TCONS_00028915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028915
Unique NameTCONS_00028915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1398

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028915 ID=TCONS_00028915|Name=TCONS_00028915|organism=Clytia hemisphaerica|type=transcript|length=1398bp
gggaaaaagaaaaacgtgaGTGTTAAACGTAAATATGCTACAAAGACGTT
GGTACTAAGCCAGATAAATGTCTCAATTGATTGTTTTCTTATCTGATTAA
TTAAACATGAAAATGTCATTagaaataaaaacacaaaacttAACGTCCAC
TTGTGAAAGACAAGTATTTGTTTGCTTGATAAATACAAAGCCATGTGTTC
GGTTGATGAGTTTGTGTGTTTATAGCTTGCCATAGTTGGAGGGATTTATT
TACTACTAGCCACTTTATATTAGTAGGTTCGGTTGAGGCAGAATCAGACG
TGCTATGAGCATCATACATGAAGGGCAGGGAAGCAACTTCCGTGAGGCAC
GGAGGATTCCAATTTCGAATAAGCATGTCTTCCAATTGCGGTTATGTTGT
CTTGCGGAAGTGCCCTGAtatataacatgaaaaccaaCTCGCTTCTTTCG
ATTTTTTATTCTCCAAATATTTCCAAGTATGATTTGCTAGAAAACGACCA
GCTTTCGAAAGATTTACTCTGCTTAATGTTCTAGGCTTGAAATTGTCACC
AAAGTGTGAAGATGTTGGCGGAAATCTCAGCAGTCGCAGTCTTCTCAAGA
CAACTCTTCAAACCAGGAAGTAAATTCCTCTTGCAACAGATTTTGTCAAC
TTCTACAAGAGCAGATACAACACGAAATCCAAGACCTGGAGAAGTGGATG
GGAAAGACTACCACTACTCAAACAAAGAAGAAATGTTGAAAGCGATCGAA
AATGGAGAATTTTTGGAAAGTGCAGAATTCTCTGGCAATGTGTATGGAAC
AAGTAAGAAAGCAGTTCAAGACGTTTTAGATTCCGGAAAAATTTGCATCA
TGGACATCGATTCACAGGGAGTTAAGAACGTCAAGAAAGTGAATTTCGAT
TGTGTTTTGGTTTTTATCCAACCTCCTTCCATCGAAGAATTGGAGAGACG
TTTGAGAGGTCGAGGAACAGAAAGTGAAGAAGCCATACAAAAACGACTGA
ATACCAGCAAGAAAGAATTTGAATACGCTGAACTTCCCGATTCGTACCAC
CACAAGGTCATCAACGACGATTTAGAAAAAGCATATATCGATCTAAGGGA
TATCATATCAAAGGACATTCGGAAGTTAGAATGAAGATGACTTTTACTGT
AGGTTAGTTTTATTTAACATCAAATCTGGTATATTTTTTATTAGGATGGA
GGTACTGTAGATAAACAGTGATCgatcttttttcacttttttgtattttt
tagttCTTTGCTTCTAAAGTAAGTGCACCCCactttgatttaaaattttt
attatggTTGTCAATAGCATTTAGTATTTATATTTTGGTCCCATCAATTA
GTTTTATTATTATGATATAGATAGTtcagtaaaaagaaaatattatct
Run BLAST on NCBI

protein sequence of TCONS_00028915-protein

>TCONS_00028915-protein ID=TCONS_00028915-protein|Name=TCONS_00028915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MLAEISAVAVFSRQLFKPGSKFLLQQILSTSTRADTTRNPRPGEVDGKDY
HYSNKEEMLKAIENGEFLESAEFSGNVYGTSKKAVQDVLDSGKICIMDID
SQGVKNVKKVNFDCVLVFIQPPSIEELERRLRGRGTESEEAIQKRLNTSK
KEFEYAELPDSYHHKVINDDLEKAYIDLRDIISKDIRKLE
Run BLAST on NCBI

transcript from alignment at sc0000715:2306..13340-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028915 ID=TCONS_00028915|Name=TCONS_00028915|organism=Clytia hemisphaerica|type=transcript|length=11035bp|location=Sequence derived from alignment at sc0000715:2306..13340- (Clytia hemisphaerica)
GGGAAAAAGAAAAACGTGAGTGTTAAACGTAAATATGCTACAAAGACGTT
GGTACTAAGCCAGATAAATGTCTCAATTGATTGTTTTCTTATCTGATTAA
TTAAACATGAAAATGTCATTAGAAATAAAAACACAAAACTTAACGTCCAC
TTGTGAAAGACAAGTATTTGTTTGCTTGATAAATACAAAGCCATGTGTTC
GGTTGATGAGTTTGTGTGTTTATAGCTTGCCATAGTTGGAGGGATTTATT
TACTACTAGCCACTTTATATTAGTAGGTTCGGTTGAGGCAGAATCAGACG
