TCONS_00068009-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00068009-protein
Unique Name	TCONS_00068009-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	432

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00068009-protein ID=TCONS_00068009-protein|Name=TCONS_00068009-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
NTTLQKQSNISKAYLNSQILSISIFPSTKKTFDKPVVFTQQHRGITNNSV
PNCVYWHESTFGSHWSDEGCMVNTWNASHVTCHCYHLTNFAILMSVTDAP
KQLSEDNVLALSLITVIGITISLGALVISFLSFVFIKAIRSLRNTVHKHL
CVALFIAEGIFLFGIDKTGHKIGCQVIAASLHYFFLVAFFIMGLEGIVLY
MMLVRVYRSMGTSGYGSPKFIALCWVLPLVVITVNVFIDQNAYGDINGAC
WLSIENGFIWSFVGPVLLIVGMNFVFLGLTIKVMTEKAKRRNTAVEEIWF
WTKGVCLLLSILGVTWVFGVLYINQDTLFFAYIFAIVNSLQGLSIFVFHC
ACDPRVRKAYRDFFLCVSVRQKHELMRSMSRTRSTSGSKASMRKSLHSTR
GNQLIIGRSKESMPLYSNGLSSTPENSVGLLV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_042463	XLOC_042463	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00068009	TCONS_00068009	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000832	GPCR_2_secretin-like
IPR000203	GPS
IPR017981	GPCR_2-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity
GO:0004888	transmembrane signaling receptor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway
GO:0007166	cell surface receptor signaling pathway

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007166	cell surface receptor signaling pathway
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity
molecular_function	GO:0004888	transmembrane signaling receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000832	GPCR, family 2, secretin-like	PRINTS	PR00249	GPCRSECRETIN	coord: 113..137 score: 26.31 coord: 301..321 score: 22.6 coord: 331..352 score: 26.73 coord: 176..199 score: 27.26 coord: 260..285 score: 27.84
IPR000832	GPCR, family 2, secretin-like	PFAM	PF00002	7tm_2	coord: 110..344 e-value: 1.3E-48 score: 165.4
IPR000203	GPS motif	SMART	SM00303	GPS_3	coord: 49..99 e-value: 1.9E-11 score: 54.0
IPR000203	GPS motif	PFAM	PF01825	GPS	coord: 51..93 e-value: 2.9E-12 score: 47.0
IPR000203	GPS motif	PROSITE	PS50221	GPS	coord: 50..99 score: 15.657
None	No IPR available	GENE3D	1.20.1070.10		coord: 93..390 e-value: 4.6E-35 score: 120.5
IPR017981	GPCR, family 2-like	PROSITE	PS50261	G_PROTEIN_RECEP_F2_4	coord: 111..353 score: 32.239

Blast

[Close]

BLAST of TCONS_00068009-protein vs. Swiss-Prot (Human)
Match: AGRL2 (Adhesion G protein-coupled receptor L2 OS=Homo sapiens GN=ADGRL2 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 8.999e-84
Identity = 165/408 (40.44%), Postives = 244/408 (59.80%), Query Frame = 0

Query:   15 LNSQILSISIFPSTKKTF-DKPVVFTQQHRGITNNSVPNCVYWH--ESTFGSHWSDEGCMVNTWNASHVTCHCYHLTNFAILMSVTDAPKQLS-EDNV--LALSLITVIGITISLGALVISFLSFVFIKAIRSLRNTVHKHLCVALFIAEGIFLFGIDKTGHKIGCQVIAASLHYFFLVAFFIMGLEGIVLYMMLVRVYRSMGTSGYGSPKFIALC-WVLPLVVITVNVFIDQNAYGDINGACWLSIENGFIWSFVGPVLLIVGMNFVFLGLTIKVMTEKA---KRRNTAVEEIWFWTKGVCLLLSILGVTWVFGVLYINQDTLFFAYIFAIVNSLQGLSIFVFHCACDPRVRKAY----RDFFLC--VSVRQKHELMR-SMSRT--RSTSGSKASMRKSLHSTRGNQ 403
            +NS ++S+SI   + + +   PV+FT  H    N    NC +W+  E T   +WS +GC +   N +  TC C HLTNFAILM    A ++++ +D V  L L++IT +GI ISL  L I   +F F + ++S RNT+HK+LC+ LFIAE IFL GIDKT + I C + A  LH+FFL AF  M LEG+ LY+MLV V+ S     Y   K+  +  ++ P  V+ V+  ID  +YG    ACWL ++N FIWSF+GPV  I+ +N +FL +T+  M + +   K  ++ +E I  W  G   LL +LG+TW FG+L+IN++T+  AY+F I N+ QG+ IF+FHCA   +VRK Y    R  + C  +     H  ++ S +RT  R +SG+++ +R+  + T   Q
Sbjct:  749 VNSHVISVSINKESSRVYLTDPVLFTLPHIDPDNYFNANCSFWNYSERTMMGYWSTQGCKLVDTNKTRTTCACSHLTNFAILM----AHREIAYKDGVHELLLTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINLFIAEFIFLIGIDKTKYAIACPIFAGLLHFFFLAAFAWMCLEGVQLYLMLVEVFESE----YSRKKYYYVAGYLFPATVVGVSAAIDYKSYG-TEKACWLHVDNYFIWSFIGPVTFIILLNIIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLGAFALLCLLGLTWSFGLLFINEETIVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYGKCFRHSYCCGGLPTESPHSSVKASTTRTSARYSSGTQSRIRRMWNDTVRKQ 1147

The following BLAST results are available for this feature:

BLAST of TCONS_00068009-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00068009-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AGRL2	8.999e-84	40.44	Adhesion G protein-coupled receptor L2 OS=Homo sap...	[more]

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TCONS_00068009-protein (polypeptide) - C. hemisphaerica