG
AGAGTTCAAGTTTGGTTTCAAAACCGTCGTGCCAAATGGAAGAAACGAAA
GAAGACCATGTCTTTATTTCACCACAACAACGGCCTCTTCCCTTCCTACT
TCAATCAGAACCTTCAACCACGCGAGTCGTCTTGCTACCACAACGAACCT
CCTCATATCTGGCCTTCTGCGTCACCCACTAACTTTCCATCCGTCACACC
GACTCAAACTTCCGGAGCCCCTCCACCTCACGTCACAAGCGGCGCAGGTA
CCCCTTCCACACAGTTCCCTTACAGTCAACTTCCGCCGGGCTCATACCCT
ATCGATCGTAGCCCAGTTACTTCTCAAGGGGGCTATGGTCTGAATGGTAG
TGCTGATTGTTCTCGAGATCTTGACTACAGCGTGTCATCGGCTGGCTCGC
CCACAGGGGGAACGCAATATAACACACAACCGACAACTTCTGACCATTCT
GATCATTGGCAGAATACGAACAGCAGCACCAGTGTTCTCGATAACAGGCG
AAAGGGAACTGTGGTTGAACATAAAAGTAGTGCGCCACCTTACAGGTAGA
GAAACTTTGAAGCCCTGAATGCTGTAAGTAAAACTGGACGGACGACATAA
CGCCGACACCAGTGACGTTTTTTGTTGTACACCATGGCAATAAAGAAGTA
TGAACACTTCGCCCAATGAACTATGAATAGTGGACGGCAAGCATCAAAAG
GAGCAATTTTATTACATTTAGTGTATAGAAAtctattttcactttttgtt
aCGCGTTCTCGCTCTAGCAAAGGTCCCTGATAGAGTAACTCTACAAGTTC
TCGACTTTCTAGTTCACGTTTGAATAAGCGAAAGTAAACCACACCCTATT
AAGGGAAAGAAGGGACTTGACGAGGCGATTACTTTAgaactttcttttat
tttaaggcaatttcattgtgttttgttaagaaatttttaggccgaatatt
ttaatttatttattattacctgtgtttatttttctatagtTTTGTTCTGT
TTGTTtgaaagtaaatatcatgtaaataatttttcataaattgtaAACTC
CTATCCCTCATATTACCcgaatttatttaattttacgGAAAAGCAAAATA
ATGTAGAATATTATTGAACATAATTGAATTTTATTGACTTATGTTTTAAG
AGAAAAGATGAGTTTT
Run BLAST on NCBI

protein sequence of Otp

>TCONS_00029082-protein ID=TCONS_00029082-protein|Name=Otp|organism=Clytia hemisphaerica|type=polypeptide|length=339bp
MISLLPPPDQHLIAPPNPQQSFDDLLSNVQSNHNQPFQSQVDHVLAQFPP
DTFKNAQLHSMTFGGSGPTGDQTDADLNNNHPGMNNRPIMNNNNQTKLTD
DEDDSSDDMDRPSKQKRHRTRFSPAQLNELERYFSKTHYPDIFVREELAM
RIGLTESRVQVWFQNRRAKWKKRKKTMSLFHHNNGLFPSYFNQNLQPRES
SCYHNEPPHIWPSASPTNFPSVTPTQTSGAPPPHVTSGAGTPSTQFPYSQ
LPPGSYPIDRSPVTSQGGYGLNGSADCSRDLDYSVSSAGSPTGGTQYNTQ
PTTSDHSDHWQNTNSSTSVLDNRRKGTVVEHKSSAPPYR
Run BLAST on NCBI

transcript from alignment at sc0000724:65752..87057+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029082 ID=TCONS_00029082|Name=TCONS_00029082|organism=Clytia hemisphaerica|type=transcript|length=21306bp|location=Sequence derived from alignment at sc0000724:65752..87057+ (Clytia hemisphaerica)
AAACAACATCTAAAAGTTCTGGATATGAGTTGAGTAAGTATTTTAAATTA CCAACCTcgtattttttgacgtcaaaaaagtgtTAGCCAATCGACTCTGC CACTTGTTAAATGATGGCTGATGATCTTATCCCTACGAAAACGTCGGCGG AAAAAAGTAGACCTCAATCAAAAACTTCTTAACTCACTTAGTCTGACGTC ATTTCACTTAGCcttctgtatttcaaaattaaaagctTATTTACTGTTAC ACACTTTGGAAGTCAATTCTAATGGGAACTCATTTTCATTGGTCGCAGAG GAATTTTAGGAATATAATGTTACAATGATTTTCGTAACATGAGGATATGT TCTCtacatctttgattctttaaatAGTAATAAgaactttcaataaaatt tcaaaaaatggacaaaataaccaaattttgacaaaaactgGCATCACCTG ACAAGAACCTGACCCTTGATGAAGATGAGATTGACAACAACCGTTGTACG GAGCATACTTGCATTaaagataatgaaaaaataaagattcaATGTCATAA ATGTCAAAGAATGCTACATTATGCCTGCACTGGACTACCACCATACCAGC TGAATATGTTTTTGAATAAAGGTTACAGAAAATACCAATGCATAACGTGT TGTTCCGGCAAAAGACCTCAGCATAAAAATCCATCATCAAGCAGAAAGAA TAGAATGCTGTACACACAGCTATAAAGAAATTGATGCATGTGGAAGCATT ATACACCATAAAAGTGAGAATGAAAAGAGACTTACACTAACACCGTGGTC AAGGACTTACAGGCAAGATGTCAGGAATAcctaaaagataaaaatcaagT AACTGATCTAATCCAGAGCCAATTTTCCGTCCTGGAAAAGAAGCTATCCA CCAAAATTGAAGAGACAGTGAATGCTAAGATTTCGAAAGATCAATTGGCA AAAGAACCAAAAACTTTGCCGACGCTGCGAAAGTAAATGGTTCGTTGAAC CTAAACAGCATGAAGCAGTTACTTAGAAGGGAGAAAGTCGAAGAACAAAT CGAAGACCAACGAAAGCTATCAATTGACGCAAACATCATCATCCACGGGG tgcgtgaaaaagaaaataaagaagatatCAACTTCGTGAACGAACTTTTG AACGACGTCAACGTAAAAACTCAACCAACCTTCGTCTCTCGAGTTGGAAA ACAATCAAATGGTGTGCGTCCAATCAAAGTCGCATTCAAAGACAGCCATA TAAAATACCGCTTCATGAAGAAGTTGACTGAACTAAGACAGCACGGGAAA TACGTAAAATTGAGCATCACCGACGATTTGACGAAAATGGAGAGAGAGCA AATCAAAGAATGGAAAAGAAGAGCAGACGAGATGAATAAAGATTTCAATT GGAGGGTGCGGGGAAGTCCTCGTGACAAACTGtaccttaaaaatattttt tgtacaagatcggtttagaggccctcgtgtgcctggactgtaattctttt aattaataaataaataaataaataataataaaataaataatattgaGGCA TGCTCGAGGAAGTTTTCTTGTCAGTCGTCACAGGTTGAATTTCAAGGAAA TGTGTCTTTTTTGTTTGAAGAAGTTTTTTTGAACAGTTCTGCATAAAGAG AGGGTCTGACTTATTATGGTTTACATTTATAAGTACCCTTTCCCCGGAAA AAACTTTGGTGCAGCATTAAAACCATGATATGTAATGCTAGATAAGCTCT