TCONS_00066643-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066643-protein
Unique NameTCONS_00066643-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length290

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066643-protein ID=TCONS_00066643-protein|Name=TCONS_00066643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
FLKFLMSNDQHLQSDLYKIKMDVNEVRVSTDKDFEHFHSLVNNDDGWTNS
YNKNNLIVKTRWTDESRIKLIKVSYPMENVTLETLYDALHDPEYRKVWDK
DMANSYDICKLNDNNVIGWYAAKMPPPLKFRDWCLLRTWKKTDKEFMIFN
HSVEHNAVPVRKNYVRSISYLTGYYGKKLDKNTTQMIFLTQTDPKGKLPK
WFVNFLSTSMAPRIMKKLYKTTLGYEKWHKKSGAAHKPWLEPEHNKLPLL
DRKDIPACNSNDDDGFEMIDEDIDETNAEMEEKISNGSDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041682XLOC_041682Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066643TCONS_00066643Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002913START_lipid-bd_dom
IPR023393START-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008289 lipid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002913START domainSMARTSM00234START_1coord: 27..229
e-value: 1.8E-12
score: 57.4
IPR002913START domainPFAMPF01852STARTcoord: 43..221
e-value: 8.0E-23
score: 80.8
IPR002913START domainPROSITEPS50848STARTcoord: 43..227
score: 28.622
IPR023393START-like domainGENE3D3.30.530.20coord: 23..238
e-value: 2.5E-46
score: 157.4
NoneNo IPR availableCDDcd08871START_STARD10-likecoord: 23..243
e-value: 4.98792E-110
score: 319.587
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 30..220

Blast
[Close]
BLAST of TCONS_00066643-protein vs. Swiss-Prot (Human)
Match: STA10 (START domain-containing protein 10 OS=Homo sapiens GN=STARD10 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 9.362e-56
Identity = 102/268 (38.06%), Postives = 147/268 (54.85%), Query Frame = 0 
Query:   26 VRVSTDKDFEHFHSLVNNDDGWTNSYNKNNLIVKTRWTDESR-IKLIKVSYPMENVTLETLYDALHDPEYRKVWDKDMANSYDICKLNDNNVIGWYAAKMPPPLKFRDWCLLRTWKKTDKEFMIFNHSVEHNAVPVRKNYVRSISYLTGYYGKKLDKNTTQMIFLTQTDPKGKLPKWFVNFLSTSMAPRIMKKLYKTTLGYEKWHKKSGAAHKPWLEPEHNKLPLLDRKDIPACNSNDDDGFEMIDED-IDETNAE-MEEKISNGSDE 290
            V+V  D+DF  F S    + GW  +Y++  + V  +  +  R +  IK      +V  ETLYD LHD EYRK WD ++  ++DI +L  N  +G+Y+ + P PLK RD   LR+W     +++I N+SV+H   P RK+ VR++S  TGY  +     +  + +L Q DPKG LPKW VN  S  +AP+ MKK+YK  L Y +W +K     KPWL PE + LP L   ++   +    D  E IDE  + E+  E M      GSD+
Sbjct:   22 VQVPDDQDFRSFRSECEAEVGWNLTYSRAGVSVWVQAVEMDRTLHKIKCRMECCDVPAETLYDVLHDIEYRKKWDSNVIETFDIARLTVNADVGYYSWRCPKPLKNRDVITLRSWLPMGADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLIQSTGPKSCVITYLAQVDPKGSLPKWVVNKSSQFLAPKAMKKMYKACLKYPEWKQKHLPHFKPWLHPEQSPLPSLALSEL---SVQHADSLENIDESAVAESREERMGGAGGEGSDD 286
The following BLAST results are available for this feature:
BLAST of TCONS_00066643-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STA109.362e-5638.06START domain-containing protein 10 OS=Homo sapiens... [more]
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