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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027995 ID=TCONS_00027995|Name=TCONS_00027995|organism=Clytia hemisphaerica|type=transcript|length=1059bp
TCAgtattgaattttcaaattcctATGTTATGTCACACCCCTtgagattg
aaaaaaaatattttctaggttatttagatttattttcaaataaagcttCA
CACAAGGGATTTCGAGTATATACATATGAAATGTGAAAACACTATGAGtg
aaaagtgaaacaaaattgtgttttttttttcttttaaatcaatTTAACTT
TTCATTTCAATCACACACGTGTTACATTGACTTTTAAAATCGTTATAcct
aacatttttttgaaatgtacagaaaattattttcaatgtcAACATAATGA
GCCCTGATAAGATCACTTTGATATACCATTGTGTCACGTCTCCGGTAGAG
AGAAACCCTTTAAATTTCGTCTCCATcggaaaaaatgaaatattatatca
ttcccactgtaaaaacaaatcttaatttcccatccccactggatacTTGT
GATTGAAAACACTAAAAATCAATATCCCCTGTAATAAAATGAAACCATTA
GCGATACAATTCACACCGGGTcagtgaggcaggggtgtttaAGGGGTGTT
TATTAGGTTATTTTATAGGATTCGTGCATATGTTACATGCTATTTTCTAG
TCAATTTACGGGGGAATGCACAAATCTGTGCTTCCTTTCATGAAAAACGT
taagaaaaattgactttcgCAATTATTCAAAATGACTTGCAAATTTAAGC
AGTCTCTTCTATTGTTGTTGGCTTTGTCAAATTTATATCCAAATTGATGC
CCTGAACAGANatttagatttattttcaaataaagcttCACACAAGGGAT
TTCGAGTATATACATATGAAATGTGAAAACACTATGAGTGAAAAGTGAAA
CacaattgtgttttttttttcttttaaatcaatTTAACTTTTCATTTCAA
TCACACGCGTGTTACATTGACTTTTAAAATCGTTATAcctaacatttttt
tgaaatgtacagaaaattattttcaatgtcAACATAATGAGCCCTGATAA
GATCACTTTGATATACCATTGTGTCACGTCTCCGGTAGAGAGAAACCCTT
TAAATTTCG Run BLAST on NCBI transcript from alignment at sc0000660:199770..200828 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027995 ID=TCONS_00027995|Name=TCONS_00027995|organism=Clytia hemisphaerica|type=transcript|length=1059bp|location=Sequence derived from alignment at sc0000660:199770..200828 (Clytia hemisphaerica)
CGAAATTTAAAGGGTTTCTCTCTACCGGAGACGTGACACAATGGTATATC
AAAGTGATCTTATCAGGGCTCATTATGTTgacattgaaaataattttctg
tacatttcaaaaaaatgttaggTATAACGATTTTAAAAGTCAATGTAACA
CGCGTGTGATTGAAATGAAAAGTTAAattgatttaaaagaaaaaaaaaac
acaattgtGTTTCACTTTTCACTCATAGTGTTTTCACATTTCATATGTAT
ATACTCGAAATCCCTTGTGTGaagctttatttgaaaataaatctaaatNT
CTGTTCAGGGCATCAATTTGGATATAAATTTGACAAAGCCAACAACAATA
GAAGAGACTGCTTAAATTTGCAAGTCATTTTGAATAATTGcgaaagtcaa
tttttcttaACGTTTTTCATGAAAGGAAGCACAGATTTGTGCATTCCCCC
GTAAATTGACTAGAAAATAGCATGTAACATATGCACGAATCCTATAAAAT
AACCTAATAAACACCCCTtaaacacccctgcctcactgACCCGGTGTGAA
TTGTATCGCTAATGGTTTCATTTTATTACAGGGGATATTGATTTTTAGTG
TTTTCAATCACAAgtatccagtggggatgggaaattaagatttgttttta
cagtgggaatgatataatatttcattttttccgATGGAGACGAAATTTAA
AGGGTTTCTCTCTACCGGAGACGTGACACAATGGTATATCAAAGTGATCT
TATCAGGGCTCATTATGTTgacattgaaaataattttctgtacatttcaa
aaaaatgttaggTATAACGATTTTAAAAGTCAATGTAACACGTGTGTGAT
TGAAATGAAAAGTTAAattgatttaaaagaaaaaaaaaacacaattttgt
ttcacttttcaCTCATAGTGTTTTCACATTTCATATGTATATACTCGAAA
TCCCTTGTGTGaagctttatttgaaaataaatctaaataacctagaaaat
attttttttcaatctcaAGGGGTGTGACATAACATaggaatttgaaaatt
caatacTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027995-exon-sc0000660-1491911889:199770..200828 | TCONS_00027995-exon-sc0000660-1491911889:199770..200828 | Clytia hemisphaerica | exon |
| TCONS_00027995-exon-sc0000660-1510915933:199770..200828 | TCONS_00027995-exon-sc0000660-1510915933:199770..200828 | Clytia hemisphaerica | exon |
| TCONS_00027995-exon-sc0000660-1575043694:199770..200828 | TCONS_00027995-exon-sc0000660-1575043694:199770..200828 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000660 | supercontig | sc0000660:199770..200828 . |
Blast
The following BLAST results are available for this feature:
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