TTAAAATGCAATGAGGAATTGAGAGATTGCACCAAGCTGTTGTTTGTAAA GGATTTCACTGTAAAATCTGACATCAGCCTGTTACAAAAGAGGGGGGAAT AAGGCGAATTAAAATAGGCCCTCAAGAGAAGAAATTTCATATGTTTCATG TTTCACGAAAAAATCATCTGCTACCATCTTTATCTCCCTGTGTGTAAATT GTACACTCCAAAAAGGGTTTCTTTGTTTGAGGGTTTCCAACTCTGTTTGC GTTTGCATTTAAAAGCCTATTAAAAACCTGTTTGAGTTTGTTTGTAGGAT TTTACATCTCCACTTCCCTCAAATATTGACCCCTCTCTTGTTCCCAAGGA GGAACTTTTGTTTCATACCTTATTCCCTAAAACTGATATAAAAGGCTTTC AATAAAATCGGGAACGCTACTTTTTATTAAGAAAAATCTGTTTCATTTTT TTNTAAAAGGCTCTCAATAAAATTGGGAACGCTGCTTTTTATTAGGAAAA AtctgtttcattttttcttttttaagtttaaaaatttgttttagcCTCTG GTTGTCAACCGCCTCCTTCTCTCCCAAAAACAGGGTGATAGCCAATCAAA ATTGTGGCTAAAGGCAGAATAGCTTTTTGCTATAATACTTTTAATACTAT AGTATAATACTCCATTCGAGCCAAACTGTTAACAAGGTTTTAACTACACT TTAAACTGGGGTAAAAAATCCTTTCGCAATTTATTGGTTAAATATTAAAG TCGCTTTACTACGATGTCCTTTTAACTTCCAAACTGTTGGTTTAGAATTT CATAATTTCGGTATATAGCTTTGAATTATATTATTGAATATATTGAAGCA AATATATTTCgacattttacttttttcatgttttgatatgGCAAGTATAT TTGATATGGAAACTTTNTGTttcgacattttaaatttttcatgttttgat atgGCAAGTATATTTGATATGGAAACTTTGAATTTCACAAAAgaaatgtc cctttaaaaataatataggttttcttttcttttgtggAATAATACCTTTT TGCCATCTTTcagacaaaaatttcaaactattAGAGTTTCAAATGTTTCG TAATTGAGATACATCTAATTAGAGCATGAGATAAGTTGAGAAATACATTA GAGTACCGCCTGGTAAATTATGACATGTCTTAAAAACATAGAAATTACAA TAATTTTTAGAATGCATTATCTGGcagaaagtaaacaaaccaattactgt accgggtgcaccaaaaaaaagtatataggtttgtcgagatattgtgagct tcaggatttatattttttgttcattctttttttattgtatagaggatgct ctaacttgaattttgagctattacgcattaaattttgaaaaagtagttcg atagttatttcaaaaaaactgactttttttccatgtcgaaatttcaaaaa atcattaaaaacagcaatcacgctataaataagacaaaataacaaaaaca caattccattgtctttttgattcttttttctcctatcttatattttgcTA ACGGTTTGTCCATCTTATTTACACGTCATGAATATTTCCAACACCaacaa actcaatgcagacccaagttacacaagttctttgagcaactagttgagga atggtgatttattttttcaaaaattttctcacgtaGCACACCacacctct cttggagatttccaaaaaagattttcagctttaccaaaaatatttttcca catgggaatagctcgttttaccatattcttaaattccataacgagttttg atgaacacagttgcatcttttggtatttttatgtgtaaagaaggtaagtg ccaagagaaaagtttgctcgctgtttttgatgattttttgaaatttcgac ataaaaaaaagtcagttttttttaaataattttcgaattactttttcaaa cctaatgtatgatagctcaaaattcaagttagagcatcctctatgcgata aaaaaaagaatgaacaaaaaatttaaatcctgaagctcacaatatcacGA AAAAGTTGTATACTtctttttggtgcacccggtacatTAAGGGTTTTTTA TTCTTCTGATATTTATGTTGACAGTGTAAAATAGTCTGTTTGAAACAAAT CGAATCTGAAACTAACAAGGTATTCACTTGGTACAAAATGATAACAAAGA AATTACCCTTGCACCTCACCCGAGTGACATCTTAAACAAATACGAGGCtc agttttctcattttttgctCGATGCTACTTTTCTCACACCCTTAAAATAA TTGAGATGGTTTTATCGAAAGAGCCCTTGCGCAGGGTTGAAGTGAGATTT TCTCATGATTCTCAAGTTCTTTTGTAGCACCTAAAATCAAGTTATTGATT ATTAGATTTTATGAACATGAACAGTCTAGGTCTTCTTCTCGTACTTGCCT TAGAAATGTGGTCAGATAACGCACTGGTTAGATAGAATCATATCAccgaa aatattataaaaacatTATTACTGGTTCTAGATGATATCAGTCTTCTTCT ACAGTCAACAAGTTAAGTTCCTTTCAATTAAGCTATTAGTAAAAGTTTTA AATGCGAATAACTTTTGACAGAGGTTGAACTAGACAGCAACTTTGTAATC GTTGAAAGGATAATAGTGAGTGTTGTATCCTAAAGTGATTACCTCGTCCC TTTTATGTAAGTGGGCAGTAGTTAGTAGATAGAGGGAAAGAATTCAAAAT CTTCTGTCCTCAACGACATCTTTAACgtacaaaaaaacttgaaagtGACT TCTATGTTTCTTCATACTAAATGATGAATTAACCTACTGAAAGTTGACTA ACTTatcgatttttaaaaaaaaggaagatttCATTTTAAGTCAAGGGAAA TTCCGATggataattttttgattttctttggaaaatattttgacgtttct ttttttgaaatttttaatttttaaacccTGAAATGCTCACAGGAAAAGGA GCAGGTccctcttttttttatatatcattGGTTTCTGAGCAAAATCACTC AGGAGGGTCAAAATCGGAGTTTTTCCGGGTAGCGCAAACCAGGGTTGCTC CTCCCAGGACCTTTGGCTTCCCCACTTGCGATGTCAGGGGTCCCGACACA GTAAATCGAAATTTAAGACAACCTgatcaaaaaaattgatgaatattGGT CATGGTTTTAAAGAGGCCTACGCGAATAAGAAATAAGTATTCGAATCCAT GAAAATGATCTTAGCTGTTCAACCACAATTCAACTTAATCTGTTTTGGAA CACAAACAAATAACTCGTAACTCATTTCCTCAACAAAGTCTTACAAAACC CTTTTTGAAAAAGTCATTTAAAGAACGTAAGTCTACTTCTCAAGACATCT TCAAGAGGCTAAAGAACTGAAGAAGTCTGCAATCAGCAAACATAATGGGG GAGTAAACATCTCTCTACAAAAGTTGGTGAAAATAtgaatttctgaattt taacCTTTGCTTGTGCTCTCACCTCGATAGTTTTTCGGTAGTATATAATG AGATCGTTTTAACAATCTTTTCCTAGCTAGCTGGACATTGGAAAAGTGCG GATTCTCTTTGACTTTATGAGTTTTAAAGAGCCCTCTTCAAACTGATACT TACATAATAGAGCTCGTTTGCGCAATCAAATATTTCTCAAGCACGCAGGT