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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028233 ID=TCONS_00028233|Name=TCONS_00028233|organism=Clytia hemisphaerica|type=transcript|length=1271bp
GTGTTTTCCCAACTAAATTTTCTCTACATGAAACATTATCAATACTCTCG
GAACCGCTTTCTTCATTAACTTTACAAATACTTAGTCCATTGTGTAAAAG
TTCTACTTTATCATTAGAAACACACGCTCCTCTTTCCGAGGTATCTAGTC
CACTATCCATTGCGCTCACATTATCTTTAGAGACttcttgagaaaaattt
ttttcattatgcGATGAGCCTGCACATAATTCACTCATATCATTTCTGTT
AGAGCTAGAATCGTCAATGTCATTTACTGAAGCTTCTATACTTGGTATTT
CGATCACTGTTGCTTGCATGAAATTACCAAACTCGCTATTACCACCGAGA
GAAGCTTTATAACCAAGGTTTTCATGAACTTGTGTAACCATATCTGATTT
ACAGGTCTGTTGTTCCGTATTACCATCGTTTTCATCGGTTATACTGTCAC
TATAATTATGATTTTTAGTTAAACTTATCGCCGGGAATTCATCTTCGCAC
ATTGAAGCTTTTTCATCTGTTTGGTCGTGAGATATCACATTTTTCATGTC
TTTATTCTGAAGAGTAACTGTTTTCTGCGAGGAAGATTTTTTCAGCTTTA
ATGATTTAGTCATGGTCACAGTTTGTGCTGGTGGTGCGATATCAATTTCG
ACAGTGATAGCTTTTCCTGCTATACTAGAATTGCTTGCAGAGGTGGTGGT
TGGTTTACTGTTCCTGCTACTACTACTGCCTTCCATGATGCGTTGCAAGC
GGCTTTGAATATCTTTGGTAGTCTTAAATTCCTCTTTTTTCTCTGTCAGC
CATTTTGAATACCTACAAGTAAGTATTGTCAAAATAACACCTAAAGTTAA
TATGATTGGTCCAATAATCTTAGCCAATGACATGATTTTACGTTCTTGTT
CGAGATCCTCTATGCAGTGTTTGCACCAGTTGGTTGCTTCACGGTGGAAC
GGTTTATGAATGTTTCCGTAGATTGTCAACACGAAGCCGGATATGAAGAG
AAAAACACTGAACAGTTTCAGGAGACATTTGACGTCACGACGCCAGCCTC
GTGGATCGGTAATGGTACGTCGTTGTTCCTTAAACGGTTGCATTGGTAAC
GAAGATGGTTCTCCTCCACCAACAATGAATTGACAAGTTAAGGAACAGTT
AACAATCGATCTTGTTAATGAGGGAATTGTATATGAAAGCGAACGGAATG
AATAGCTTTGATATTCCTTCTCGGATATTTCTTGCTTTTTATAAAGCTTG
AGCTTAATTATgattaaaata Run BLAST on NCBI protein sequence of TCONS_00028233-protein >TCONS_00028233-protein ID=TCONS_00028233-protein|Name=TCONS_00028233-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
ILIIIKLKLYKKQEISEKEYQSYSFRSLSYTIPSLTRSIVNCSLTCQFIV
GGGEPSSLPMQPFKEQRRTITDPRGWRRDVKCLLKLFSVFLFISGFVLTI
YGNIHKPFHREATNWCKHCIEDLEQERKIMSLAKIIGPIILTLGVILTIL
TCRYSKWLTEKKEEFKTTKDIQSRLQRIMEGSSSSRNSKPTTTSASNSSI
AGKAITVEIDIAPPAQTVTMTKSLKLKKSSSQKTVTLQNKDMKNVISHDQ
TDEKASMCEDEFPAISLTKNHNYSDSITDENDGNTEQQTCKSDMVTQVHE
NLGYKASLGGNSEFGNFMQATVIEIPSIEASVNDIDDSSSNRNDMSELCA
GSSHNEKNFSQEVSKDNVSAMDSGLDTSERGACVSNDKVELLHNGLSICK
VNEESGSESIDNVSCRENLVGKT Run BLAST on NCBI transcript from alignment at sc0000670:130291..131561 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028233 ID=TCONS_00028233|Name=TCONS_00028233|organism=Clytia hemisphaerica|type=transcript|length=1271bp|location=Sequence derived from alignment at sc0000670:130291..131561 (Clytia hemisphaerica)
tattttaatcATAATTAAGCTCAAGCTTTATAAAAAGCAAGAAATATCCG
AGAAGGAATATCAAAGCTATTCATTCCGTTCGCTTTCATATACAATTCCC
TCATTAACAAGATCGATTGTTAACTGTTCCTTAACTTGTCAATTCATTGT
TGGTGGAGGAGAACCATCTTCGTTACCAATGCAACCGTTTAAGGAACAAC
GACGTACCATTACCGATCCACGAGGCTGGCGTCGTGACGTCAAATGTCTC
CTGAAACTGTTCAGTGTTTTTCTCTTCATATCCGGCTTCGTGTTGACAAT
CTACGGAAACATTCATAAACCGTTCCACCGTGAAGCAACCAACTGGTGCA
AACACTGCATAGAGGATCTCGAACAAGAACGTAAAATCATGTCATTGGCT
AAGATTATTGGACCAATCATATTAACTTTAGGTGTTATTTTGACAATACT
TACTTGTAGGTATTCAAAATGGCTGACAGAGAAAAAAGAGGAATTTAAGA
CTACCAAAGATATTCAAAGCCGCTTGCAACGCATCATGGAAGGCAGTAGT