TGCTATGAGCATCATACATGAAGGGCAGGGAAGCAACTTCCGTGAGGCAC
GGAGGATTCCAATTTCGAATAAGCATGTCTTCCAATTGCGGTTATGTTGT
CTTGCGGAAGTGCCCTGATATATAACATGAAAACCAACTCGCTTCTTTCG
ATTTTTTATTCTCCAAATATTTCCAAGTATGATTTGCTAGAAAACGACCA
GCTTTCGAAAGATTTACTCTGCTTAATGTTCTAGGCTTGAAATTGTCACC
AAAGTGTGAAGATGTTGGCGGAAATCTCAGCAGTCGCAGTCTTCTCAAGA
CAACTCTTCAAACCAGGAAGTAAATTCCTCTTGCAACAGATTTTGTCAAC
TTCTACAAGAGCAGGTAAATATTTACTTTTCATTTTTAACAAAGGCTCAA
TTCAAAACTCTTGAATTTGTTGATTGCAGGTCTATCCAACAAGGTTTCCA
TAGCTGATTAATCTCAATTTCTTTTTTGTTTTGACTGGGCCATTCCAGAA
TTTGTTTGTAACAGGGGGGCGGACGACACAGGATTTCCGAGGGCAAAAGT
TTTCACCAAACTTCGAAATTTCCAAGGCGAGAGAAGAAAATGTGTGAATT
TCCAAGGCAATTGAATTAAAAAAGGCAAAAAAGAGTGGAATTTCCGATGC
ATTTTGCAAAAGTACATGGATTTTTATTGGAATTTCCGACCACCACTGGA
AAAGGAAAATTATTTCTGAGGCTAGAAAAAATTGAAAAATGCACGTCGTC
CGACGGGGGGTAACAAAAATTTTCTGGAATGGCCCACTGCGTTTGGATTT
TTTCTCCAGAATCATGTCCCATCATAAAATCCCTTTCGTCATGCAGGCTA
GCTCTAAAGCTCTAAAACAGCATATAGTAACTTAAAGACCAGAATATTAT
GATTCTTCAATTCTTCGTCCCGTGCCCGCCATTAATGCATTATGCAATCG
AACTTTTTACTGACCGAACTAATCAAACTGCTATTGCTTCAAAAATTGTG
AGTGTTCGATTAGGTTCGATTAATTTTTTTAATCGAACTTTAATCGTTCA
ATGGAGTTCGATTAGTTTGATTGTTCGATTGGTTCGACAAGTTCGATTGA
TCGGGTCTGGATTATGATGGGAAAGATCCGAACCTGCGAACAGCGCCAAA
AAAAAAACCCGACAATTTTACCGACTTTCCGAATCGGGTTTTCTTGTAAA
TAAACAGTTGGTCAGACGACCCGAACGCAATATATTTTTGATTGCCGCCT
TTTCTATTTTTCCTTTTTTTTGCAAAAGTTCTAGGAATGAAAATAAAGGT
ATAATGATCATTGAATACTATCCACTGATGATCTGCGGCACTATCAGTTA
GCCACACTAGCGTCCCGCCAAAATACGTACCAAAGATTAATGCTGCGAAA
GCGCTATATCGTTTACTTGACTCTCAAGCAAAAAAATGCACCGCAAAACT
TCTAAAGGGATTCATGAAAAAAANNNAGACAAATTTTGGTTGGTTGATTT
TGGCTGCTGCACGTTTTATTTTGTTTCCAACTTTCAAGTTTTAATNNACT
ATCGTAGAACGAAGCTAGAATAGACCTTTTTTTAAAGAGGCAGCTATGTT
GAATAATTATATACTCCAGCATAAAAACAATGATACAGCCAGGCATAATT
TTTAAAATATGCATGATACAGTAATTATGCATGGCTGAATCATTGTTTTT
ATGCTGGAGTACATAATTATTCAACATGGCTGCCTCTTTAAAAAAAGGTC
TATCGCTTTGCATACTCTTCGCTTGAGAAAAAGATGACAGATTGAAGTTT
TTCACACGCGCGGGAGCTCGCAGGCGTTCTGCGAGCGTTCTCGGCTCAAT
CCTTGGACTGCGCTAAAAATGGTAGACCTAGCTGAGATAGATCATTTCGA
TGGAAGTTGTTGGAATGTTTACAAGGGGGGGTTTCAGGGGGTACCCGATT
CCGCAATTCCGCCAAACCGTCTTAAATTGAACGAAAATTTCGTCACCGAA
AATTCCTTTGAAATTCAATATACCAATTCTGAAATTCCGCAATTTTTTTT
GCTAAATTCCGTTTTTCCTCACTAAAATTGTCTAATTTTCCGTCTCCGTC
AGAGAACCCAATTTCCGTAATTCCGTCTAAATTTTTGCCAAATTCCGCCA
CTCCGTCCGAAAAAAGGGCCGATTCCGCTCCTCCGCCAAACGTAAACCCC
CCCTTACAAGGCTCTTGACCGAAAAAACTAAGAAGCTTTTATTTTCTGAT
CATCGTTTTAATCTGCGATGAAGTGTTATAAAATTCTTTATAGAAAGTCT
CCTATGAAGAGGCTCCAAAAAAATTTAGAAAAAAGTCATTAAAAAGTATG
TCATTTTTATCTTAACAATTTCGTAAACTACGTCCACAACCAGCCACAAC
CACGGAGCTCTGACTTTTAGTTTTATCTTTTGTTCTCACTCATTTGGTTT
CCGTAATAAAAAGAAAGTTGTTATTGTAAACTTTGAACATGCTTAAAATC
GAGGTACTTCCGCCACAACTGCCTGTACCAATCAAAGCAGCAAAATTTCA
AAACAAATTTGTTGTCAAAGAGATTTAACAGTTAGTGAAAATACAGGCCA
GATATCAACAGTCCCATGTTTCAACCAATCGTCCCAAGTTAGAATAATTG