GTTCCGCACGCGCGCGCGcgactaaaaacaaaaaatttcagcaaataTGT GAAAGAGCACCTTAAGCTCTTGCataaaaagttaaatttagATCTATACT TTTGAGTCTCTCTTATTTGGATGCCGCCCAAGCTAGTGTTTGCTCGATAC AGGCTAAATTATTGCTCAACAAGGAAgtatatgacgtcatcaaatctCGA AAGAAGGAACTGAATGTAAATATTGTCAAATTTCATATCTCTATGTTTTG CGTTCCTCATAAGAAAAAACCGCTCAAAGtgctttttgtaagaacatacA CAGCGTGTTCGGGAAAAATCGAAGAATAATCTTTATACAAAATGCTAACA ACCCGATAACATATGACCAAATTACTTGAGTTGCTTTCTCATTAACCTAT TAAGTTAAGGTAGGATTTAAGAGATTTTAACTGTAATGAATCTGCTTTTT ATCCCGAACACACGGTCAGTAAAACAACAAAGTAATTGTTGAATGGGTAC TTTTGTATTGTTAAGACGACCTTGGAACCCATCCATGTTACAGAAAGCAG AACTAGCTATATACTAAGAGAAGTTTCCAAGCACTTTGAATATCTGTGTG CACAAATAAGCAGTTCTAATGTAAATAGAACTCGTCTGCTAATTTATCTT CgctaaaattcttataaaaaatcagcAGCATCTTCAAACGCTAGCCTTGC TTCCTGTCCGCGAATCTCTCACTTATTTACTGATGACGATATCCTTTATC AGCAAACAAATCGACTTTTTTGACATGCTATTATTAAACTTGGAGGTGTG AATACCGCCCACCCTATACAAATCAATATCGAGTTTGCTTTTTACAATGG CAGGAGCATAATTACTTAAAAATgctctttcttttaaaaacttaaaaaca atcatcggttaaaatttctttttaaaaccctacccagaaaaaacaacaaa aacatcaaaaaataatttttctcatCGTTAATAAATTTCACGTAAATTCG CATATAAGAGCTACATATTCGAAATGAAAGAGTTGTAAAAACAATAAGAG AGGTACCCTTTGTTGCTAGTTATGATTCGACCAGAATCTATTTTTGCATC CCTTCTATATGACGATACGATGAAGTAAtataaaaacaacacaaaatatG ACGAGGTCATGATTTTCTGTCGTACTATGCGAACCGCGCGACACAAAACG GGGTTTTTGTTCCCTTCTTTTTCATAGAAATGTCGTATTCTCTTACTCCT GATTTGTTTTACTTCTCCTTTCATTGTAGTTGTTCGACATGAAAAGCGAA TTGACGAGAATTGATGACTACTTAGCTCCATTTTAACAGACTACCTGGTT TTCCATTCATTCGTTCATTCATTCCTTCAAACGTTAACTTGTTGTCTCGA TTGAGAGAAGAGGAAAAGGTAAGCTCTTCTTGACACTTTCATTAACCTTC TCTTTTCTTCAGAAATGTAAGTACTTTTATCGTGAGATTATCTGCTATTT TGAATTGGAGAAGCTCAGGTTTGTTGCAAATGGATTGCTTTGCCAGTATA TTGCCAGAAAACGGTTGATCTTATTTCCTGATGATGTTTTAATTATATGT TGCTTTAATTAGTTACTTTCTTCACGTGGCAGGGGGAGGGGGCATATAAT AAATTTGTTTTACATCATAATGTTCTTCTTAAATTGCGTGCTTATATGAA AAATAGAGTAGCTTTCACTTACACGGGACTTACGCCTAGTCTAATCACGT CAACTAACTTTACCGAAATAAGATTTGATTTTCATTGTGGTACTACCCGC CAGctaattttaattaaaaagaagTTTGCGTGGATTAAGTGAGTATTCAT GAGTCACAAGCCAATACTCATCTCCCAAGGTGGCGTATTTAGATCGTTTT AAGTCCCCGTGTCTCATAATTCCTAAGTCTTTAACATCATCTTTTTGAGC GGAAACGAGAGGCTGATTTCCTCTATCGGAGTCAGTCTGCCATTAAATAT TGAACAAGTAGGAGTCGCTactatttcaaatttctttaagaaatcccttt tatttttcaaagtcgATAGACCAaggaaaatatttagaaaagaaGAAACG TATATAGACGCAATCGAAGATTTTATATTCAAAAAGTTGTATAACTAAGT AATTATAAAATCGTAAAAAAACTGTTCTtcattgaagatttttttaacaA TAGTTTATTTTCGAAAAGTTAACAGTTGAGATTTTTCATGCCATGTTTCt tactttttgtaaaaaagaagTCTTTCTAAACATGAagtaaaagaacaatt tttcatTCTGAAGCTCTGTCCCGCAGATCGAGAAAAGGTGGTCGCACggt atttaaaaacaaattttatggCGCTTTTACAAAGGAAGTACTGgattaaa aaaatctataagAGAGTAAGGAACTCACAATAGAAGCCGAATGACTCAAA TACTTGATGATAGCGAGGCTCACAGTTTAAACTTTCAGAGATCTCAAGTG ACACGCGCCTTTCTCAGTGTTCCATTAAAAAGTTGAAGGGTGGTACTTAG TCTCTTGTATGATAATACAACCCTCCTCTGAAATAGTAAAACCACTtttt tattggaacattttgagAATATTTAACCCGTTGTCTTACAACGAGAGTAT GCCGGTATTTCTAGGTCAATTGAGAATGTTCAAtttgaatatccaaataa ttcCCAACGATAATTTTCGACGAACATGGTCCGCCACCATTCCATTCATC TTTGAAATTCATCTCTAAATGATAGCTAGCTagatttttcaacaaattct tAAAGAGAAAGTTGGGGACACGGCAGAACACCATATAAAAAAACCTGGCC CAAGCTTTCTTCGTTTAGTTTTTTGTCATCCCACTAGAAGAAACAGCAAA GAGCAGAGAAGCCACCTGGTAACACGACTCTTGTTTGAAACCTTACAATC GAAACAAATTTACGATTACTCATTCGAGGTTAATTTTTCTGTTCGAGCTA GGAACTTCTAATTTTACTGCCTACCGCTGTAATCTTAAAGAAAAATGTTA CATATAAACATTGCAAAATTCATGAAGAACGTTGAAGGTCGCGCCGGTAA TCTCGTAGCTGGAGTGGTAGAAAGCCTCTGTAATGTATGCCTGCAAATAT CTTATTTTCATTTCCTAAACCAGCATGATGCAGGATTTTGGAGTTGAAAT TGGAAAAGACTATTTTTAAAACATGGTATTTTCTTCCTTCCAAAAACCTC TCTTTGTTTACTTGTGGTGCGCAGAAGCGAATAGCAGGGTTAAGAAATAA CCAAAACACTCGCAACCAACAAGAAATATGCTGTGAGGAGAGAGAAACTA AAGCTTAGGTTTTTTGTGATTTATCTCACTAACACACTGANGAGAGAAAC TAAAGCTTAGGTTTTTTGTGATTTATCTCACTAACACACTGAGATATTGC AATATCTACTGCTCATACAAACTCTCAGAACCCTTTTTCCTTTTCATCGA TGTCGACATAAAGGCCAATCAAAGCTACCCTATTACTTTATATAAACGCT CTTTCAATTTCCGCAGCACGATGCTTAAAAAAGTCCTTTGctgctttata ttttttcatcttcgtttatCAGACTGAAAGACAGACAAAAAACTATCTTT ATAAACCTTCTTATTTGAAACACACTTAAAATCTTCCTTGTTTGGATAGA