TCONS_00067213-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067213-protein
Unique NameTCONS_00067213-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length461

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067213-protein ID=TCONS_00067213-protein|Name=TCONS_00067213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
MLSLAKFFHLQTYWAKDIVFLLTEHNVYGMKAWLQGYFEDEQTDVRSERL
EGHAGSIQAALTVDLESENVLYFDISIHGMNGMQPNLDLVHLLVRIANYE
SVPVKLQFQNSLYVAPHDFKQSLDTLMRTMSWQISGIPYGNHGLFYKYRI
EAYTLKGISSNPNIGRNYPVDFESIGRYIEGVFRSINNLLEHIHQSFFMY
LLPNTNRYISIGLYIPPLACLVFPLLVCLLQSWISLFQLDAEETDQQTSI
QKVVSLSKLGNIRVFQRLIVAFGTSWAIHYSFIHREEYLSKLKDPLVGKE
ELTLISFIVNCVLGAVFMRLTCGRLKEKDDIHSFHFCTTIGLTTLIILAS
IFNFPAAFFVAALYVPVIMTSDSQKWLVKFIHLITLILSMPPIFLLVTSS
FAHLDQMQEKPANVQKLYELSLNDWSWQMSLIQDYDGIGLWTWKVFFIAL
LMWLMLTSAPV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041990XLOC_041990Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067213TCONS_00067213Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007246Gaa1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0042765GPI-anchor transamidase complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0042765 GPI-anchor transamidase complex
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007246GPI transamidase component Gaa1PFAMPF04114Gaa1coord: 1..455
e-value: 1.3E-98
score: 331.1

Blast
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BLAST of TCONS_00067213-protein vs. Swiss-Prot (Human)
Match: GPAA1 (Glycosylphosphatidylinositol anchor attachment 1 protein OS=Homo sapiens GN=GPAA1 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 1.201e-54
Identity = 96/215 (44.65%), Postives = 141/215 (65.58%), Query Frame = 0 
Query:    8 FHLQTYWAKDIVFLLTEHNVYGMKAWLQGYFEDEQTDVRSERLEGHAGSIQAALTVDLESENVLYFDISIHGMNGMQPNLDLVHLLVRIANYESVPVKLQFQNSLYVAPHDFK------QSLDTLMRTMSWQISGIPYGNHGLFYKYRIEAYTLKGISSNPNIGRNYPVDFESIGRYIEGVFRSINNLLEHIHQSFFMYLLPNTNRYISIGLYIP 216
            F  Q YWAKDIVFL+TEH++ G +AWL+ Y +   T ++S  L+G AG+IQAA+ ++L S+ V   D+++ G+NG  PNLDL++L         +   LQ +    + P D+       Q L TL+  +  Q SG P+G+HGLF +YR+EA TL+GI+S     R Y  D  ++G+ +EG+FR +N+LLE +HQSFF+YLLP  +R++SIGLY+P
Sbjct:  170 FRGQIYWAKDIVFLVTEHDLLGTEAWLEAYHDVNVTGMQSSPLQGRAGAIQAAVALELSSDVVTSLDVAVEGLNGQLPNLDLLNLFQTFCQKGGLLCTLQGK----LQPEDWTSLDGPLQGLQTLLLMVLRQASGRPHGSHGLFLRYRVEALTLRGINSF----RQYKYDLVAVGKALEGMFRKLNHLLERLHQSFFLYLLPGLSRFVSIGLYMP 376
The following BLAST results are available for this feature:
BLAST of TCONS_00067213-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GPAA11.201e-5444.65Glycosylphosphatidylinositol anchor attachment 1 p... [more]
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