ACGGTACGCAGCTCTACTCAAAGCTCTATTTTACCATTGTAGAATCTCAT
ATATATTTGCCGCACAAGTATTTTTGGCGAGTTACTCGCCTATAAAATTG
CGGGGTGATGAAAAATTATGCGAGATCTTAAAAATTTCATGATACAGTAG
CGGGAATTCAGATGTTTCTTGATGGCTGCTGGATGTGTAATCTCAAATTC
AAAAAAGTTATATTAAACATAATTATCCATATGACATCATTATAATTAGG
AGATATAAATTTTGTAAATTAGGTTGTTTTGATTTAAATTTGTATTTTAA
TGACCAGTCATGTTTGACTCCACTGATGCAAGTTACCTGGCAAGTTATTG
GTTTTTTCCTATCTCTCTGAAGAAAGGAGGAATTTGATGCAAGAGTTGTT
AACAATGTGGGCATAAAAATCCTTGAATAGAAGAAGAGCTTATGATCATA
AATCTCTAGTAAAAAATTGGAGATTTGATATTTCACAGAAAAGTGCTACC
AAGGGGTATTTCGTATTTCGGGTCCCATATCTCTGAAAGACTTTACCGAT
TGCCTTGAAATTTGACGACCTTCTTAACCAAAGGTTGAACTACCACTGGT
GTAAAAATGAACGTTACAGCAAAAGTAGAAAAAATGGTTAATTTTTGCAA
TCGCAAATTTAACTGCTAAAAGTCGCAAATTTTTCAACCAAAAATATATT
CAAATCGCTTTTGATGGGCATAAATCTAAGTGTACGAGTAAAGAAAACTC
TTCAACAGTTTGGAAAAGATTGTTTAAAAATTCATCTTATCAACTCTCCA
TACACAATAGCAGCAGAGATTTTTGCTAGATCAGTTTTACCAAACTGAAT
TTTCTTTGAAAGCAAAAAAAGAAAAATTAAACCCGTCTGTTGACCCCATA
CTTTGTTAGCACATCAAAGGGAAACTACCAATGAAAACTTTCTCTGATTG
TAAATTACTTTAATTGGATTAAATTTCGCAAGGTCAAATTTCACGAGCGA
AAAGAATTGTGAAATTTTCTGGGTTTAATTTTGCGAGTCAGAGTTTTGAA
AAATTTGGGGTGGATTTAATTTCGCCAATTAGCCTGAAAACAGTTGAAAA
ATTGACATTTTTGCCACAAATAGAGACTTTTGACTAGTTTCTCCACCAAA
AATGTGATTTAAAAAATGTTGTGGCGGATTTAATTTCGCGAAAAATGGCA
AAAATTTGCAAAATAGCGAAATTTAATCTTGCAAAAGTTAATCTGTTTTT
AAATTACTTTAATCGTAGAAATTTTAGCGAGACTAATTTTAGCGTTTTAG
GGAATTTTCCCTATTTTCTCTAAAATAAATCTTGCTTAAACATGCCGAAT
CGACAGATCGCTAAAATTTATTCGCACGACATTTCTTGTTATATTGCCTT
GATACATTTTTATCAATAGGAAGGGTTTCAGTGCAAAGAAATGCTAGAAA
ACGAATTCAGTCAATAATGTAATACGAGTATTCGCTAAATTTTTACACGC
ATAATTTTTTGAAATTGTGATACGCTAAAATAAATCCAAAAAAATCAAGA
TTTTCCTGACTCGCTAATATACGCTAAAATTAGTCTCGCTAAAATTTCTA
CAATTAAAGTAGTTGACTTTACAACTTTACAACTTTTGTACACCCTAGGC
TGCTGATATGCCATCGAAATCTCAAGTAAATCTCGAGGGGGCTTAAAATG
ATTGACCAAGAGAGCTCTCACTTGAAATAATTTGACAATAAAATATTTTC
ATAAATAGCAAACTCACTAAAATGATGCTAAAGAGAACAAAATAACATTT
TGAATTTACACATACTTCAGCATACTTTGCAGTGTGGTTTGAACCTGAGT
TATTCCCTCTGTTAATTATTTAAGTCCCACACCTATGGCTTATGTGCTAT
AAGAAAAGAGGCAAAGAGAAAAGATTTGTCTTTAAGTCAATTGAAATGAT
ATGTTGGACGGTGAAAAAGAATGCGGCTATTATATTTTGATTTTTCCCAA
GTCAATTGAAATGATTACTACTTAGATTATTAAAACACAAAATAGAGAAA
ACTCAACGTTACAGCATGATTTTAGCTCATTTGCTCATTCCTTGTGTTGA
ATGAATATTATTGTAACCCTGACTTTAGAAGAGTAGTGTAGTAGGAGAGG
CCAAGTGTGATCCTGTTAGCAATTTTTGTCTGGGTAATAAGAAATACAAG
ACAGGGTAAATTTTGCTTTTGGATGGAAATCATCTATGTCATGATCTCTG
CTTTAGTTAAAAGATTTTGAAATACTCGTCCATTAAAATCATGCATATAT
AAATGTCTTTCTACCATGTTCTTGTTTATACCAATTGATCTAATTATTTC
CTAATTAACACAACATCATCTCGTAGATCACTTCCATTCTATGTAGATGT
GTTTGTGTTTGATTATCTTCTTCACATCATAGTGTTAAGAATGTCTGAAG
TAAAAAAGTTGTTGGGTAGTCTGAAGACTTAAAAAAGGTCCTCGACATGG
ATGAAATATTGTTTATCAGTTTGTTTGTTTTTAAGCTTAAGAAAACACTA
TTTGAACAGAACAATGTTTGTTTTAATAGGTTACGATGATGTAATGTTTT
TAAAAAGTCAAGTCCCATCATGATTAACAGATATCTGTCTTTAGACTAAC
CGTTTCACAGAAACATGAGATTTCGAAATTTTATAGTTGCTAAGACAATT