CTGCAAATATTGCTAGAGTGTTACTGTAACATTGTTATTCAAGATGTTTC CTCCAAAGTGAAAACTTTCCGGCGCTCGTTTCGACCATCAATAGCCAGTG CTTCAGGGTTTCAAAAGTATGATTAACCTGCGGAGTCACTTTTTGAAgat catttcatttcatttcttcattttctaattACTCTTTAAATTTGTAGTGT TGTCATAAAATTTCTCCCTGAGAATGACGGTTCCAAACATTAGTATTTTT TAGAATTCAGAGGAACTGAAAATGACAGACAAACTGATATACCCATCgct ctttgattctttaacCGGACAGGGACTTTCAGGAGCAACGCAGTGAGACA GGAGTGTTTAGAGGTTGTGCATTGTAGCCTACCAAATTTTAATCTCTGAA AGGATCTTGATTACTCCGCGCATGCCACTTCTACACTTTTAAGGGAGTCT GCTCAAGTTGACGGACCACTttcatctttttctttcaaatttaagTGCCA GTaattggctaaagcaaaacaaaggCACCAATACAAACGTCAAtcataaa cattagaacccagtcgctttcgctttcttTCCTGCTGATCAACCCGGTCA TATCATCACATTCGCCACAACCCTTTTAGTAATAGAGCACGGCatgcgca gaatggatgataTCTTATGAGATTAAGttaattttgcttcatttcGAGAA ATATTCCAAAAGAAGTCGCGCTACGTCCTAAAACGGTTTTAACCAAAATA TGATCTCAAGTGACGTCATCTTTTGTTCTGCACCAATTGTTAATTTGTAT GCAAACATTTGCAAAACTTGTTTTAATCTGTTTGTCAACATGCacgtttt gttttgtgttttatgGGAAGCGATCCTTTCAAGCGTGTTCAGCAGACATG AACCCTCTCACAAAGTAAACagggaaattcaatcccacTTCTTTCGacga aaaatgatttttctttaagAACCATGAAAAAGTGCGTGCTGTAGGCAAAG ATTTATATAATACTGTGAAATGTATTGAGTATTAAGTCGATTAGGGCTAA ATGACGATAACTGGGCTTTGGTTAAATTTCATGCTTGATTcgaattatta ttatcattttaTGATTTATCTTTACATTCGAAACTACAAATTCTTACAAT TACAATTCTTGTGCTTATAAATGCGCTTTTTCTATCATCATATCATCCTC TTCTCGTTTTACTTTCCTCTTCTTTCCACCAACACCTTGCATCGCTTATT GTTGACTTGCACGATACATGGCGAGAATGACAAAGCATGCAATGCCTCGT ATCTCCATGGCAATCTTCATTAACATTTTTGCGATGTCAGTCTCTTTGCA TGCTTATTATCAATAAGAGTTACGCGAACTTGTCGCTTAGTAACCAATGC ATTTACTTTCATAATGGCAGTAAAGCCATTAGAAAGAGTTTCAACAGCAG GAGACAATCAGCTATGGCCAGAAGACTTCTTCGGGGAACGCGCGAAGCTC GCGGTTCGCCACAGGGAGAAGAACTGACACCAAACACACCGGCCAGGATC AAATCTGCAATTTCCGGTGTATCCTTATTATGAAAAAAAGTATGGGTAAA ATAATTACACGAGGGGAGCGAGCACGAAATTTATAgcgatatttttcaaa aagcaaaaTGGCGTCGAAATAAGAGATCGTGGCGTGCACCCACTCTACAG AGTTTCACTGGAAATATGGATGCTCATATATTGAACGTAAAGTCAAATAG TGATTGCCTCCCTTACACCTTCTTAAATGAAGATTTCTTTCATATGGTAC TTAAAAGCATGGGCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGTAGaccatgtcatacgtttttaagagttactattt taagctggtttgagaccaaatcaaaccacaaaaactattattctccccaa ttagatatcgttttaaggttctttgagggtgtaaaaagtgaaaaaatttt cttcgtcgcctaaccatggtgggcgacatttattccaaaatgttggcccc ctcacttaaaatggctcgccggggctCATGAAAAGGGTAACTTTGGGTAC ACTATTTCGCTTCTCTTTAAAAGTCTCATTTCAATGAAGATTGAACTGGA AAAGAACGAGGATGATAAGGTAGAGCTAGCAAGGGTAACTTCCTCACGCT CGCGTTGCTGTACTAAGATTGCAAAATGTGAAATGATCAGTTCATTGGGA GTCTTCTTTGAAATTCCATTATTCGAACCTTTATCAGTGTACTCTATGCA GGGCAAATAGCTCTATCATAATATCCGACGGAAAACATTTGAAATGATAA GATTTAGAAATGGACGGATAAATATAAAGCCAATGTCAGTCTTGGGGTTG TATTATCAACTTTAAAACTGAAGTGATATCAGgcttttcattgtctttta ccTTTCAAAGGGGGTTCATGATTGGTCCTTCAGTTTGATTGGCTCAAGCT TTATCACGTGACTAACATGAACGAATCATTTTGAATTCTGATTTCAATGA GAAAGGAGAAAGTAGATTTTTGCCTTCCAGCTCTTTATAAAGGGAGAAAG AAATGGCAAGAATAAGTTAATTTGTCTATTGTATTCTTGTCGAGAAGAGC GATCATTTTTGTGATAAGAGAAGGTTATTGGGATCCTGATTTGAAGTTGT TTAACAATCCTAATCTACATGCCTGCTTATAAGAATAAGTACATgtatat taaattttatttatttttgtgtttacagtattaatttgtttttaatttac gCCTGAACCTTTTAGTTTTCCTCTCCTGTCAGGTTTTTTGGTTCTTATGG GttctatttttcgatttttgctgAATTAATTTCAATCCATAGAGTTTTTT CATTAAATAAAAGCTTCGACATTCTACAGTTTACTTGTCTTAGTAGAGAG GGTGACATTTTCAAATAGGGTGGGGACTTCAATTTCTAACTTGAATTACA TAGATGAATTTCTACTTTGcttctttttctcttttgttagtTCTTCACAA TGTATTctcttctttgttttcatggaCTACACGGGGAAAATCTGTACTTC CCATTCGCTAGTTCTTTAAAGCTATTCTCCCCTTATTCTTTCGTGATTCt tctttgaaaacaaaaacaaagaagaaaattctAAAGACACAAGGAAGTGA AAAGATAGAAATGaaaagatttttataaaaagccAATGTATTCATTGTGG AATTTTTAATATCTGTGAGGTTTCGGCCGAAATGTCATCCCATTCTAATT TGGTTTTCTTCTCACCTAGGGAGCAGCAACACACAGGCGGTGTTTCCAAC CATCATTCTGTGGTCACTTCTTCAAACGAAGACTTAGATCATCATTTTAA AGTCAACAGTATCATCGAGAACCTACACGCAGCCTGCGATCGTGCAAGTA GAGTGGAAAGCGCACAGTCTAGCGCAATGATTTCTCTTCTTCCTCCCCCA GGTATGTTTTACTGTAATTATTTTTTAGTGATTTCTCCAAATTATTGTTT TGTATCATTCATTAGTTGATTTCTAGTTGCTTTACCGTTCTCTATTTCTT CCCTTGAATGTCAaagaattttcactttttatctttttttaaaaggaaGA AGCAAATTAAGGACTAATTTGCGCCTAATTACGGATTGATTAGTTAGTGA TAAATGAAAATTCATTTAtagtttcttactattttttTACTACTTAATTC