TCONS_00067464-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067464-protein
Unique NameTCONS_00067464-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length414

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067464-protein ID=TCONS_00067464-protein|Name=TCONS_00067464-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
FQCFARGSEFGEHSNDHSYEIRQLSFSLFGDEKWSARDELHLLEELEDNG
FGNWQGISKRLNKKSSKDVQNHYLKCYIEKPKDTLPKVTVDSRTFFRRSI
DFQESQCPPRPGSSCPPEDELFSIGYMPARGDFSIESDNFAECDIKDVDF
IQNQPAAVTASLTNSEEQDALMTEMNHHMMDMFYVRQRERNLKKTLVKKY
GLLDVVTSSVFYTYGREERMVRDVMKKFTQFMEPLAHEKFVQGLLYQKSL
ESRIRRLQEYREHGLKTFKDAVFYEKLKRRRDRSKKFQTFRLDEVVPNQN
NPLACQVWLHKQINKKKIFNLPFPNMSKKHVPPLDLKGLPCVDELTDGEK
EICATIRMAPKDYLDNRTTLQEESFRSDGVRLAVARTLLKINVNNTKKLY
DFMVDAGIIKGLQT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_042136XLOC_042136Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067464TCONS_00067464Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR007526SWIRM
IPR017884SANT_dom
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 30..79
e-value: 2.3E-5
score: 33.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 33..75
e-value: 2.0E-7
score: 30.9
NoneNo IPR availableGENE3D1.10.10.60coord: 30..79
e-value: 1.0E-7
score: 31.3
NoneNo IPR availableCDDcd00167SANTcoord: 33..75
e-value: 0.00113379
score: 35.629
IPR007526SWIRM domainPROSITEPS50934SWIRMcoord: 325..414
score: 10.665
IPR017884SANT domainPROSITEPS51293SANTcoord: 29..81
score: 12.891
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 30..81
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 319..409

Blast
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BLAST of TCONS_00067464-protein vs. Swiss-Prot (Human)
Match: TAD2A (Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3)

HSP 1 Score: 250.751 bits (639), Expect = 4.243e-79
Identity = 141/425 (33.18%), Postives = 233/425 (54.82%), Query Frame = 0 
Query:    1 FQCFARGSEFGEHSNDHSYEIRQLSFSLFGDEKWSARDELHLLEELEDNGFGNWQGISKRLNKKSSKDVQNHYLKCYIEKP---------KDTLPKVTVDSRTFFRRSIDFQESQCPPRPGSSCPPEDELFS---IGYMPARGDFSIESDNFAECDIKDVDFIQNQPAAVTASLTNSEEQDALMTEMNHHMMDMFYVRQRERNLKKTLVKKYGLLDVVTSSVF-YTYGREERMVRDVMKKFTQFMEPLAHEKFVQGLLYQKSLESRIRRLQEYREHGLKTFKDAVFYEKLKRRRDRSKKFQTFRLDEVVPNQNNPLACQVWLHKQINKKKIFNLPFP---NMSKKHVPPLDLKGLPCVDELTDGEKEICATIRMAPKDYLDNRTTLQEESFRSDGVRLAVARTLLKINVNNTKKLYDFMVDAGII 409
             QCF RG E+ +H +DH+YEI    F +  D  W+A++E+ LLE + D GFGNWQ ++ ++  K+ ++ + HY+K +I  P         K      T D+      +I F  +  PPRP       D L S    GYMPAR DF  E DN+AE D++D+DF+              E+   ++  +   ++D+++ R +ER  +K +++ +GL+++    +    Y +E + + + M++F + + P+ H+KF++    +  L   I+RLQEYR  G+  F  A  Y+ LK+ R+  +  +T  L EV+    +  ACQ WL +Q +     +   P   N  ++  PPL+L GLP  ++L + EKE+C  +R+ P  YL+ ++ L  E  +  G+RLA AR L+KI+VN T+K+YDF++  G I
Sbjct:   43 LQCFTRGFEYKKHQSDHTYEIMTSDFPVL-DPSWTAQEEMALLEAVMDCGFGNWQDVANQMCTKTKEECEKHYMKHFINNPLFASTLLNLKQAEEAKTADT------AIPFHSTDDPPRPTF-----DSLLSRDMAGYMPARADFIEEFDNYAEWDLRDIDFV--------------EDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEERLKRTM-LSEVLQYIQDSSACQQWLRRQADIDSGLSPSIPMASNSGRRSAPPLNLTGLPGTEKLNEKEKELCQMVRLVPGAYLEYKSALLNECNKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYI 440
The following BLAST results are available for this feature:
BLAST of TCONS_00067464-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAD2A4.243e-7933.18Transcriptional adapter 2-alpha OS=Homo sapiens GN... [more]
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