ATTTGTTTATCAGATAGACTCATAGCCTTGTAAAAGGAGTTTTGTCACAT
TTTTTATTTGTAGGATTTTGGATTGAAAGTTAATCAGCCTGAAATTATTT
GATAGAACATTGTTTTTGGTATTAGGCAAGTTATCTTGAACTTATAGTGA
AGATGGGTGCTGGACTTTGTGGTGGCTCGAAGGTCCAAGTGGCAGGTTTG
TTAAATGTTTTTATTGATAAGATCATAGAAAGATTTATCAGTGTTTCGAG
ATTATCTCTTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAAAGTCTTCTTTCAAACCTTTCCAAGCAAAGATTTTAACA
ACCAACTTTGTGCCCTCTTTCTGCCTACTCTAACAATTAGAATAGGCAGG
GCAGAAAGTCGGCTTTCTGGGTTTAGAAACACTAACTGGCAGCACTCTAT
GTAGATATTTTGCTTGCTGTCACTCAACCTGATATGTATGGAATGTTATA
CAAAGTGATGACATTCACCGGAAGCATTTGTCAAGCACCTTTTAATCCAT
TCTCTTCATTTTTGACCCACAGATACAACACGAAATCCAAGACCTGGAGA
AGTGGATGGGAAAGGTAAGATATTGCTTTGTTTACACGTGTACACCATTA
TTGACACTTCCATGGAATTGAATGTGTAAATTCTTTTAATCGTGGCGATA
ATCTTATTTATAGATATTTGTGTTGTAAATTACTTGAACATACACAGTAA
TCGAAAAATACACTCTACAACAGTCTAAAACGGGTGAACTGTAAACTGAG
ATATGATGTTTGCATTATTAAATAATGAAAAAAAAGTAATGACCATATTG
TAACCTTTTCACGTTCACGTTTTTTTTTATAAAATCAAACTATACCGGGT
GCGCCACAAAAAAGTTTCTCTCTTTGAAACTGAACTTCTCGAAATCCAAA
AATTTTAAAAGGATCATTCCTATTTCATTGGAAAGAAGAAAGATAAATTT
AAATTTTGATGGGTTATTTAATAAATTCGGTTCATTAGATCAAAAGTTAT
GCTAAATTGAATAAAAAATTTACTTTCAGAAAGTGCCCGAAAACGTTAAA
AATCGACCTATCAAAATTTTATTTTAAAACTAGCAATCGCAATAGGCTTT
ACATGATTAAGAACATTTTTCAGTAATTAAATACATAAATTTTGAAACTG
ATGGGTCAAAAGGGTTTAGAATCTTCATCAAAATCAATTTAATTTACTTT
TACCGAGATTTTCTTAAGATTTTTGGTTGTAGACAGGATAAAGTCTATGT
AAGGCTGGATGTACCTCGAAACCCATATTTGATGTATTTTTCTGAGTTTT
ACAAGATTTTTTGGCTTTTTTCGACAAACTTTCTTCCTTTTAATGTAATT
CATCAACCTTCCTTTATATAACATAAGGTCATTTAGACAGCTAATTATCC
TTTTTGATGACTAAAACGAAAATACTGATGCTTCATGTAATTATGCTTCT
GTTTAATTTGATAGGTCGATTTTTAACGTTTCTGAGCACATTCAGAAAGT
AACTTTTTTATTCAATTGAGCATAACTTTCGATCTAATGAACCAAATTCA
ATAAATGACCCATCAAAATTTAAGTTTATTTTTCTTCTTTCCAATGGAAA
GGAATGGTCCTTTAAAATTTTTTAAAACTTCCAGAAAATTAGTTTTAAAG
AGAGAAACTTTTTTGTGGCGCACCCGGTATAAGAACATAAGGCTTCCATG
GCCAAAATGAACAAGTTAAGAACATTTTAAGGATTTGCGTACTTAAAAAA
CCCTATTTCTTAGAAGATTGGTCAAAAATGCTCACAAAAAAAAATGGTGT
AAAAAGAACATGTTTAAGAACATTTTTAGGCTTAAACTCAAAAGTCAAGA
ACATCTGAAGGCTTAAAAAATATAGGATGTTCTTGTAAAAAAACGTGTCT
TTCAATCTTGTTTATAGACTACCACTACTCAAACAAAGAAGAAATGTTGA
AAGCGATCGAAAATGGAGAATTTTTGGAAAGTGCAGAATTCTCTGGCAAT
GTGTATGGAACAAGGTATAAAATAATTATTTCTCATTTTGATGGCTCTTC
ATCTGACATCTCTATGTCGCGAAAATGATTAAACGTATTTCTATAAGTAA
AATGCTTGTTTGTATTTTTCTTCCTCAATAACCCTTAGACTACGAGAAAT
GCGCCCAAAATAGAAACTCCTTAAACCCTATTTAGCTCGGTCAAACTATT
AAGTTCAAGACTTTTTGCCCTATCGATGATGTAAGTTAAAGGTACGAGTA
AACCTGTTAAATGGGTTAAGAACAAGCATAAAAGTAGCTTTTCAAGGGTG
CCAAAATGAGTACCCTCAGATACCTCAGAATAACCCTCAGATATAATTAT
GTCGTTGATTCGGTTTTCAGTAAGAAAGCAGTTCAAGACGTTTTAGATTC
CGGAAAAATTTGCATCATGGACATCGATTCACAGGGAGTTAAGAACGTCA
AGAAAGTGAATTTCGATTGTGTTTTGGTTTTTATCCAACCTCCTTCCATC
GAAGAATTGGTAAGTGTTGGCTGTTAGAATCTCATCTTCTGCATCTACTT
CAAACTGTGGGCTAACATAGCGTCAGCCCCCCTGTTGCTAGTAGGGGGGT