TTTCTCGGTTctttgaagagaattttttgaattgctaataaattattttt caatttttgtgttcgaaatgaattttattcggaacttttattttttaaat attttgatcatTCATTTTGGCTGCGTAGTCATTGAAATTAATCTTAATTT TCTtcaattaattttgaattttaatttgcGCTTTGCTTTTTAATCTAGCG TACGAAATAGACGCTGATTTTGCAATAGACACGCGAGCAACAATATTtta gaaatcaaaaaagaaagtgcaaaaaatttggcctaactttttttgaaaat gaaattaattcTTTAATAATCGAAATAATCCTAGCTTAAAAAATTCTATT CGTCAATAGATCAACACCTCATCGCGCCACCTAACCCTCAACAATCATTC GACGATCTTCTTTCCAACGTGCAATCGAACCATAATCAGCCGTTCCAATC GCAAGTCGATCATGTCTTAGCCCAATTCCCGCCGGACACTTTTAAAAACG CACAGCTTCACTCCATGACGTTCGGTGGAAGTGGTCCGACCGGTGATCAA ACGGACGCGGACTTGAACAACAACCATCCGGGAATGAATAATCGCCCGAT CATGAACAACAACAATCAAACTAAACTCACCGACGATGAAGACGATTCTA GTGATGATATGGACCGCCCTTCAAAACAGAAACGCCATCGCACCCGTTTT TCACCCGCCCAACTGAACGAGCTTGAGCGTTATTTCAGTAAAACACATTA CCCTGACATCTTCGTGCGCGAGGAGTTGGCGATGCGCATTGGACTGACCG AATCGAGAGTTCAAGTAagttgttttctttttacattacAAATCTGTTTC AATTTCCTCATCATTACTTGCTTTAAATCCACTTTTTGTCGTGTGCAACG CatgataaaatcaaaaactttaaatatattttacaaTTATAAACCCTTGA TGAAAATTCCCTCAGAAACTGGAATAAGTCGAATCACTTATAACACAACA TATTGCAATCGCTTCACCTAAACTTTTGCTGGTACTTTTTCACCACCTTC ACACTCTCCTGGAAGCGTTTTTCCATTTCTACAGGTATTTGTTGAAGGTG ATGTTTCCTCCAGATTTATAGCCTTTTTCTTGTGCTAATTTATGTTTAAT TTAACGATTAAATTAACGAGAGGTAATGAATACTAATCGGTGATAATTAA ATATCTGCTGATTAATTAGTTTAATGCAGATAATTTATTGAATTTACACT TTGTTTGCAAACAAGAAGAAATGAGGGCTTTTAAGAAAGAAGGGAAGACG GGTTTTAATTTCTCGATCTTGTTTCTAAGGTAAAATTACTTGGTAAAATC TTGGAATTCAACTGTTTCCAAAAAAATAGAGAGTTTAGACATGAAAGGTT TtgcgatttttgaaaaacatttctaaTGAAACTGTGTGAAAAGTTCTTCC GAAAAAACGTTGAGGCGGTTTCAGTTTTTTGTTCTTCCTTACAGTCTATT AAACTCTCGTTTTCATGAGTTTTGAAAGGGCTTTCAAGCAAGGATGNTCC TTACAGTCTATTAAACTCTCGTTTTCATGAGTTTTGAAAGGACTTTCAAG CAAGGATGTTAAGTTAAACGCACTGCTGAAAGTTTATTTGTAGGAACGGT CCGCAAAGCGGCTCATTAGTACACTCATTCgataagaaaatctttttttg attttatgttgAAAAAGTGAGTTAGATATACCTTACTAATTGAACCAAAC CTTTTTCATAAATCTCCAAAAAGAAGATACATTTTATCAATTCTTCGTAG CAGGATAATAAAGAAGAGTCTAACGAGGAGGTGTTAACCGCGTTGTCAAA AGCACTATTTGTGCCCCCTAAACCTCTTGCCCAACAGGTGGAACTCAATC CTGTTACTTAAAACGTCCTCTAACCAACCCTCTAAATAGTGCGCTAAACG GTTTTGTCTAATTAATATACCCTCGAGATTCCCTCTTTATATAGTTGGGG CCCTAGGATTATCTGCACCTAGTCTATAGTATTTGTAACTTGCCATTGAT TTGACGGAGTATGCAAATCAGAAAAACAATGGTCCTTCTTTTTGGGCTTC AAATTAGACATCTTTTGCTTCAGTATATGTTCCTTTGTGCTCTAGTCCTT CTCAAATTTGCTCCTTCTTTGTACTTTCATTATGACTTTTGACGTCGTCA TTTTCCATCCATTACCACTTTTTAGCGCCCTAGCTTAACTGGACTTTTTC CTCTAAAACctttgaattgttatttttcaatttgaGATATTTGAAGTCTG CTTGAAGATATAAACTGGTTTAAGATGTTTTTGAATTGCCCAGGTTTTCT TCTTCTCTGTGTGACAGCAAAAATGTTTGCTCAAATGAACAGATTTTTTT GTATGTTGTTTTTgcattaaaaagtaattttccTTGATAAAACTGAGAGG GTTGATTTTTGGGGAGAACACAGCCTTCTTATATGTCTCTAAGGAACTGA AACCTGTTCACTTTTCATTCTTCATTTAAAAGCTTTTTCCTGTCAGAAAG TCGTATTGTTTTGTTAAAGTCACACAGAAAACAATAAATCTCGGCTGTTC TCTTCTCTTTCTGCCTGAAAGAAAATTGGGGAGAAATTTAGGTCTCACTC TCATTTATTTACTATCTGATATTTGATGTGAAAACTAAAGAAAATCCTTA GAGTAAAACCAAACACTCTTGTGTTAAAGTAGAGTGTTAAACCAATAACC CAAAGCCCTAAGACAGATGCCTAACTTTGACCAATCagaattttttgaat atatAAATCCTCGCAAAATTTATAACATCTGTGGGTAACGAATTTGCCGT ATGGATCGTCTTCCGTGTTTATCTTCTATTTCCTTAAGACAAGAAGGGTA TTAGGTCTCCTATATATGAAGCCTCCGATTTTTGATAGCTTCCCTTTGTT ACATTAATACTATGTTGCGAACAGATTTTGATTTACGAAACATAGATTAG GCGATAAGGTGAAGTCGATGATAACACACTGCGATCAGAGAGTGTTGAGG GATTACAGAATTATTGAATAGCCCTGGGAAAGTACAGTCTGGTGTTCTGG ACATGTTTGTAATGAAAAGCTATGATTAAAATCCCGATTATTTTGAAAGA CAAACATTACTTTAGAAAGttggaaaaaggaaaaataatgtATTGAAATA tcatgatgaaaaatgaaaattttatgatacttcttttttttgagcttttg agGAAACAGATTtattataaatagaaaaaataacatgCTTGTGACATTCG CCTGCGAAAACGATGAACCCTTATTTTTAcgattctttttcaaaagttgg TAAATAATCCTCTTGCCCACACTTTTCCGAAGCTCTCGAATTTTGCGTCA CACTCTGGCAACTAAGAAGGGTACTTAAAAGCGAGGCGTTTGGATATAAC CAGCTTGCAAGAGTTAAGCGGCTTCTATACTTTTACCCTGATAATCGATG CACTCACGGAGGGGGGAGACTCGGGTTATCCAAATCGAAAGTTGCACCAT TTAAAACTATCAAATTGTTTGTTATTAATTTCTAATACTTTGTTGACAGT CAAGGTTATCATTTTGCTATGATGAGATCAAAAAGTAGATGGAATGGATT GAAAGATCCATCATCCTACCGATCAAAGAGATAATCATGCAGCGACAATC