|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028512 ID=TCONS_00028512|Name=TCONS_00028512|organism=Clytia hemisphaerica|type=transcript|length=1151bp
TTCTTCTAATGAGGTATTCAGACACACCAAAATATCTTGAGCATTGTTGT
CTAGACCAACTATCAGGGACTAAAGTTAACATTTGAAGTTTTTATGTAGC
ATatattaaattttctttcattgcATTATATAATCTATCCAACTCTGTTG
CTTTTTCTTCAAGTTCACTTTCAACTGTCTTATTTTGATCGTTTGAATCA
TCAAGTTGATTATGCTtcagaaatattatttttcagAGTATCAACTGCTC
GGTTTACAAGGTTAAATAATTCATTCTTTTGCATATCGTATAGAATTTTT
TCCTTGGTAAAGAGACTAGGTGTTGACCAAAGTAAAAATACCATGTACCC
AGAAGGCttcttcatctttttctttgtgtttgttGGTAGGATACGATATA
TTTGGACAAGGATTCTGTCTTTTTCTATTGATATAGCCAGATCTGCTAAT
GAAATGCTTCTAGACGACAAACCTTTCTCTTCACTCCATTTAATGTGTCG
ATAGAATATAAGTCGTACTAATACCAAGCATTGAATTTGTTGTAAGTGGG
GTTACTAAACCCAATTACTGAACCAGTAAAAAGAGGCAATTCATCCACTG
AGTATCTGAGATCTGAGTATCTGATGGAAATCTCGTCAAAAGGTGTGCCA
CACATATCAAGAAGCTATAACCGAACTCAATATTCGAAAAGTGAAATCCT
ACCAACGAATGATATGCTTTCCATATTATCCTTTATAACTTCGAACTCGT
GTTTTGTACAGACAGCTGGCTTTCTAGATGAATCCTTCGGGAAGGGAAAC
AACCTGTACTGAATCGTTGCAGATCTTCTTGTAAGGGAGTGGTTTTCGAC
TTGTTTTAATGAACCTAAAATGTTAATAGATTCACCAAGAACTCTAGGTT
ACTGAGTTTTTTTTCTGGTCATccttatctttttcttttgcgATTCTAAT
GAAATGACGTAGCATTGAGAATTCAGGCTCTTCGGTCCCAGTAGCTTTGT
CATTGTACAATTGTACAATGCTTTCACCGCATCCGGCAATCCCTTCCATG
CCGTATTGGCTTCTTCAAACGTTACATCGttaactgaaataaaaaaaata
aaatacatgCGCTAAAAATTTGCTAGAAATATTATTAAACGATATTTAAA
C Run BLAST on NCBI transcript from alignment at sc0000683:92268..93418 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028512 ID=TCONS_00028512|Name=TCONS_00028512|organism=Clytia hemisphaerica|type=transcript|length=1151bp|location=Sequence derived from alignment at sc0000683:92268..93418 (Clytia hemisphaerica)
GTTTAAATATCGTTTAATAATATTTCTAGCAAATTTTTAGCGcatgtatt
ttattttttttatttcagttaaCGATGTAACGTTTGAAGAAGCCAATACG
GCATGGAAGGGATTGCCGGATGCGGTGAAAGCATTGTACAATTGTACAAT
GACAAAGCTACTGGGACCGAAGAGCCTGAATTCTCAATGCTACGTCATTT
CATTAGAATcgcaaaagaaaaagataaggATGACCAGAAAAAAAACTCAG
TAACCTAGAGTTCTTGGTGAATCTATTAACATTTTAGGTTCATTAAAACA
AGTCGAAAACCACTCCCTTACAAGAAGATCTGCAACGATTCAGTACAGGT
TGTTTCCCTTCCCGAAGGATTCATCTAGAAAGCCAGCTGTCTGTACAAAA
CACGAGTTCGAAGTTATAAAGGATAATATGGAAAGCATATCATTCGTTGG
TAGGATTTCACTTTTCGAATATTGAGTTCGGTTATAGCTTCTTGATATGT
GTGGCACACCTTTTGACGAGATTTCCATCAGATACTCAGATCTCAGATAC
TCAGTGGATGAATTGCCTCTTTTTACTGGTTCAGTAATTGGGTTTAGTAA
CCCCACTTACAACAAATTCAATGCTTGGTATTAGTACGACTTATATTCTA
TCGACACATTAAATGGAGTGAAGAGAAAGGTTTGTCGTCTAGAAGCATTT
CATTAGCAGATCTGGCTATATCAATAGAAAAAGACAGAATCCTTGTCCAA
ATATATCGTATCCTACCaacaaacacaaagaaaaagatgaagaaGCCTTC
TGGGTACATGGTATTTTTACTTTGGTCAACACCTAGTCTCTTTACCAAGG
AAAAAATTCTATACGATATGCAAAAGAATGAATTATTTAACCTTGTAAAC
CGAGCAGTTGATACTctgaaaaataatatttctgaAGCATAATCAACTTG
ATGATTCAAACGATCAAAATAAGACAGTTGAAAGTGAACTTGAAGAAAAA
GCAACAGAGTTGGATAGATTATATAATgcaatgaaagaaaatttaatatA
TGCTACATAAAAACTTCAAATGTTAACTTTAGTCCCTGATAGTTGGTCTA
GACAACAATGCTCAAGATATTTTGGTGTGTCTGAATACCTCATTAGAAGA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028512-exon-sc0000683-1491911889:92268..93418 | TCONS_00028512-exon-sc0000683-1491911889:92268..93418 | Clytia hemisphaerica | exon |
| TCONS_00028512-exon-sc0000683-1510915933:92268..93418 | TCONS_00028512-exon-sc0000683-1510915933:92268..93418 | Clytia hemisphaerica | exon |
| TCONS_00028512-exon-sc0000683-1575043694:92268..93418 | TCONS_00028512-exon-sc0000683-1575043694:92268..93418 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000683 | supercontig | sc0000683:92268..93418 . |
Blast
The following BLAST results are available for this feature:
|