TACACCCTCCAAAAAGCCAAAAAGGGTGGGAGCTAAAGATGTTTCAAATA
TTTGGGGGACCTAATGTACCTGGGGAGAGCTGAAATCTCGTCATTCAACA
TGGGGACTTCATCTTAATGGTTGGCTTCAATTACTCAAATTACTCGTGAA
GCTGGAAAATTTGTTTTTATATTAAATGAACAAAAGGTTTTATCTTAACC
TTCGAACTGCAACACAATTTACATTGAAAACACTATTTTTTGGGTGGAAC
AAATTTTTAAAAGGTTGAGGGTCGAAAGCCATGGGGGCTACCAAAAATGT
CATGAATATTTTGGGGGACTTAAACCCAGGGGGGCCTAATTTTCGTCTGG
GACCTAAACCCAGGCTGACGCTATGGGCTAAATATCATAACGTTAGTTGT
AGCAGTATGGTCAATAGCAGTTAAATCTCACCCCTAGCATTTGGTATATT
TTTGTGTATTCCCCACATAACTAGACTGTACTATATTGAAACGCAATTTT
TAACCAATCTTCACCAGGATACATTGTATCACGTGCTTCAGTGAAAATAA
TAGAATCACAAAATAGAAAATTTGTGAAATGAAATATCGAAAAAAATCAC
AATTATAACAATTGCTAATAAAAAATTGTAAGTTAGTACTTTATCATTCG
ATAGTCCCTGATTCCAATTTTTCATTCGATCGATGTCCACAATGTACTTT
CGTTGACAGGAGAGACGTTTGAGAGGTCGAGGAACAGAAAGTGAAGAAGC
CATACAAAAACGACTGAATACCAGCAAGAAAGAATTTGAATACGGTAGGT
CCTCCACAATCAAAGTAAGCATAGATTGAGAAGATAGCAATGTAAAGTCT
TGACATTAGATTTGTTGAAGGTTTCAACTGCCGGTAGAGGACTTAATTAT
CTGTTTAGTGATAATTGAATGTGTTAAATTCTTTTTGGGTAGCTCCTGCT
GGAGAGTTACATACTCCAAAATGACCCATGTCATCCAAAGATATTTTTGA
ATGGTCTTTAAGCTCGGGGACCAAGAAAATGTTGCTACAATTTTTAACAA
TTGCAAAGTTTTCAAGGTAATTTTGAAAGTCGATTTAATTATACTCACTC
ATAATTTTGCCGGTCGATTCCACTTTCTCTTAAAATATTTCTTGGTACAA
CAATTAGTGTAGCAACTAGCATGTCTATCATCACCCTTTTTCAGCTGAAC
TTCCCGATTCGTACCACCACAAGGTCATCAACGACGATTTAGAAAAAGCA
TATATCGATCTAAGGGATATCATATCAAAGGTATTTCCATATTTATTCTA
ATGGCTTACATATCAATCTTAAGGTTTGGTAAGTTCCATTTGTGGGGTTG
GTCTCCTTGTCGTTTGTAGTATGAAACGTGGCCAATCTCAACGTCAAAGA
TGGGGCATCCGTCGAACTATTAGTTTTATGAACGGCGTTTTGTATTCCAA
TTAACGACGATAAATAACTGTAGCTCTCCATTCACACTACGTTAAAAAAA
TTAGACCGAAATACCTCGAGCCAAAATATCGACTCTTCTTCTAAAAAGAT
TTTTTCTTTATTAGAAATTATTTTCCTGGTAGTAGGGGGCCAAGCCTGGG
GTTCCGTGACATCTTTTATACGACCTAGCCATTTTTAGTCTATTCAAAAG
AACAGTATATCACAAGATATTTTTGAGAGGGAGGACGCGGATTAGGCTTG
GGAAAACTTTTTATGGCCAAAATAGTGACGCCATAGGCAAAACTGCAAGG
GAAATAAGGGGTATAGAAATATGACTAATCTTTTCCTTTATGTTTTTCAG
GACATTCGGAAGTTAGAATGAAGATGACTTTTACTGTAGGTTAGTTTTAT
TTAACATCAAATCTGGTATATTTTTTATTAGGATGGAGGTACTGTAGATA
AACAGTGATCGATCTTTTTTCACTTTTTTGTATTTTTTAGTTCTTTGCTT
CTAAAGTAAGTGCACCCCACTTTGATTTAAAATTTTTATTATGGTTGTCA
ATAGCATTTAGTATTTATATTTTGGTCCCATCAATTAGTTTTATTATTAT
GATATAGATAGTTCAGTAAAAAGAAAATATTATCT

Coding sequence (CDS) from alignment at sc0000715:2306..13340-

>TCONS_00028915 ID=TCONS_00028915|Name=TCONS_00028915|organism=Clytia hemisphaerica|type=CDS|length=4011bp|location=Sequence derived from alignment at sc0000715:2306..13340- (Clytia hemisphaerica)
GACATTCGGAAGTTAGAATGACTGAACTTCCCGATTCGTACCACCACAAG
GTCATCAACGACGATTTAGAAAAAGCATATATCGATCTAAGGGATATCAT
ATCAAAGGAGAGACGTTTGAGAGGTCGAGGAACAGAAAGTGAAGAAGCCA
TACAAAAACGACTGAATACCAGCAAGAAAGAATTTGAATACGTAAGAAAG
CAGTTCAAGACGTTTTAGATTCCGGAAAAATTTGCATCATGGACATCGAT
TCACAGGGAGTTAAGAACGTCAAGAAAGTGAATTTCGATTGTGTTTTGGT
TTTTATCCAACCTCCTTCCATCGAAGAATTGACTACCACTACTCAAACAA