GATATAAGCTCCTTTGTGACATGTTAATATGTGCCTTTGAATGTTATTGT ATCAGGGACATTAATACTTCTCTGGTACAATTACATCAGAAActtcatat tttgatattttgaaaaacaaatatcGAACTATTTGATGCAGGTTAGCGGG TGACACCTAAGTGATCAGCATTGGGAAAAATTCTCAAAGAATCTCATTTT ATGATTGCATAATATTCCAAAGTGCTCGATATTTGTCTAGCCTgtgtttt ttatatattttgaatacGACTCTTCCAAAAGTAGATTGGCATTTTTGTTG AATATCTGCCAAGCTCGTTAACGGTACCATCAAACAAACGaaatttgaga ttatttttttttcataaaaacatcccataaatcttttttattagaatact TTAGTACATAGCACAGATTTCTTTTGGAAGATGGAGAAAGAAAAGGGCGT TGCCCGTTTATATAATTGTGAAATTTATTGACTGATTTCATAGTGCAAAA TTATTTAAATGAAACTCAATATTTTCGACGGGTGAAATCTTAAATCTTTG CTGAGAGTGTTGACAATATTGCTTTGCTTATAGCATATTGTTGTAATACA ATCGTCAAATGATGTTTGAAAACAAATCGTTTCAACAAACTCTGTGGATT ACATTTCATTTACGCGTTTTCTGTATTTATATTCACGTGGGCTTCACCTG GAACCTTGCTCCGTGGGAATATGCCTCTTTCCGATCTCTTTAACATTCGA TGAAAATGACCCTCAATATAAGTGATGAGTTGGCTTCTGCGTTCAGAAAT CTTTAAATATAAATGTAAACTTTTAATAATCATAATTTGTTTTCGTCTGC AATTTAATTTGGTCCATTAAAATNCTTTTAATCATCATAATTTATTTTCG TCTGCAATTTAATTTAGTCCATTAAAagtatttcaatttcaatttgtaAA AACAGTAGGTTTTTAGGTCTAATAAAAGTGGCAAAGATATGTAATTAATT TCCAGAcgaaaaacagcaaaatatgcaaaaaatgaTGGAGCTAATGAGTG AAGCAGATTTAGTTTTTTCCCAttgataatttttctcaaactttGTTAAT GATTTTCACAGACACATAATTCTCACAAAGGGAAGTGCAATATTTGTAAG ATCAAATAACCACCGCTGAAGGATAAGTTTAATGAGATTATCTAGATAAG TTCTATATgttttgttaaactttttcttttgaacaCTGGATTTGAGTTTT CCCTACATCCCATTTACGTCAATTTTTGTTCACTCGAAGCCAACGGAAGA AATGTCGTATTTCCATTCCTCCTTCCTCGCGATAGCAATATTTTCAACAT CCAGCCTGCACGAACATCCAGCCTGCACGAActcaccaacttttttttct attgacAGGTTTGGTTTCAAAACCGTCGTGCCAAATGGAAGAAACGAAAG AAGACCATGTCTTTATTTCACCACAACAACGGCCTCTTCCCTTCCTACTT CAATCAGAACCTTCAACCACGCGAGTCGTCTTGCTACCACAACGAACCTC CTCATATCTGGCCTTCTGCGTCACCCACTAACTTTCCATCCGTCACACCG ACTCAAACTTCCGGAGCNttttttttgagcttttgagGAAACAGATTtat tataaatagaaaaaataacatgCTTGTGACATTCGCCTGCGAAAACGATG AACCCTTATTTTTAcgattctttttcaaaagttggTAAATAATCCTCTTG CCCACACTTTTCCGAAGCTCTCGAATTTTGCGTCACACTCTGGCAACTAA GAAGGGTACTTAAAAGCGAGGCGTTTGGATATAACCAGCTTGCAAGAGTT AAGCGGCTTCTATACTTTTACCCTGATAATCGATGCACTCACGGAGGGGG GAGACTCGGGTTATCCAAATCGAAAGTTGCACCATTTAAAACTATCAAAT TGTTTGTTATTAATTTCTAATACTTTGTTGACAGTCAAGGTTATCATTTT GCTATGATGAGATCAAAAAGTAGATGGAATGGATTGAAAGATCCATCATC CTACCGATCAAAGAGATAATCATGCAGCGACAATCGATATAAGCTCCTTT GTGACATGTTAATATGTGCCTTTGAATGTTATTGTATCAGGGACATTAAT ACTTCTCTGGTACAATTACATCAGAAActtcatattttgatattttgaaa aacaaatatcGAACTATTTGATGCAGGTTAGCGGGTGACACCTAAGTGAT CAGCATTGGGAAAAATTCTCAAAGAATCTCATTTTATGATTGCATAATAT TCCAAAGTGCTCGATATTTGTCTAGCCTgtgttttttatatattttgaat acGACTCTTCCAAAAGTAGATTGGCATTTTTGTTGAATATCTGCCAAGCT CGTTAACGGTACCATCAAACAAAcgaaatttgagatttttttttttcata aaaacatcccataaatcttttttattagaatactTTAGTACATAGCACAA ATTTCTTTTGGAAGATGGAGAAAATAAAGGGCGTTGCCCGTTTATATAAT TGTGAAATTTATTGACTGATTTCATAGTGCAAAATGATTTAAATGAAACT CAATATTTTCGACAGGTGAAATCTTAAATCTTTGCTGAGAGTGTTGACAA TATTGCTTTGCTTATAGCATATTGTTGTAATACAAACGTCAAACGATGTT TGAAAACAAATCGTTTCAACAAACTCTGTGAATTACATTTCATTTACGCG ttttctgtattttttattCACGTGGGCTTCACCTGGAACCTTGCTCCGTG GGAATATGCCTGTTTCCGATCTCTTTAACATTCGATGAAAATGACCCTCA ATATAAGTGATGAGTTGGCTTCTGCGTTCAGAAATCTTTAAATATAAATG TAAGCTTTTAATCATCATAATTTATTTTCGTCTGCAATTTAATTTAGTCC ATTAAAagtatttcaatttcaatttgtaAAAACAGTAGGTTTTTAGGTCT AATAAAAGTGGCAAAGATATGTAATTAATTTCCAGAcgaaaaacagcaaa atatgcaaaaaatgaTGGAGCTAATGAGTGAAGCAGATTTAGTTTTTTCC CAttgataatttttctcaaactttGTTAATGATTTTCACAGACACATAAT TCTCACAAAGGGAAGTGCAATATTTGTAAGATCAAATAAACACCGCTGAA GGATAAGTTTAATGAGATTATCTAGATAAGTTCTATATgttttgttaaac tttttcttttgaacgCTGGATTTGAGTTCTCCCTCCATCCCATTTACGTC GATTTTTGTTCACTCGAAGCCAACGGAAGAACATTCGCGATAGCAATATT TTCAACATCCAGTCTGCACGAActcaccaacttttttttctattgacAGG TTTGGTTTCAAAACCGTCGTGCCAAATGGAAGAAACGAAAGAAGACCATG TCTTTATTTCACCACAACAACGGCCTCTTCCCTTCCTACTTCAATCAGAA CCTTCAACCACGCGAGTCGTCTTGCTACCACAACGAACCTCCTCATATCT GGCCTTCTGCGTCACCCACTAACTTTCCATCCGTCACACCGACTCAAACT TCCGGAGCCCCTCCACCTCACGTCACAAGCGGCGCAGGTACCCCTTCCAC ACAGTTCCCTTACAGTCAACTTCCGCCGGGCTCATACCCTATCGATCGTA