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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028242 ID=TCONS_00028242|Name=TCONS_00028242|organism=Clytia hemisphaerica|type=transcript|length=734bp
tgagaaattcttttatcAATTCTGTTTTGTCAGTATAAGTCTCGTGCCTA
CTTCATAAACCACAcgaaagaatattttttactattttgtaGCGAATCTG
AAGAACTACCAGAATGATCATGACAGCCCTGGCAAACCACAAGATCACCA
gtaccaacaacaacaactccaGCAAGATATGCATTCTGGTGGTGAAGAAA
GTCCTCTCATGAAAGCACTTAACGAATCACAAAATAAAGGCACTCTTGCC
AACACCTACAGAAGCCCCAACTCCAGTATGAATGCTGGGCAAAacCACAA
ATCACCAAAAACATATGCACGAGGTGCTGCTCTCAAAGAACTCAAAGGAA
TCGGTTCAAAGGTAAGACTACTTTTATCTAGTTCGCTGAAAAATAGTAGG
ACCCTCCAGGAGTACGACTTAAGACAATCGtaaaatagattttgatgatg
acAGTCAGTTCAAAATATTATCAGTAGTCAAATGTGTTATAGGTCGTCCT
GGTGAATGACTAATAAATGTCAATTATTATCAAAACGTCCGGTTGTTCAT
AGACCTTTCCATAACAGCCCCTTTCATCTAAATATCCTCACAAAAACGGA
TGTTTAACCCTCAATTCTTTCTTCTTCATCCGAAACACTCGCCTAAAAAC
TCATATTTCACAcccatttaaaaaagtttcccTCGATCCACCGTTCAAGC
ATTTGCTAATTGAAAATGGAATTCTTTAAAACCC Run BLAST on NCBI transcript from alignment at sc0000671:283..1700- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028242 ID=TCONS_00028242|Name=TCONS_00028242|organism=Clytia hemisphaerica|type=transcript|length=1418bp|location=Sequence derived from alignment at sc0000671:283..1700- (Clytia hemisphaerica)
TGAGAAATTCTTTTATCAATTCTGTTTTGTCAGTATAAGTCTCGTGCCTA
CTTCATAAACCACACGAAAGAATATTTTTTACTATTTTGTAGCGAATCTG
AAGAACTACCAGAATGATCATGACAGCCCTGGCAAACCACAAGATCACCA
GTACCAACAACAACAACTCCAGCAAGATATGCATTCTGGTGGTGAAGAAA
GTCCTCTCATGAAAGCACTTAACGAATCACAAAATAAAGGCACTCTTGCC
AACACCTACAGAAGCCCCAACTCCAGTATGAATGCTGGGCAAAGTAAGTA
TTCACTGATGTTTTGTAGCATTTTCTATATCTAAGTTGATATGAAAAATG
TTCGATATTGCAGTCGAATGCGGTGCCTAGCTTTTTGAAATATGATTTTT
TTTCCAGACCACAAATCACCAAAAACATATGCACGAGGTGCTGCTCTCAA
AGAACTCAAAGGAATCGGTTCAAAGGTAAGACCACTTTTATCTAGTTCGC
TGAAAAATAGTAGGACCCTCCAGGAGTATGACTTAAGACAATTGTAAAAT
AGATTTTGATGATGACAGTCAGTTCAAAATATTATCAGTAGTCAAATGTG
TAATCGGTCGTCCTGGTGAATGTCAATCTTTATCAAAACGTCCGGTTGTT
CATAGACCTTTCCATAACAGCCCCTTTCATATAAATATCCTCACAAAAAC
GAATGTTTAACCCTCAATTCTTTCTGCTTCATCCGAAACACTCGCCTAAA
AACTCATACTTCACACCCCTTTAAAAAAGTTTCACTCAATTCACCGTTCA
AGCACTTGCTAATTGAAAATGAAATTCTTTAAAACCCTGTAAACATTAAA
ATAAATATCTAAATATTTTATTTGATTATCATGTCCCGACTGATGCCCTA
GACNTGATATGAAAAATGTTCGATATTGCAGTCGATTGCGGTGCCTTAGT
CTTTTGAAATATGAATTTTTTTTCCAGACCACAAATCACCAAAAACATAT
GCACGAGGTGCTGCTCTCAAAGAACTCAAAGGAATCGGTTCAAAGGTAAG
ACTACTTTTATCTAGTTCGCTGAAAAATAGTAGGACCCTCCAGGAGTACG
ACTTAAGACAATCGTAAAATAGATTTTGATGATGACAGTCAGTTCAAAAT
ATTATCAGTAGTCAAATGTGTTATAGGTCGTCCTGGTGAATGACTAATAA
ATGTCAATTATTATCAAAACGTCCGGTTGTTCATAGACCTTTCCATAACA
GCCCCTTTCATCTAAATATCCTCACAAAAACGGATGTTTAACCCTCAATT
CTTTCTTCTTCATCCGAAACACTCGCCTAAAAACTCATATTTCACACCCA
TTTAAAAAAGTTTCCCTCGATCCACCGTTCAAGCATTTGCTAATTGAAAA
TGGAATTCTTTAAAACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028242-exon-sc0000671-1575043694:1408..1700 | TCONS_00028242-exon-sc0000671-1575043694:1408..1700 | Clytia hemisphaerica | exon |
| TCONS_00028242-exon-sc0000671-1575043694:283..723 | TCONS_00028242-exon-sc0000671-1575043694:283..723 | Clytia hemisphaerica | exon |
| TCONS_00028242-exon-sc0000671-1510915933:1408..1700 | TCONS_00028242-exon-sc0000671-1510915933:1408..1700 | Clytia hemisphaerica | exon |
| TCONS_00028242-exon-sc0000671-1510915933:283..723 | TCONS_00028242-exon-sc0000671-1510915933:283..723 | Clytia hemisphaerica | exon |
| TCONS_00028242-exon-sc0000671-1491911889:1408..1700 | TCONS_00028242-exon-sc0000671-1491911889:1408..1700 | Clytia hemisphaerica | exon |
| TCONS_00028242-exon-sc0000671-1491911889:283..723 | TCONS_00028242-exon-sc0000671-1491911889:283..723 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000671 | supercontig | sc0000671:283..1700 - |
Blast
The following BLAST results are available for this feature:
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