AGAAGAAATGTTGAAAGCGATCGAAAATGGAGAATTTTTGGAAAGTGCAG
AATTCTCTGGCAATGTGTATGGAACAAGATACAACACGAAATCCAAGACC
TGGAGAAGTGGATGGGAAAGATGTTGGCGGAAATCTCAGCAGTCGCAGTC
TTCTCAAGACAACTCTTCAAACCAGGAAGTAAATTCCTCTTGCAACAGAT
TTTGTCAACTTCTACAAGAGCAGGACATTCGGAAGTTAGAATGACTGAAC
TTCCCGATTCGTACCACCACAAGGTCATCAACGACGATTTAGAAAAAGCA
TATATCGATCTAAGGGATATCATATCAAAGGAGAGACGTTTGAGAGGTCG
AGGAACAGAAAGTGAAGAAGCCATACAAAAACGACTGAATACCAGCAAGA
AAGAATTTGAATACGTAAGAAAGCAGTTCAAGACGTTTTAGATTCCGGAA
AAATTTGCATCATGGACATCGATTCACAGGGAGTTAAGAACGTCAAGAAA
GTGAATTTCGATTGTGTTTTGGTTTTTATCCAACCTCCTTCCATCGAAGA
ATTGACTACCACTACTCAAACAAAGAAGAAATGTTGAAAGCGATCGAAAA
TGGAGAATTTTTGGAAAGTGCAGAATTCTCTGGCAATGTGTATGGAACAA
GATACAACACGAAATCCAAGACCTGGAGAAGTGGATGGGAAAGATGTTGG
CGGAAATCTCAGCAGTCGCAGTCTTCTCAAGACAACTCTTCAAACCAGGA
AGTAAATTCCTCTTGCAACAGATTTTGTCAACTTCTACAAGAGCAGGACA
TTCGGAAGTTAGAATGACTGAACTTCCCGATTCGTACCACCACAAGGTCA
TCAACGACGATTTAGAAAAAGCATATATCGATCTAAGGGATATCATATCA
AAGGAGAGACGTTTGAGAGGTCGAGGAACAGAAAGTGAAGAAGCCATACA
AAAACGACTGAATACCAGCAAGAAAGAATTTGAATACGTAAGAAAGCAGT
TCAAGACGTTTTAGATTCCGGAAAAATTTGCATCATGGACATCGATTCAC
AGGGAGTTAAGAACGTCAAGAAAGTGAATTTCGATTGTGTTTTGGTTTTT
ATCCAACCTCCTTCCATCGAAGAATTGACTACCACTACTCAAACAAAGAA
GAAATGTTGAAAGCGATCGAAAATGGAGAATTTTTGGAAAGTGCAGAATT
CTCTGGCAATGTGTATGGAACAAGATACAACACGAAATCCAAGACCTGGA
GAAGTGGATGGGAAAGATGTTGGCGGAAATCTCAGCAGTCGCAGTCTTCT
CAAGACAACTCTTCAAACCAGGAAGTAAATTCCTCTTGCAACAGATTTTG
TCAACTTCTACAAGAGCAGGACATTCGGAAGTTAGAATGACTGAACTTCC
CGATTCGTACCACCACAAGGTCATCAACGACGATTTAGAAAAAGCATATA
TCGATCTAAGGGATATCATATCAAAGGAGAGACGTTTGAGAGGTCGAGGA
ACAGAAAGTGAAGAAGCCATACAAAAACGACTGAATACCAGCAAGAAAGA
ATTTGAATACGTAAGAAAGCAGTTCAAGACGTTTTAGATTCCGGAAAAAT
TTGCATCATGGACATCGATTCACAGGGAGTTAAGAACGTCAAGAAAGTGA
ATTTCGATTGTGTTTTGGTTTTTATCCAACCTCCTTCCATCGAAGAATTG
ACTACCACTACTCAAACAAAGAAGAAATGTTGAAAGCGATCGAAAATGGA
GAATTTTTGGAAAGTGCAGAATTCTCTGGCAATGTGTATGGAACAAGATA
CAACACGAAATCCAAGACCTGGAGAAGTGGATGGGAAAGATGTTGGCGGA
AATCTCAGCAGTCGCAGTCTTCTCAAGACAACTCTTCAAACCAGGAAGTA
AATTCCTCTTGCAACAGATTTTGTCAACTTCTACAAGAGCAGGACATTCG
GAAGTTAGAATGACTGAACTTCCCGATTCGTACCACCACAAGGTCATCAA
CGACGATTTAGAAAAAGCATATATCGATCTAAGGGATATCATATCAAAGG
AGAGACGTTTGAGAGGTCGAGGAACAGAAAGTGAAGAAGCCATACAAAAA
CGACTGAATACCAGCAAGAAAGAATTTGAATACGTAAGAAAGCAGTTCAA
GACGTTTTAGATTCCGGAAAAATTTGCATCATGGACATCGATTCACAGGG
AGTTAAGAACGTCAAGAAAGTGAATTTCGATTGTGTTTTGGTTTTTATCC
AACCTCCTTCCATCGAAGAATTGACTACCACTACTCAAACAAAGAAGAAA
TGTTGAAAGCGATCGAAAATGGAGAATTTTTGGAAAGTGCAGAATTCTCT
GGCAATGTGTATGGAACAAGATACAACACGAAATCCAAGACCTGGAGAAG
TGGATGGGAAAGATGTTGGCGGAAATCTCAGCAGTCGCAGTCTTCTCAAG
ACAACTCTTCAAACCAGGAAGTAAATTCCTCTTGCAACAGATTTTGTCAA
CTTCTACAAGAGCAGGACATTCGGAAGTTAGAATGACTGAACTTCCCGAT
TCGTACCACCACAAGGTCATCAACGACGATTTAGAAAAAGCATATATCGA
TCTAAGGGATATCATATCAAAGGAGAGACGTTTGAGAGGTCGAGGAACAG
AAAGTGAAGAAGCCATACAAAAACGACTGAATACCAGCAAGAAAGAATTT