GCCCAGTTACTTCTCAAGGGGGCTATGGTCTGAATGGTAGTGCTGATTGT TCTCGAGATCTTGACTACAGCGTGTCATCGGCTGGCTCGCCCACAGGGGG AACGCAATATAACACACAACCGACAACTTCTGACCATTCTGATCATTGGC AGAATACGAACAGCAGCACCAGTGTTCTCGATAACAGGCGAAAGGGAACT GTGGTTGAACATAAAAGTAGTGCGCCACCTTACAGGTAGAGAAACTTTGA AGCCCTGAATGCTGTAAGTAAAACTGGACGGACGACATAACGCCGACACC AGTGACGTTTTTTGTTGTACACCATGGCAATAAAGAAGTATGAACACTTC GCCCAATGAACTATGAATAGTGGACGGCAAGCATCAAAAGGAGCAATTTT ATTACATTTAGTGTATAGAAAtctattttcactttttgttaCGCGTTCTC GCTCTAGCAAAGGTCCCTGATAGAGTAACTCTACAAGTTCTCGACTTTCT AGTTCACGTTTGAATAAGCGAAAGTAAACCACACCCTATTAAGGGAAAGA AGGGACTTGACGAGGCGATTACTTTAgaactttcttttattttaaggcaa tttcattgtgttttgttaagaaatttttaggccgaatattttaatttatt tattattacctgtgtttatttttctatagtTTTGTTCTGTTTGTTtgaaa gtaaatatcatgtaaataatttttcataaattgtaAACTCCTATCCCTCA TATTACCcgaatttatttaattttacgGAAAAGCAAAATAATGTAGAATA TTATTGAACATAATTGAATTTTATTGACTTATGTTTTAAGAGAAAAGATG AGTTTT

Coding sequence (CDS) from alignment at sc0000724:65752..87057+

>TCONS_00029082 ID=TCONS_00029082|Name=TCONS_00029082|organism=Clytia hemisphaerica|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000724:65752..87057+ (Clytia hemisphaerica)
ATGATTTCTCTTCTTCCTCCCCCAGATCAACACCTCATCGCGCCACCTAA
CCCTCAACAATCATTCGACGATCTTCTTTCCAACGTGCAATCGAACCATA
ATCAGCCGTTCCAATCGCAAGTCGATCATGTCTTAGCCCAATTCCCGCCG
GACACTTTTAAAAACGCACAGCTTCACTCCATGACGTTCGGTGGAAGTGG
TCCGACCGGTGATCAAACGGACGCGGACTTGAACAACAACCATCCGGGAA
TGAATAATCGCCCGATCATGAACAACAACAATCAAACTAAACTCACCGAC
GATGAAGACGATTCTAGTGATGATATGGACCGCCCTTCAAAACAGAAACG
CCATCGCACCCGTTTTTCACCCGCCCAACTGAACGAGCTTGAGCGTTATT
TCAGTAAAACACATTACCCTGACATCTTCGTGCGCGAGGAGTTGGCGATG
CGCATTGGACTGACCGAATCGAGAGTTCAAGTTTGGTTTCAAAACCGTCG
TGCCAAATGGAAGAAACGAAAGAAGACCATGTCTTTATTTCACCACAACA
ACGGCCTCTTCCCTTCCTACTTCAATCAGAACCTTCAACCACGCGAGTCG
TCTTGCTACCACAACGAACCTCCTCATATCTGGCCTTCTGCGTCACCCAC
TAACTTTCCATCCGTCACACCGACTCAAACTTCCGGAGCCCCTCCACCTC
ACGTCACAAGCGGCGCAGGTACCCCTTCCACACAGTTCCCTTACAGTCAA
CTTCCGCCGGGCTCATACCCTATCGATCGTAGCCCAGTTACTTCTCAAGG
GGGCTATGGTCTGAATGGTAGTGCTGATTGTTCTCGAGATCTTGACTACA
GCGTGTCATCGGCTGGCTCGCCCACAGGGGGAACGCAATATAACACACAA
CCGACAACTTCTGACCATTCTGATCATTGGCAGAATACGAACAGCAGCAC
CAGTGTTCTCGATAACAGGCGAAAGGGAACTGTGGTTGAACATAAAAGTA
GTGCGCCACCTTACAGGTAGATGATTTCTCTTCTTCCTCCCCCAGATCAA
CACCTCATCGCGCCACCTAACCCTCAACAATCATTCGACGATCTTCTTTC
CAACGTGCAATCGAACCATAATCAGCCGTTCCAATCGCAAGTCGATCATG
TCTTAGCCCAATTCCCGCCGGACACTTTTAAAAACGCACAGCTTCACTCC
ATGACGTTCGGTGGAAGTGGTCCGACCGGTGATCAAACGGACGCGGACTT
GAACAACAACCATCCGGGAATGAATAATCGCCCGATCATGAACAACAACA
ATCAAACTAAACTCACCGACGATGAAGACGATTCTAGTGATGATATGGAC
CGCCCTTCAAAACAGAAACGCCATCGCACCCGTTTTTCACCCGCCCAACT
GAACGAGCTTGAGCGTTATTTCAGTAAAACACATTACCCTGACATCTTCG
TGCGCGAGGAGTTGGCGATGCGCATTGGACTGACCGAATCGAGAGTTCAA
GTTTGGTTTCAAAACCGTCGTGCCAAATGGAAGAAACGAAAGAAGACCAT
GTCTTTATTTCACCACAACAACGGCCTCTTCCCTTCCTACTTCAATCAGA
ACCTTCAACCACGCGAGTCGTCTTGCTACCACAACGAACCTCCTCATATC
TGGCCTTCTGCGTCACCCACTAACTTTCCATCCGTCACACCGACTCAAAC
TTCCGGAGCCCCTCCACCTCACGTCACAAGCGGCGCAGGTACCCCTTCCA
CACAGTTCCCTTACAGTCAACTTCCGCCGGGCTCATACCCTATCGATCGT
AGCCCAGTTACTTCTCAAGGGGGCTATGGTCTGAATGGTAGTGCTGATTG
TTCTCGAGATCTTGACTACAGCGTGTCATCGGCTGGCTCGCCCACAGGGG
GAACGCAATATAACACACAACCGACAACTTCTGACCATTCTGATCATTGG
CAGAATACGAACAGCAGCACCAGTGTTCTCGATAACAGGCGAAAGGGAAC
TGTGGTTGAACATAAAAGTAGTGCGCCACCTTACAGGTAGATGATTTCTC
TTCTTCCTCCCCCAGATCAACACCTCATCGCGCCACCTAACCCTCAACAA
TCATTCGACGATCTTCTTTCCAACGTGCAATCGAACCATAATCAGCCGTT
CCAATCGCAAGTCGATCATGTCTTAGCCCAATTCCCGCCGGACACTTTTA
AAAACGCACAGCTTCACTCCATGACGTTCGGTGGAAGTGGTCCGACCGGT
GATCAAACGGACGCGGACTTGAACAACAACCATCCGGGAATGAATAATCG
CCCGATCATGAACAACAACAATCAAACTAAACTCACCGACGATGAAGACG
ATTCTAGTGATGATATGGACCGCCCTTCAAAACAGAAACGCCATCGCACC
CGTTTTTCACCCGCCCAACTGAACGAGCTTGAGCGTTATTTCAGTAAAAC
ACATTACCCTGACATCTTCGTGCGCGAGGAGTTGGCGATGCGCATTGGAC
TGACCGAATCGAGAGTTCAAGTTTGGTTTCAAAACCGTCGTGCCAAATGG
AAGAAACGAAAGAAGACCATGTCTTTATTTCACCACAACAACGGCCTCTT
CCCTTCCTACTTCAATCAGAACCTTCAACCACGCGAGTCGTCTTGCTACC
