TCONS_00056577-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00056577-protein
Unique Name	TCONS_00056577-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	327

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00056577-protein ID=TCONS_00056577-protein|Name=TCONS_00056577-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MADNFGTEVNLSDEQTGTLPPKTSLNVEFMKRTDSSASSTSSWDLLNNEP
TTVIDLGTDSPTTNKSSNENDFMETMRSKIVDEVKGQVWAAGTSHARRFF
DLYSNIDNLRPYFDVEPRDVLVRLGKSLVPIKPVKPQTVEGELYGPIMVV
FTLIALLLFSMKHSGHTVQEGTLMGTAIGVCFGYWLGGSSFYYFIAYICN
SHITLLQIVSLTGYALFAHCICIFLATITHDLTHGIFFIAILILGGLSSL
RMLGVYVSRTWSKKNGLIIGGVVAFFHLMFLIYLHYAYHSTYEEAAMLLG
RKKRAIVIQTLVEDTSTLSSQNFHVVS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_035646	XLOC_035646	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00056577	TCONS_00056577	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Blast

[Close]

BLAST of TCONS_00056577-protein vs. Swiss-Prot (Human)
Match: YIPF3 (Protein YIPF3 OS=Homo sapiens GN=YIPF3 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.516e-80
Identity = 118/222 (53.15%), Postives = 158/222 (71.17%), Query Frame = 0

Query:   73 METMRSKIVDEVKGQVWAAGTSHARRFFDLYSNIDNLRPYFDVEPRDVLVRLGKSLVPIKPVK-PQTVEGELYGPIMVVFTLIALLLFSMKHSGHTVQEGTLMGTAIGVCFGYWLGGSSFYYFIAYICNSHITLLQIVSLTGYALFAHCICIFLATITHDLTHGIFFIAILILGGLSSLRMLGVYVSRTWSKKNGLIIGGVVAFFHLMFLIYLHYAYHSTYE 293
            M+  + ++  +V  Q+W AG   A R F LY+NID LRPYFDVEP  V  RL +S++PIK V  PQ + GELYGP+M+VFTL+A+LL  MK S   ++EGTLMGTAIG CFGYWLG SSF YF+AY+CN+ IT+LQ+++L GY LF HCI +F+    H   H +F++  L++GGLS+LRM+ V VSRT      L++ G +A  H++FL+YLH+AYH   E
Sbjct:   82 MKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH--LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVVE 301

The following BLAST results are available for this feature:

BLAST of TCONS_00056577-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00056577-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
YIPF3	2.516e-80	53.15	Protein YIPF3 OS=Homo sapiens GN=YIPF3 PE=1 SV=1	[more]

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TCONS_00056577-protein (polypeptide) - C. hemisphaerica