GAATACGTAAGAAAGCAGTTCAAGACGTTTTAGATTCCGGAAAAATTTGC
ATCATGGACATCGATTCACAGGGAGTTAAGAACGTCAAGAAAGTGAATTT
CGATTGTGTTTTGGTTTTTATCCAACCTCCTTCCATCGAAGAATTGACTA
CCACTACTCAAACAAAGAAGAAATGTTGAAAGCGATCGAAAATGGAGAAT
TTTTGGAAAGTGCAGAATTCTCTGGCAATGTGTATGGAACAAGATACAAC
ACGAAATCCAAGACCTGGAGAAGTGGATGGGAAAGATGTTGGCGGAAATC
TCAGCAGTCGCAGTCTTCTCAAGACAACTCTTCAAACCAGGAAGTAAATT
CCTCTTGCAACAGATTTTGTCAACTTCTACAAGAGCAGGACATTCGGAAG
TTAGAATGACTGAACTTCCCGATTCGTACCACCACAAGGTCATCAACGAC
GATTTAGAAAAAGCATATATCGATCTAAGGGATATCATATCAAAGGAGAG
ACGTTTGAGAGGTCGAGGAACAGAAAGTGAAGAAGCCATACAAAAACGAC
TGAATACCAGCAAGAAAGAATTTGAATACGTAAGAAAGCAGTTCAAGACG
TTTTAGATTCCGGAAAAATTTGCATCATGGACATCGATTCACAGGGAGTT
AAGAACGTCAAGAAAGTGAATTTCGATTGTGTTTTGGTTTTTATCCAACC
TCCTTCCATCGAAGAATTGACTACCACTACTCAAACAAAGAAGAAATGTT
GAAAGCGATCGAAAATGGAGAATTTTTGGAAAGTGCAGAATTCTCTGGCA
ATGTGTATGGAACAAGATACAACACGAAATCCAAGACCTGGAGAAGTGGA
TGGGAAAGATGTTGGCGGAAATCTCAGCAGTCGCAGTCTTCTCAAGACAA
CTCTTCAAACCAGGAAGTAAATTCCTCTTGCAACAGATTTTGTCAACTTC
TACAAGAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016420XLOC_016420Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028915-proteinTCONS_00028915-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028915-exon-sc0000715-1575043694:12677..13340TCONS_00028915-exon-sc0000715-1575043694:12677..13340Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1575043694:6427..6468TCONS_00028915-exon-sc0000715-1575043694:6427..6468Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1575043694:4977..5073TCONS_00028915-exon-sc0000715-1575043694:4977..5073Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1575043694:4482..4620TCONS_00028915-exon-sc0000715-1575043694:4482..4620Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1575043694:3597..3681TCONS_00028915-exon-sc0000715-1575043694:3597..3681Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1575043694:3111..3196TCONS_00028915-exon-sc0000715-1575043694:3111..3196Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1575043694:2306..2590TCONS_00028915-exon-sc0000715-1575043694:2306..2590Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:12677..13340TCONS_00028915-exon-sc0000715-1510915933:12677..13340Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:6427..6468TCONS_00028915-exon-sc0000715-1510915933:6427..6468Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:4977..5073TCONS_00028915-exon-sc0000715-1510915933:4977..5073Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:4482..4620TCONS_00028915-exon-sc0000715-1510915933:4482..4620Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:3597..3681TCONS_00028915-exon-sc0000715-1510915933:3597..3681Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:3111..3196TCONS_00028915-exon-sc0000715-1510915933:3111..3196Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1510915933:2306..2590TCONS_00028915-exon-sc0000715-1510915933:2306..2590Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:12677..13340TCONS_00028915-exon-sc0000715-1491911889:12677..13340Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:6427..6468TCONS_00028915-exon-sc0000715-1491911889:6427..6468Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:4977..5073TCONS_00028915-exon-sc0000715-1491911889:4977..5073Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:4482..4620TCONS_00028915-exon-sc0000715-1491911889:4482..4620Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:3597..3681TCONS_00028915-exon-sc0000715-1491911889:3597..3681Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:3111..3196TCONS_00028915-exon-sc0000715-1491911889:3111..3196Clytia hemisphaericaexon
TCONS_00028915-exon-sc0000715-1491911889:2306..2590TCONS_00028915-exon-sc0000715-1491911889:2306..2590Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000715supercontigsc0000715:2306..13340 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.99586	7.24701	4.10963	2.62208	0	0	0.3608	0.619974	7.34328	7.75947	5.38449	3.81607	5.8275	5.50496	7.02591	6.87973	19.6692	14.6853	2.89753	5.21731	15.1431	12.1901	21.1632	18.8452	0	0.557804	30.2581	21.2265	14.8305	15.0613
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008145GK/Ca_channel_bsu
IPR017665Guanylate_kinase
IPR008144Guanylate_kin-like_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0004385guanylate kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006163purine nucleotide metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006163 purine nucleotide metabolic process
molecular_function GO:0004385 guanylate kinase activity
Blast
[Close]
BLAST of TCONS_00028915 vs. Swiss-Prot (Human)
Match: KGUA (Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 7.040e-37
Identity = 72/155 (46.45%), Postives = 112/155 (72.26%), Query Frame = 1 
Query:  667 TTRNPRPGEVDGKDYHYSNKEEMLKAIENGEFLESAEFSGNVYGTSKKAVQDVLDSGKICIMDIDSQGVKNVKKVNFDCVLVFIQPPSIXXXXXXXXXXXXXXXXAIQKRLNTSKKEFEYAELPDSYHHKVINDDLEKAYIDLRDIISKDIRKLE 1131
            TTRNPRPGE +GKDY++  +E M + I  G+F+E AEFSGN+YGTSK AVQ V    +IC++D+D QGV+N+K  +   + + +QPPS+  LE+RLR R TE+EE++ KRL  ++ + E ++ P  +   +IND L++AY +L++ +S++I+K +
Sbjct:   39 TTRNPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKVAVQAVQAMNRICVLDVDLQGVRNIKATDLRPIYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQADMESSKEPGLFDVVIINDSLDQAYAELKEALSEEIKKAQ 193
The following BLAST results are available for this feature:
BLAST of TCONS_00028915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KGUA7.040e-3746.45Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2[more]
back to top