AGTAGCAGGAACAGTAAACCAACCACCACCTCTGCAAGCAATTCTAGTAT
AGCAGGAAAAGCTATCACTGTCGAAATTGATATCGCACCACCAGCACAAA
CTGTGACCATGACTAAATCATTAAAGCTGAAAAAATCTTCCTCGCAGAAA
ACAGTTACTCTTCAGAATAAAGACATGAAAAATGTGATATCTCACGACCA
AACAGATGAAAAAGCTTCAATGTGCGAAGATGAATTCCCGGCGATAAGTT
TAACTAAAAATCATAATTATAGTGACAGTATAACCGATGAAAACGATGGT
AATACGGAACAACAGACCTGTAAATCAGATATGGTTACACAAGTTCATGA
AAACCTTGGTTATAAAGCTTCTCTCGGTGGTAATAGCGAGTTTGGTAATT
TCATGCAAGCAACAGTGATCGAAATACCAAGTATAGAAGCTTCAGTAAAT
GACATTGACGATTCTAGCTCTAACAGAAATGATATGAGTGAATTATGTGC
AGGCTCATCgcataatgaaaaaaatttttctcaagaaGTCTCTAAAGATA
ATGTGAGCGCAATGGATAGTGGACTAGATACCTCGGAAAGAGGAGCGTGT
GTTTCTAATGATAAAGTAGAACTTTTACACAATGGACTAAGTATTTGTAA
AGTTAATGAAGAAAGCGGTTCCGAGAGTATTGATAATGTTTCATGTAGAG
AAAATTTAGTTGGGAAAACAC Coding sequence (CDS) from alignment at sc0000670:130291..131561 >TCONS_00028233 ID=TCONS_00028233|Name=TCONS_00028233|organism=Clytia hemisphaerica|type=CDS|length=1269bp|location=Sequence derived from alignment at sc0000670:130291..131561 (Clytia hemisphaerica)
attttaatcATAATTAAGCTCAAGCTTTATAAAAAGCAAGAAATATCCGA
GAAGGAATATCAAAGCTATTCATTCCGTTCGCTTTCATATACAATTCCCT
CATTAACAAGATCGATTGTTAACTGTTCCTTAACTTGTCAATTCATTGTT
GGTGGAGGAGAACCATCTTCGTTACCAATGCAACCGTTTAAGGAACAACG
ACGTACCATTACCGATCCACGAGGCTGGCGTCGTGACGTCAAATGTCTCC
TGAAACTGTTCAGTGTTTTTCTCTTCATATCCGGCTTCGTGTTGACAATC
TACGGAAACATTCATAAACCGTTCCACCGTGAAGCAACCAACTGGTGCAA
ACACTGCATAGAGGATCTCGAACAAGAACGTAAAATCATGTCATTGGCTA
AGATTATTGGACCAATCATATTAACTTTAGGTGTTATTTTGACAATACTT
ACTTGTAGGTATTCAAAATGGCTGACAGAGAAAAAAGAGGAATTTAAGAC
TACCAAAGATATTCAAAGCCGCTTGCAACGCATCATGGAAGGCAGTAGTA
GTAGCAGGAACAGTAAACCAACCACCACCTCTGCAAGCAATTCTAGTATA
GCAGGAAAAGCTATCACTGTCGAAATTGATATCGCACCACCAGCACAAAC
TGTGACCATGACTAAATCATTAAAGCTGAAAAAATCTTCCTCGCAGAAAA
CAGTTACTCTTCAGAATAAAGACATGAAAAATGTGATATCTCACGACCAA
ACAGATGAAAAAGCTTCAATGTGCGAAGATGAATTCCCGGCGATAAGTTT
AACTAAAAATCATAATTATAGTGACAGTATAACCGATGAAAACGATGGTA
ATACGGAACAACAGACCTGTAAATCAGATATGGTTACACAAGTTCATGAA
AACCTTGGTTATAAAGCTTCTCTCGGTGGTAATAGCGAGTTTGGTAATTT
CATGCAAGCAACAGTGATCGAAATACCAAGTATAGAAGCTTCAGTAAATG
ACATTGACGATTCTAGCTCTAACAGAAATGATATGAGTGAATTATGTGCA
GGCTCATCgcataatgaaaaaaatttttctcaagaaGTCTCTAAAGATAA
TGTGAGCGCAATGGATAGTGGACTAGATACCTCGGAAAGAGGAGCGTGTG
TTTCTAATGATAAAGTAGAACTTTTACACAATGGACTAAGTATTTGTAAA
GTTAATGAAGAAAGCGGTTCCGAGAGTATTGATAATGTTTCATGTAGAGA
AAATTTAGTTGGGAAAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028233-exon-sc0000670-1491911889:130291..131561 | TCONS_00028233-exon-sc0000670-1491911889:130291..131561 | Clytia hemisphaerica | exon |
| TCONS_00028233-exon-sc0000670-1510915933:130291..131561 | TCONS_00028233-exon-sc0000670-1510915933:130291..131561 | Clytia hemisphaerica | exon |
| TCONS_00028233-exon-sc0000670-1575043694:130291..131561 | TCONS_00028233-exon-sc0000670-1575043694:130291..131561 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000670 | supercontig | sc0000670:130291..131561 . |
Blast
The following BLAST results are available for this feature:
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