TCONS_00070721-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00070721-protein
Unique NameTCONS_00070721-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length335

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00070721-protein ID=TCONS_00070721-protein|Name=TCONS_00070721-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MAENNETVEKKEKKIKLKIDNVSIKEIVDKNEGSKIPIKFSLEIKKGGKI
MGTCHVTIDNLFDRVEFGDNRKNDFLFKPYESKRKISKTPKPKEGSKQCE
DCGKVFKTNYRRRIHHDAIHKGLKPFKCTECGKSFARKEELGKHLHVHSE
IKPYTCQVCGKGFVHKCRMETHVDIAHKGLQPFQCQECEKRYSHKFDLKR
HVDVAHRGLKPFKCTKCEQSFANKYDFKRHKKTHEDIEAIVNPPREPAAV
VLHKDHQFNTINPRETPIFPRETLTFPRDASVFSRDVLTNRPEPPSSIVE
MVVCDNEIAKQNLMVLAGFSGANQPMATNMSHQQP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_043997XLOC_043997Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00070721TCONS_00070721Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 183..206
e-value: 0.024
score: 23.8
coord: 126..148
e-value: 0.001
score: 28.3
coord: 154..177
e-value: 0.078
score: 22.1
coord: 97..120
e-value: 4.3
score: 16.3
coord: 212..234
e-value: 0.0013
score: 28.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 128..148
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 214..234
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 156..177
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 99..120
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 185..206
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 154..182
score: 12.445
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 97..125
score: 11.635
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 126..153
score: 15.168
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 183..211
score: 13.048
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 212..239
score: 11.365
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 98..129
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 120..172
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 182..234
NoneNo IPR availableGENE3D2.10.69.10coord: 164..195
e-value: 2.1E-13
score: 49.8
NoneNo IPR availableGENE3D3.30.160.60coord: 123..138
e-value: 5.7E-11
score: 41.9
NoneNo IPR availableGENE3D3.30.160.60coord: 221..246
e-value: 9.9E-7
score: 28.3
NoneNo IPR availableGENE3D3.30.160.60coord: 139..163
e-value: 1.2E-15
score: 57.1
coord: 196..220
e-value: 1.3E-12
score: 47.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 183..206
e-value: 0.0027
score: 18.0
coord: 126..148
e-value: 4.0E-5
score: 23.8
coord: 212..234
e-value: 5.0E-4
score: 20.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 23..122
e-value: 4.3E-10
score: 39.2

Blast
BLAST of TCONS_00070721-protein vs. Swiss-Prot (Human)
Match: ZSCA2 (Zinc finger and SCAN domain-containing protein 2 OS=Homo sapiens GN=ZSCAN2 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 1.963e-28
Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 0
Query:   98 QCEDCGKVFKTNYRRRIHHDAIHKGLKPFKCTECGKSFARKEELGKHLHVHSEIKPYTCQVCGKGFVHKCRMETHVDIAHKGLQPFQCQECEKRYSHKFDLKRHVDVAHRGLKPFKCTKCEQSFANKYDFKRHKKTH 234
            +C DCGK F +     I H  IH G KPF+C ECGKSF+R   L  H   H+  KPY+C  CGK F ++  + TH  I H G +P++C+EC + +S+  +L RH  + H G KP+KCT C Q F+       H++TH
Sbjct:  279 KCRDCGKSF-SRSANLITHQRIHTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGI-HTGEKPYECKECGESFSYNSNLIRHQRI-HTGEKPYKCTDCGQRFSQSSALITHRRTH 412          

HSP 2 Score: 98.5969 bits (244), Expect = 9.496e-23
Identity = 54/137 (39.42%), Postives = 71/137 (51.82%), Query Frame = 0
Query:   98 QCEDCGKVFKTNYRRRIHHDAIHKGLKPFKCTECGKSFARKEELGKHLHVHSEIKPYTCQVCGKGFVHKCRMETHVDIAHKGLQPFQCQECEKRYSHKFDLKRHVDVAHRGLKPFKCTKCEQSFANKYDFKRHKKTH 234
            +C  CGK F +     I H+  H G K +KC ECGKSF+      +H   H+  KPY C+ CGK F     + TH  I H G +PFQC EC K +S   +L  H    H G KP+ C +C +SF N+     H+  H
Sbjct:  223 ECPQCGKTF-SRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRI-HTGEKPFQCAECGKSFSRSPNLIAH-QRTHTGEKPYSCPECGKSFGNRSSLNTHQGIH 356          

HSP 3 Score: 98.5969 bits (244), Expect = 1.113e-22
Identity = 53/137 (38.69%), Postives = 78/137 (56.93%), Query Frame = 0
Query:   98 QCEDCGKVFKTNYRRRIHHDAIHKGLKPFKCTECGKSFARKEELGKHLHVHSEIKPYTCQVCGKGFVHKCRMETHVDIAHKGLQPFQCQECEKRYSHKFDLKRHVDVAHRGLKPFKCTKCEQSFANKYDFKRHKKTH 234
            +C  CG+ F  +    + H  IH G KP+KC+ECGK F+++ +L  H   H+  KPY C +CGK F     +  H   AH G +P++C EC K +S    L  H  + H G KP+KC +C + F+N  +F  H++TH
Sbjct:  475 ECLTCGESFSWS-SNLLKHQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMH-QRAHLGDKPYRCPECGKGFSWNSVLIIHQRI-HTGEKPYKCPECGKGFSNSSNFITHQRTH 608          

HSP 4 Score: 93.5893 bits (231), Expect = 5.459e-21
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 0
Query:   98 QCEDCGKVFKTNYRRRIHHDAIHKGLKPFKCTECGKSFARKEELGKHLHVHSEIKPYTCQVCGKGFVHKCRMETHVDIAHKGLQPFQCQECEKRYSHKFDLKRHVDVAHRGLKPFKCTKCEQSFANKYDFKRHKKTH 234
            +C++CG+ F  N    I H  IH G KP+KCT+CG+ F++   L  H   H+  KPY C  CGK F     + TH    H   +P++C  C K +S    L  H  + H G KP++C  C +SF+   +  +H++ H
Sbjct:  363 ECKECGESFSYN-SNLIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNLATHRR-THMVEKPYKCGVCGKSFSQSSSLIAHQGM-HTGEKPYECLTCGESFSWSSNLLKHQRIH 496          

HSP 5 Score: 82.8037 bits (203), Expect = 2.318e-17
Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 0
Query:  118 AIHKGLKPFKCTECGKSFARKEELGKHLHVHSEIKPYTCQVCGKGFVHKCRMETHVDIAHKGLQPFQCQECEKRYSHKFDLKRHVDVAHRGLKPFKCTKCEQSFANKYDFKRHKKTH 234
              + G KP++C +CGK+F+RK  L  H   H+  K Y C  CGK F        H    H G +P++C++C K +S   +L  H  + H G KPF+C +C +SF+   +   H++TH
Sbjct:  214 GTYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRH-QTTHTGEKPYKCRDCGKSFSRSANLITHQRI-HTGEKPFQCAECGKSFSRSPNLIAHQRTH 328          
The following BLAST results are available for this feature:
BLAST of TCONS_00070721-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZSCA21.963e-2843.07Zinc finger and SCAN domain-containing protein 2 O... [more]
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