TCONS_00062286-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062286-protein
Unique NameTCONS_00062286-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062286-protein ID=TCONS_00062286-protein|Name=TCONS_00062286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MATVGIRPSSQGQAINLKDFEINYDAETEEFDMECKKFMNEFVGHIFEAD
GYSTQEDKAKFGLLVQHQEGRSWFAKFVDGQRVKSKEVTEFAFYRLVQYF
AVCLFECNVADDFAPATTLMNMCFTYNFTSTNAIGRTAGQSSKQFVYEYL
KDQPIWKSLRFWDSAFLMAIHADRTKRIGAMSGWNTWDQQQKDDFEIGEE
NSAFAHLASFLYMMNALGVEKNDREIFRNKMSTIGNLREEQIRELEESIE
ILQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039030XLOC_039030Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062286TCONS_00062286Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022096SBF1/SBF2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..253
IPR022096SBF1/SBF2 domainPFAMPF12335SBF2coord: 83..208
e-value: 3.4E-7
score: 30.0

Blast
[Close]
BLAST of TCONS_00062286-protein vs. Swiss-Prot (Human)
Match: K0513 (Uncharacterized protein KIAA0513 OS=Homo sapiens GN=KIAA0513 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.277e-23
Identity = 49/93 (52.69%), Postives = 59/93 (63.44%), Query Frame = 0 
Query:   36 KKFMNEFVGHIFEADGYSTQEDKAKFG--LLVQHQEGRSWFAKFVDGQRVKSKEVTEFAFYRLVQYFAVCLFECNVADDFAPATTLMNMCFTY 126
            + FM  +V  IF       QE+KAKFG     ++ +GR WFA++V  QR  SK V+E  FYRLVQ FAV LFEC+  DDF PA  LM MCFTY
Sbjct:   96 RDFMRGYVEKIFSGGEDLDQEEKAKFGEYCSSENGKGREWFARYVSAQRCNSKCVSEATFYRLVQSFAVVLFECHQMDDFGPAKNLMTMCFTY 188

HSP 2 Score: 82.4185 bits (202), Expect = 3.998e-18
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 0 
Query:  140 QSSKQFVYEYLKDQPIWKSLRFWDSAFLMAIHADRTKRIGAMSG-----------WNTWDQQQKDDFEIGEENSAFAHLASFLYMMNALGVEKNDREIFRNKMSTIGNLREEQIRELEESIEIL 252
            +  K ++Y +LK QPIW +LRFW++AF  A+H +RTKR     G           W    Q+++DD     EN  F  L +F + M A G+ K     F  K + IGNL EEQ + L + IE +
Sbjct:  285 KGEKIYLYTHLKQQPIWHTLRFWNAAFFDAVHCERTKRSPTTRGDAGEEEEKREKWCHMTQEERDDSLRFNENITFGQLGTFTHNMLAFGLNKKLCNDFLKKQAVIGNLDEEQYKLLSDHIEQM 408
The following BLAST results are available for this feature:
BLAST of TCONS_00062286-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
K05131.277e-2352.69Uncharacterized protein KIAA0513 OS=Homo sapiens G... [more]
back to top