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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028136 ID=TCONS_00028136|Name=TCONS_00028136|organism=Clytia hemisphaerica|type=transcript|length=499bp
AGAAATTATCGATTTATGCGAGGAGAACGGCACATTGATGGACGTACGAC
AAAAACCACAAGAAAGAGGAACCCATCTTCTGACCGATGATTATTAAGTC
GTCGTCAAAATGTTAAAGAACGACAGCCAATCACTGAACTGGATTCCTAT
CAACCAAGAATACGCGACCGACGAAGAATTCATGACGTCTTTACGAGAAT
CGTCGGTAACGAACATTCGACGAAAATCTTCATGTAGATCACGTGATCGC
TACATACGCCGAGCGCGCGGCGACTCGATGAATAAACAACGAAAACAAGG
CGTTCATCAATTTTCGTTGGCATGTGACAATCTGGCTGTGTCTAAAAATC
AGTCAAGAGGCGGATCACGGAAATTGTCGTCAATAAAGTAATGAGAGTGA
TAACAAAACAGTTAAAGTAAGAAGCAATGAGAAATCTTTCAAAGCAAAAC
TTATTTACTGACTATAGACAGAAATGGGACGTCGTCCCAGATGGGATGG Run BLAST on NCBI transcript from alignment at sc0000665:44878..45880- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028136 ID=TCONS_00028136|Name=TCONS_00028136|organism=Clytia hemisphaerica|type=transcript|length=1003bp|location=Sequence derived from alignment at sc0000665:44878..45880- (Clytia hemisphaerica)
AGAAATTATCGATTTATGCGAGGAGAACGGCACATTGATGGACGTACGAC
AAAAACCACAAGAAAGAGGAACCCATCTTCTGACCGATGATTATTAAGTC
GTCGTCAAAATGTTAAGTAAGGGAATTCCATCAAAGTCTAAATCATTTGG
CTAAAATCTAAGTTCTATACAAATTTCGTAGCAGAATTCAAAGCTTTAGC
TGATGGTTGAATTAATTTTGATCTATCATTTGATGAAGTATCGATGTTTG
TTTTGTTATCATGACATCCCCTTCTCACAGACCCTCCAGGATTTGTTCAG
CCATTTGGGTACATTTGAAGGTAAAGGATCAAAACTAGATTGGGATTTAT
ATCCAATGTTTTTATCGCTGTGGAGTCGAATTTTATTGTTCTTTAGTCAG
AAAATTCAGTGGGGATAGGAAAAATAGCAAAAACTGGCAAGTGAGGATTT
GCTTATCTGGTTATTTTCAGCGGGGACAAAAATTAGAGTGTAATTTTCCC
CTGGCGACAATATTTTGGCCAGTTTTGCCAGTGGGAGGGGGCCCCAGTGG
ATCTGCAAGAAGGGGTGTATTATGCGAAAACCCGACCTATCTGATGAATC
AACACATTTTCGACTTTTAGAGAACGACAGCCAATCACTGAACTGGATTC
CTATCAACCAAGAATACGCGACCGACGAAGAATTCATGACGTCTTTACGA
GAATCGTCGGTAACGAACATTCGACGAAAATCTTCATGTAGATCACGTGA
TCGCTACATACGCCGAGCGCGCGGCGACTCGATGAATAAACAACGAAAAC
AAGGCGTTCATCAATTTTCGTTGGCATGTGACAATCTGGCTGTGTCTAAA
AATCAGTCAAGAGGCGGATCACGGAAATTGTCGTCAATAAAGTAATGAGA
GTGATAACAAAACAGTTAAAGTAAGAAGCAATGAGAAATCTTTCAAAGCA
AAACTTATTTACTGACTATAGACAGAAATGGGACGTCGTCCCAGATGGGA
TGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028136-exon-sc0000665-1575043694:45765..45880 | TCONS_00028136-exon-sc0000665-1575043694:45765..45880 | Clytia hemisphaerica | exon |
| TCONS_00028136-exon-sc0000665-1575043694:44878..45260 | TCONS_00028136-exon-sc0000665-1575043694:44878..45260 | Clytia hemisphaerica | exon |
| TCONS_00028136-exon-sc0000665-1510915933:45765..45880 | TCONS_00028136-exon-sc0000665-1510915933:45765..45880 | Clytia hemisphaerica | exon |
| TCONS_00028136-exon-sc0000665-1510915933:44878..45260 | TCONS_00028136-exon-sc0000665-1510915933:44878..45260 | Clytia hemisphaerica | exon |
| TCONS_00028136-exon-sc0000665-1491911889:45765..45880 | TCONS_00028136-exon-sc0000665-1491911889:45765..45880 | Clytia hemisphaerica | exon |
| TCONS_00028136-exon-sc0000665-1491911889:44878..45260 | TCONS_00028136-exon-sc0000665-1491911889:44878..45260 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:44878..45880 - |
Blast
The following BLAST results are available for this feature:
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