ACAACGAACCTCCTCATATCTGGCCTTCTGCGTCACCCACTAACTTTCCA
TCCGTCACACCGACTCAAACTTCCGGAGCCCCTCCACCTCACGTCACAAG
CGGCGCAGGTACCCCTTCCACACAGTTCCCTTACAGTCAACTTCCGCCGG
GCTCATACCCTATCGATCGTAGCCCAGTTACTTCTCAAGGGGGCTATGGT
CTGAATGGTAGTGCTGATTGTTCTCGAGATCTTGACTACAGCGTGTCATC
GGCTGGCTCGCCCACAGGGGGAACGCAATATAACACACAACCGACAACTT
CTGACCATTCTGATCATTGGCAGAATACGAACAGCAGCACCAGTGTTCTC
GATAACAGGCGAAAGGGAACTGTGGTTGAACATAAAAGTAGTGCGCCACC
TTACAGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016543XLOC_016543Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
OtpTCONS_00029082-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029082-exon-sc0000724-1491911889:65752..65784TCONS_00029082-exon-sc0000724-1491911889:65752..65784Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1510915933:65752..65784TCONS_00029082-exon-sc0000724-1510915933:65752..65784Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1575043694:65752..65784TCONS_00029082-exon-sc0000724-1575043694:65752..65784Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1491911889:72481..72619TCONS_00029082-exon-sc0000724-1491911889:72481..72619Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1510915933:72481..72619TCONS_00029082-exon-sc0000724-1510915933:72481..72619Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1575043694:72481..72619TCONS_00029082-exon-sc0000724-1575043694:72481..72619Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1491911889:78371..78552TCONS_00029082-exon-sc0000724-1491911889:78371..78552Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1510915933:78371..78552TCONS_00029082-exon-sc0000724-1510915933:78371..78552Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1575043694:78371..78552TCONS_00029082-exon-sc0000724-1575043694:78371..78552Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1491911889:79161..79615TCONS_00029082-exon-sc0000724-1491911889:79161..79615Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1510915933:79161..79615TCONS_00029082-exon-sc0000724-1510915933:79161..79615Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1575043694:79161..79615TCONS_00029082-exon-sc0000724-1575043694:79161..79615Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1491911889:85901..87057TCONS_00029082-exon-sc0000724-1491911889:85901..87057Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1510915933:85901..87057TCONS_00029082-exon-sc0000724-1510915933:85901..87057Clytia hemisphaericaexon
TCONS_00029082-exon-sc0000724-1575043694:85901..87057TCONS_00029082-exon-sc0000724-1575043694:85901..87057Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000724supercontigsc0000724:65752..87057 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.62192 0.539277 2.01008 2.43863 0 0.701951 0.612245 0.341117 0.675489 1.06969 1.40199 0.229044 1.56491 2.61824 7.85272e-06 0.723131 0.403515 3.8047 2.31972 3.17477 2.39014 3.88577 1.94286 1.43715 5.45479 8.64682 0 0.166758 0.145583 0.750822
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000047HTH_motif
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Blast
BLAST of TCONS_00029082 vs. Swiss-Prot (Human)
Match: OTP (Homeobox protein orthopedia OS=Homo sapiens GN=OTP PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.881e-25
Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 3
Query:  678 RHRTRFSPAQLNELERYFSKTHYPDIFVREELAMRIGLTESRVQVWFQNRRAKWKKRKKTMSLFHHNNGLFPS 896
            RHRTRF+PAQLNELER F+KTHYPDIF+REELA+RIGLTESRVQVWFQNRRAKWKKRKKT ++F     L P+
Sbjct:  106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPT 178          
The following BLAST results are available for this feature:
BLAST of TCONS_00029082 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTP3.881e-2579.45Homeobox protein orthopedia OS=Homo sapiens GN=OTP... [more]
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